| Definition | Syntrophus aciditrophicus SB chromosome, complete genome. |
|---|---|
| Accession | NC_007759 |
| Length | 3,179,300 |
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The map label for this gene is 85858199
Identifier: 85858199
GI number: 85858199
Start: 350294
End: 351166
Strand: Direct
Name: 85858199
Synonym: SYN_00516
Alternate gene names: NA
Gene position: 350294-351166 (Clockwise)
Preceding gene: 85858198
Following gene: 85858200
Centisome position: 11.02
GC content: 54.41
Gene sequence:
>873_bases GTGAAGCGCATCGTCATCTGTCTTCTGGGATTGATCCTCCTGTTCTGTTATGCAACCGAGGCCTTTTCCGGGGAGAAGAC CATTGTCAAGATCGGTGAGGATGTTTTCATTCAGGAAGGCCGGCGGGTCCACAATGTGATTGCCTTCGGAGGGCAGGTCA CCGTTTCAGGGACCGTAACCTCTCATGTTGTTGCGGTAGGGGGCTCCGTCGTTCTGACCAGAACGGCCGCAATCGGCGGG GATGTCGTCTGTCTGGGAGGCGTTGTTGTGCTGGGCAAAGGGGCTCAAATTAACGGCACGCTGACTGAAATCAATTCCTC CAATCTTTCCGAAGCGATTTCCGATGTTCTGAATGACAACTGGGAGGGATGGTCCTGGATCTTTACGATCATTTCCATTC TGGTTTTTGCCGGCTTTCTGATTCTGGCCCTGTTGATCATCACCCTGATACCGAAACCGGTTCATCGGATTTCTCAAGCC ATTCAGGGGCATCTGATTCAGGTGGGGCTCTGGGGTATTCTGGTGCTGATCCTTGTTGTTCCTCTTGCGTTATTGTTGAC CCTTTCCGTTGTGGGCATCGTTCTTGTTCCCCTGGAAATGACGCTCGTTGTCTGTGCGGCGCTTCTTGGACTGGTTGCCG TCGCCCGGCTGATCGGTATGATGCTGCTGGCACTGTTCAAGAAAAACACGGCGAAGCCGCTCTGGGAGACTTTCTGGGGC TTGCTTCTGCTGTGGATCGTGGGCTGGATTCCTGTTTTAGGCTGGATGATCAAGATCCTTGCCCTGGTCATCGGCATCGG GGGCGTTTTCGCTACCCGATTCGGCACCCATTCATTGCCCCCCCGCCGGGTTGCCTCTCCGGATACCACGTAA
Upstream 100 bases:
>100_bases GGAGATGACAGCCGGTTAAAAAAAATTCTACACCGGCCTATTCGTGAGAATGAGGCAATAATCTGCTTATGAGAATTTCA CCGTCTGGGAGAAGGAAAAA
Downstream 100 bases:
>100_bases TCGGCGCCCGTGCTTACCTCCTTTTCTGCCGTTGTGTTAATCCCCTTTCCGATCAGAGATGATGCCCAGTCAACGATGTG GAAGCGTGGCGCATCCAGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MKRIVICLLGLILLFCYATEAFSGEKTIVKIGEDVFIQEGRRVHNVIAFGGQVTVSGTVTSHVVAVGGSVVLTRTAAIGG DVVCLGGVVVLGKGAQINGTLTEINSSNLSEAISDVLNDNWEGWSWIFTIISILVFAGFLILALLIITLIPKPVHRISQA IQGHLIQVGLWGILVLILVVPLALLLTLSVVGIVLVPLEMTLVVCAALLGLVAVARLIGMMLLALFKKNTAKPLWETFWG LLLLWIVGWIPVLGWMIKILALVIGIGGVFATRFGTHSLPPRRVASPDTT
Sequences:
>Translated_290_residues MKRIVICLLGLILLFCYATEAFSGEKTIVKIGEDVFIQEGRRVHNVIAFGGQVTVSGTVTSHVVAVGGSVVLTRTAAIGG DVVCLGGVVVLGKGAQINGTLTEINSSNLSEAISDVLNDNWEGWSWIFTIISILVFAGFLILALLIITLIPKPVHRISQA IQGHLIQVGLWGILVLILVVPLALLLTLSVVGIVLVPLEMTLVVCAALLGLVAVARLIGMMLLALFKKNTAKPLWETFWG LLLLWIVGWIPVLGWMIKILALVIGIGGVFATRFGTHSLPPRRVASPDTT >Mature_290_residues MKRIVICLLGLILLFCYATEAFSGEKTIVKIGEDVFIQEGRRVHNVIAFGGQVTVSGTVTSHVVAVGGSVVLTRTAAIGG DVVCLGGVVVLGKGAQINGTLTEINSSNLSEAISDVLNDNWEGWSWIFTIISILVFAGFLILALLIITLIPKPVHRISQA IQGHLIQVGLWGILVLILVVPLALLLTLSVVGIVLVPLEMTLVVCAALLGLVAVARLIGMMLLALFKKNTAKPLWETFWG LLLLWIVGWIPVLGWMIKILALVIGIGGVFATRFGTHSLPPRRVASPDTT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30964; Mature: 30964
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRIVICLLGLILLFCYATEAFSGEKTIVKIGEDVFIQEGRRVHNVIAFGGQVTVSGTVT CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCHHHHHHCCHHHHHHHHCCCEEEEECHHH SHVVAVGGSVVLTRTAAIGGDVVCLGGVVVLGKGAQINGTLTEINSSNLSEAISDVLNDN HHHHHHCCCHHEEEHHHCCCCEEEECCEEEECCCCCCCCHHHHCCCCHHHHHHHHHHCCC WEGWSWIFTIISILVFAGFLILALLIITLIPKPVHRISQAIQGHLIQVGLWGILVLILVV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLALLLTLSVVGIVLVPLEMTLVVCAALLGLVAVARLIGMMLLALFKKNTAKPLWETFWG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH LLLLWIVGWIPVLGWMIKILALVIGIGGVFATRFGTHSLPPRRVASPDTT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKRIVICLLGLILLFCYATEAFSGEKTIVKIGEDVFIQEGRRVHNVIAFGGQVTVSGTVT CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCHHHHHHCCHHHHHHHHCCCEEEEECHHH SHVVAVGGSVVLTRTAAIGGDVVCLGGVVVLGKGAQINGTLTEINSSNLSEAISDVLNDN HHHHHHCCCHHEEEHHHCCCCEEEECCEEEECCCCCCCCHHHHCCCCHHHHHHHHHHCCC WEGWSWIFTIISILVFAGFLILALLIITLIPKPVHRISQAIQGHLIQVGLWGILVLILVV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLALLLTLSVVGIVLVPLEMTLVVCAALLGLVAVARLIGMMLLALFKKNTAKPLWETFWG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH LLLLWIVGWIPVLGWMIKILALVIGIGGVFATRFGTHSLPPRRVASPDTT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA