Definition | Erythrobacter litoralis HTCC2594 chromosome, complete genome. |
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Accession | NC_007722 |
Length | 3,052,398 |
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The map label for this gene is 85375066
Identifier: 85375066
GI number: 85375066
Start: 2261681
End: 2262343
Strand: Direct
Name: 85375066
Synonym: ELI_11195
Alternate gene names: NA
Gene position: 2261681-2262343 (Clockwise)
Preceding gene: 85375065
Following gene: 85375067
Centisome position: 74.1
GC content: 65.76
Gene sequence:
>663_bases GTGGCGATTCCCGGCGTGATCGACGACAATGCCAGCGAGGAAGCCGGGCGCAACGAGCCGCGCCGCTTCGTTCGCCTGCT GACCGAAGGCATCCGCACCGGGGGCGAAACCGCCAGCCTGCGCCTGCACAATATTTCCGTCGGCGGACTGATGATCGAAA GCCCGGTCGACTTCGAGGTCGGAGAGGAACTCGCCATCGACCTTCCGGATGTCGGGCCGACCGACGCAAAGATCGTGTGG CGCAGCGAAACGCTCTACGGCGCGCGCTTCGTCGAGCCGCTGCCGCAGAAGGCGCTGAGTGCCGCCAAGTTGAAGAGCGC CATCGCGCAGCCCGATGCGGCCATCCTTCCGCCCGGAATCGACCGGGCATCTTTGGGCAAGCGGCTCGCCACCATGCGCC AGGAGCGCGGCCTGACCCTTGCGCAGGTGGCGGAAGAGCTAGGCGTCAGCAAGCCGACGGTGTGGGCGTGGGAGCACGAC CGCTCCCAGCCGGTCGCCAGCCGCATCTCGGCGATCGCGGAAGTTCTTGGGGTCAGCGAGATCGAACTGGCGACGGGTCG CGACACCAGCCAGGCCGAGCACGCCATTGCAGAGACACGCGAAATGATCGCCAAAGCCTATGGTTGCACGCCGCAACAGG TCCGAATTTCGATAGATTTGTGA
Upstream 100 bases:
>100_bases GCTCGATGCGAGGGCAACTCACCCGCGTTAAGCGCACCTCCTAACCCGGTCTTAACTCTGCCGGTCCGAGCCTGCCTCCT CAATTGAAGGAGATGCAAGC
Downstream 100 bases:
>100_bases GCCAAGGGTTCTCAAATTTCTCTTTTATAGTTAATACCAGTCAAGTCGATTCTAAATTTAGGGGATTTAGTTAAGTCGAC TAACAGGTAAGATAATAAAT
Product: DNA-binding protein, putative
Products: NA
Alternate protein names: Xre-Family Transcriptional Regulator
Number of amino acids: Translated: 220; Mature: 219
Protein sequence:
>220_residues MAIPGVIDDNASEEAGRNEPRRFVRLLTEGIRTGGETASLRLHNISVGGLMIESPVDFEVGEELAIDLPDVGPTDAKIVW RSETLYGARFVEPLPQKALSAAKLKSAIAQPDAAILPPGIDRASLGKRLATMRQERGLTLAQVAEELGVSKPTVWAWEHD RSQPVASRISAIAEVLGVSEIELATGRDTSQAEHAIAETREMIAKAYGCTPQQVRISIDL
Sequences:
>Translated_220_residues MAIPGVIDDNASEEAGRNEPRRFVRLLTEGIRTGGETASLRLHNISVGGLMIESPVDFEVGEELAIDLPDVGPTDAKIVW RSETLYGARFVEPLPQKALSAAKLKSAIAQPDAAILPPGIDRASLGKRLATMRQERGLTLAQVAEELGVSKPTVWAWEHD RSQPVASRISAIAEVLGVSEIELATGRDTSQAEHAIAETREMIAKAYGCTPQQVRISIDL >Mature_219_residues AIPGVIDDNASEEAGRNEPRRFVRLLTEGIRTGGETASLRLHNISVGGLMIESPVDFEVGEELAIDLPDVGPTDAKIVWR SETLYGARFVEPLPQKALSAAKLKSAIAQPDAAILPPGIDRASLGKRLATMRQERGLTLAQVAEELGVSKPTVWAWEHDR SQPVASRISAIAEVLGVSEIELATGRDTSQAEHAIAETREMIAKAYGCTPQQVRISIDL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23697; Mature: 23566
Theoretical pI: Translated: 4.77; Mature: 4.77
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIPGVIDDNASEEAGRNEPRRFVRLLTEGIRTGGETASLRLHNISVGGLMIESPVDFEV CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCEEECCCCCCCC GEELAIDLPDVGPTDAKIVWRSETLYGARFVEPLPQKALSAAKLKSAIAQPDAAILPPGI CCEEEEECCCCCCCCCEEEEECCCHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCC DRASLGKRLATMRQERGLTLAQVAEELGVSKPTVWAWEHDRSQPVASRISAIAEVLGVSE CHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCC IELATGRDTSQAEHAIAETREMIAKAYGCTPQQVRISIDL EEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC >Mature Secondary Structure AIPGVIDDNASEEAGRNEPRRFVRLLTEGIRTGGETASLRLHNISVGGLMIESPVDFEV CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCEEECCCCCCCC GEELAIDLPDVGPTDAKIVWRSETLYGARFVEPLPQKALSAAKLKSAIAQPDAAILPPGI CCEEEEECCCCCCCCCEEEEECCCHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCCCCC DRASLGKRLATMRQERGLTLAQVAEELGVSKPTVWAWEHDRSQPVASRISAIAEVLGVSE CHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCC IELATGRDTSQAEHAIAETREMIAKAYGCTPQQVRISIDL EEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA