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The map label for this gene is ydbB [H]

Identifier: 85375103

GI number: 85375103

Start: 2302563

End: 2302931

Strand: Direct

Name: ydbB [H]

Synonym: ELI_11380

Alternate gene names: 85375103

Gene position: 2302563-2302931 (Clockwise)

Preceding gene: 85375102

Following gene: 85375104

Centisome position: 75.43

GC content: 60.7

Gene sequence:

>369_bases
ATGGCGGGCGCTGCCCCCACCAAAGTCGTGCTCGGTGAAAAGTTTGCCGCCTTCAGCGAGCAGTGGTCCCCCAAGATCGT
CGCCCGTTTCAACGGCAACGAAGTGCGGTTGTGCAAACTCGAAGGCGACTTTCACTGGCACCAGCACGACGAGACCGACG
AGATGTTTCTTGTCGTGGAAGGCGAACTGGAGATCGACTTCGTCGACCGGACCGAAACGCTCAAGGCAGGCGAAATGATT
GTCGTCCCGCGCGGCACGGAACATCGCCCCCGCGCCCCACGCGGCGAAGCCAAGGTGTTCGTGATGGATGCCGCTGATAC
ACCCAACACAGGCAATAAAGCGACCGCCACCAAGGCCGTCGATCTGTAG

Upstream 100 bases:

>100_bases
TCGACCCGATGATCACGCACCGATTGAGCCTCGACGAGATCAACAAAGGCTTCGACCTGATGCATGCGGGTGAGAGCATT
CGCGCCGTAGTAGTCTATTG

Downstream 100 bases:

>100_bases
GAGAGAAAGATCCATGTTCAGCCATGTCATGATCGGAGCGGATGATCTCGATGCCGCCAAGACTTTCTACGATGCCTGTT
TCAAGGCCCTCGGTGGCCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 122; Mature: 121

Protein sequence:

>122_residues
MAGAAPTKVVLGEKFAAFSEQWSPKIVARFNGNEVRLCKLEGDFHWHQHDETDEMFLVVEGELEIDFVDRTETLKAGEMI
VVPRGTEHRPRAPRGEAKVFVMDAADTPNTGNKATATKAVDL

Sequences:

>Translated_122_residues
MAGAAPTKVVLGEKFAAFSEQWSPKIVARFNGNEVRLCKLEGDFHWHQHDETDEMFLVVEGELEIDFVDRTETLKAGEMI
VVPRGTEHRPRAPRGEAKVFVMDAADTPNTGNKATATKAVDL
>Mature_121_residues
AGAAPTKVVLGEKFAAFSEQWSPKIVARFNGNEVRLCKLEGDFHWHQHDETDEMFLVVEGELEIDFVDRTETLKAGEMIV
VPRGTEHRPRAPRGEAKVFVMDAADTPNTGNKATATKAVDL

Specific function: Unknown

COG id: COG0662

COG function: function code G; Mannose-6-phosphate isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SchB/CurC family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013096
- InterPro:   IPR011051
- InterPro:   IPR019780
- InterPro:   IPR014710 [H]

Pfam domain/function: PF07883 Cupin_2 [H]

EC number: NA

Molecular weight: Translated: 13524; Mature: 13393

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGAAPTKVVLGEKFAAFSEQWSPKIVARFNGNEVRLCKLEGDFHWHQHDETDEMFLVVE
CCCCCCCEEEECCCHHHCCCCCCCEEEEEECCCEEEEEEEECCEEECCCCCCCCEEEEEE
GELEIDFVDRTETLKAGEMIVVPRGTEHRPRAPRGEAKVFVMDAADTPNTGNKATATKAV
CCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEE
DL
CC
>Mature Secondary Structure 
AGAAPTKVVLGEKFAAFSEQWSPKIVARFNGNEVRLCKLEGDFHWHQHDETDEMFLVVE
CCCCCCEEEECCCHHHCCCCCCCEEEEEECCCEEEEEEEECCEEECCCCCCCCEEEEEE
GELEIDFVDRTETLKAGEMIVVPRGTEHRPRAPRGEAKVFVMDAADTPNTGNKATATKAV
CCEEEEEECCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCEEEEEE
DL
CC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]