Click here to switch to the map view.

The map label for this gene is yffB [H]

Identifier: 85375732

GI number: 85375732

Start: 2924608

End: 2924961

Strand: Direct

Name: yffB [H]

Synonym: ELI_14525

Alternate gene names: 85375732

Gene position: 2924608-2924961 (Clockwise)

Preceding gene: 85375731

Following gene: 85375733

Centisome position: 95.81

GC content: 60.73

Gene sequence:

>354_bases
ATGACGATCCATCTCTACGGCATACCCAATTGCGACACCGTCAAGAAGGCCCGTAAGTGGCTGGATGCGCAGGGGCTCGA
GTACGATTTCCACGACTACAAGAAGGAAGGAGCCGAGCGCGCCAAGCTCGAACGCTGGGCTGACGCTGTGGGCTGGGAGG
TTCTGCTCAACCGTCGGGGCACGACCTTTCGCAAGCTCGACGATGCCGACAAGGCGGATATCGATCGCGACAAGGCGATC
GCGCTGATGCTGGAGCATACCAGCCTGATCAAGCGACCGGTCGCCGAGCATGAGGACGGCGAGCGCATCCTCATCGGCTT
CAACGACAGCGAGTGGGAGAATGCCTGGTGCTGA

Upstream 100 bases:

>100_bases
CCCTCCAGAGTGAAACGCATCCAAGGCGCCAAGGCGAAACTTTCTCCCCCCGGACAGTGGTCCATGCGGTCCATGTCTCC
CAACACAACACAGGTTTCCG

Downstream 100 bases:

>100_bases
GGTTTTGCGCGGCGGCCCTCCTGACGCTCCTCGCGACGCCCGGCATGGCGCTGGACGAGGATTTCCTCGTCATCGCCCAT
CGCGGCGCCAGCGGCGAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 117; Mature: 116

Protein sequence:

>117_residues
MTIHLYGIPNCDTVKKARKWLDAQGLEYDFHDYKKEGAERAKLERWADAVGWEVLLNRRGTTFRKLDDADKADIDRDKAI
ALMLEHTSLIKRPVAEHEDGERILIGFNDSEWENAWC

Sequences:

>Translated_117_residues
MTIHLYGIPNCDTVKKARKWLDAQGLEYDFHDYKKEGAERAKLERWADAVGWEVLLNRRGTTFRKLDDADKADIDRDKAI
ALMLEHTSLIKRPVAEHEDGERILIGFNDSEWENAWC
>Mature_116_residues
TIHLYGIPNCDTVKKARKWLDAQGLEYDFHDYKKEGAERAKLERWADAVGWEVLLNRRGTTFRKLDDADKADIDRDKAIA
LMLEHTSLIKRPVAEHEDGERILIGFNDSEWENAWC

Specific function: Unknown

COG id: COG1393

COG function: function code P; Arsenate reductase and related proteins, glutaredoxin family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ArsC family [H]

Homologues:

Organism=Escherichia coli, GI1788815, Length=112, Percent_Identity=47.3214285714286, Blast_Score=107, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006660
- InterPro:   IPR012336
- InterPro:   IPR012335
- InterPro:   IPR006504 [H]

Pfam domain/function: PF03960 ArsC [H]

EC number: NA

Molecular weight: Translated: 13645; Mature: 13514

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIHLYGIPNCDTVKKARKWLDAQGLEYDFHDYKKEGAERAKLERWADAVGWEVLLNRRG
CEEEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TTFRKLDDADKADIDRDKAIALMLEHTSLIKRPVAEHEDGERILIGFNDSEWENAWC
CCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCC
>Mature Secondary Structure 
TIHLYGIPNCDTVKKARKWLDAQGLEYDFHDYKKEGAERAKLERWADAVGWEVLLNRRG
EEEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
TTFRKLDDADKADIDRDKAIALMLEHTSLIKRPVAEHEDGERILIGFNDSEWENAWC
CCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1644752; 9205837; 9278503; 10493123 [H]