| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85858220
Identifier: 85858220
GI number: 85858220
Start: 374535
End: 375053
Strand: Direct
Name: 85858220
Synonym: SYN_01152
Alternate gene names: NA
Gene position: 374535-375053 (Clockwise)
Preceding gene: 85858219
Following gene: 85858221
Centisome position: 11.78
GC content: 51.06
Gene sequence:
>519_bases ATGAAAGAATCAAGTAATTGCCAGATACCCTGCCTGCCTGAAATGGCTGAAGGGGAAGCAGCGGTCGGTCCGCAGCCTTT TATCATGGTTGTCAAAAGGAAGCTGGCCAAGCCGTGGAATTATTGTTTCAAGAACAGGCTGAAAAAATATTTTGCCTTCT TCCGCAAAGGGGGCGGTGCGCCTGTCGAGATAAACACGTCTTCCGGCTTGAAGGCGGGAGACCTTGTTCGTGTTCGCCCC CCTGAGGACATCAAGGGGTCGCTTGATTCCTTTAATGAGCTCAAGGGATGCGCCTTTCTCGAATCCATGTGGCAATACTG CGGGACGACGCAACGGGTGCTCAAGCCCCTGGAGAAATTTCTGGACGAGCGTGATTACAAGGTTAAAAAATGCAGAGGAA TCGTCATTTTAGAGGGGGTCATCTGTAACGGCACCCCGGTCTTCGGCCGCTGCGACCGTTGCTGTCATTTGTTCTGGAGA GAAGAGTGGCTGGAAAAGATCGGTGAATCAGAGAAATAA
Upstream 100 bases:
>100_bases GGCCAGAGAAAAAATCCTTCATCGTTCCTATGCGGACCAGGTCTGAAAAAAGGTCGTAATTCAATCTGACAGTCGACTCC TTCGCCCTGAAAAAAACATC
Downstream 100 bases:
>100_bases CGAATTCATTATTACAATGACTCCGCAGACCTGAAACGGAGGATAAAATTCATTGTTCGAGACAGGCATGACCAATCGAA TCAAGGAGGATGGACATGGT
Product: cytoplasmic protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MKESSNCQIPCLPEMAEGEAAVGPQPFIMVVKRKLAKPWNYCFKNRLKKYFAFFRKGGGAPVEINTSSGLKAGDLVRVRP PEDIKGSLDSFNELKGCAFLESMWQYCGTTQRVLKPLEKFLDERDYKVKKCRGIVILEGVICNGTPVFGRCDRCCHLFWR EEWLEKIGESEK
Sequences:
>Translated_172_residues MKESSNCQIPCLPEMAEGEAAVGPQPFIMVVKRKLAKPWNYCFKNRLKKYFAFFRKGGGAPVEINTSSGLKAGDLVRVRP PEDIKGSLDSFNELKGCAFLESMWQYCGTTQRVLKPLEKFLDERDYKVKKCRGIVILEGVICNGTPVFGRCDRCCHLFWR EEWLEKIGESEK >Mature_172_residues MKESSNCQIPCLPEMAEGEAAVGPQPFIMVVKRKLAKPWNYCFKNRLKKYFAFFRKGGGAPVEINTSSGLKAGDLVRVRP PEDIKGSLDSFNELKGCAFLESMWQYCGTTQRVLKPLEKFLDERDYKVKKCRGIVILEGVICNGTPVFGRCDRCCHLFWR EEWLEKIGESEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19636; Mature: 19636
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 8.1 %Cys+Met (Translated Protein) 5.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 8.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKESSNCQIPCLPEMAEGEAAVGPQPFIMVVKRKLAKPWNYCFKNRLKKYFAFFRKGGGA CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC PVEINTSSGLKAGDLVRVRPPEDIKGSLDSFNELKGCAFLESMWQYCGTTQRVLKPLEKF CEEEECCCCCCCCCEEECCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LDERDYKVKKCRGIVILEGVICNGTPVFGRCDRCCHLFWREEWLEKIGESEK HCCCCCHHHHHCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MKESSNCQIPCLPEMAEGEAAVGPQPFIMVVKRKLAKPWNYCFKNRLKKYFAFFRKGGGA CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCC PVEINTSSGLKAGDLVRVRPPEDIKGSLDSFNELKGCAFLESMWQYCGTTQRVLKPLEKF CEEEECCCCCCCCCEEECCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH LDERDYKVKKCRGIVILEGVICNGTPVFGRCDRCCHLFWREEWLEKIGESEK HCCCCCHHHHHCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA