Definition | Erythrobacter litoralis HTCC2594 chromosome, complete genome. |
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Accession | NC_007722 |
Length | 3,052,398 |
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The map label for this gene is 85374962
Identifier: 85374962
GI number: 85374962
Start: 2161258
End: 2162055
Strand: Direct
Name: 85374962
Synonym: ELI_10675
Alternate gene names: NA
Gene position: 2161258-2162055 (Clockwise)
Preceding gene: 85374958
Following gene: 85374963
Centisome position: 70.81
GC content: 60.03
Gene sequence:
>798_bases GTGGCGCTCGAGTATCAAATCACGCCCGACGCTTTGCTCTACGCCTCGGTTTCGCGAGGCTTCAAAAGCGGCACCTACAA TGTCGGCGGCGTGCAGCCGCCCGTGAAGCCGGAGAAGGTCACGGCCTATGAAGGGGGCCTGAAATCGGAATTCCTCGATC GGCGGCTCCGCATAAATCTTGCCGGCTTTTATTATGATTACAAGGATCTCCAGGTCGGCAAGGTGGTCAACGCGTCACTC GCGCTGGAGAATGCGGCGACAGCGACGATCTACGGTGCCGAGCTCGAGTTGCGCGCGCGCCCCACGCCCGACTTAGAACT GGGTCTGACCGGCTCCTATCTCAACGCCAAGTTCGACAGTTTCATCAGTATCGATCCCGCGCGACCCGGAGGTGACGGGC GCACCGTCGACCCGGCGACCGGCGCACCGGCTTTCAACAACGCCGGCAACCGCCTGCCGCAAGCCCCCAAATGGACGGTC GACGCCATGGCACAATATACCGTGCGCTCGGACCATGGATCCTTTGCCCTTCGCGGAGAGGTCTTGTGGGTCGATAAGGT CTATTTCAGTGCCTTCAACGTTCCGCAGGTGTCGCAGCCGGCAAAGACCAAGCTCAATGCCTCGCTGATCTACACCGATC CGGGCGATCGCTGGAGCGTGACCGTCTACGGCAAGAATCTCGCCAACAAGACGTACATCTCAAACGCCTTTGTCAGCTCC AGCATCGTGGGATTTGGCGTCAACGGCTTCCTCGAGGAGCCGCGAACCTATGGCGTGACCATCGGGTATAAGTTCTAG
Upstream 100 bases:
>100_bases GCCCGCCAATCCCGTCGCGCCGCTCGCCCAGTGCGGAGCCGATATCCCATCGGTCCCGACCTGCCAACCGCACAAGACCT TCCGATCCTTCACGCCGAAA
Downstream 100 bases:
>100_bases CCGGGAATATATTCTCATGATCACGATTCCCACCGCCGAGTCCATCATCGACATTTCGATGCCCATCGAGAATGATATCG TATCGGATCCGGCGGCCTTT
Product: TonB-dependent receptor
Products: NA
Alternate protein names: NB-Dependent Receptor-Like Protein; NB-Dependent Receptor Plug; NB-Dependent Receptor Domain Protein; NB Dependent Receptor; NB-Dependent Receptor Protein; NB-Dependent Siderophore Receptor; Outer Membrane Protein; Receptor -Mostly Fe Transport; NB Dependent Receptor Protein; NB-Dependent Receptor Plug Domain Protein; Nb-Dependent Outer Membrane Receptor Protein; Helix-Turn-Helix AraC Type; Outer Membrane Receptor Family Protein; Nb-Dependent Receptor; NB-Dependent Siderophore Receptor Protein
Number of amino acids: Translated: 265; Mature: 264
Protein sequence:
>265_residues MALEYQITPDALLYASVSRGFKSGTYNVGGVQPPVKPEKVTAYEGGLKSEFLDRRLRINLAGFYYDYKDLQVGKVVNASL ALENAATATIYGAELELRARPTPDLELGLTGSYLNAKFDSFISIDPARPGGDGRTVDPATGAPAFNNAGNRLPQAPKWTV DAMAQYTVRSDHGSFALRGEVLWVDKVYFSAFNVPQVSQPAKTKLNASLIYTDPGDRWSVTVYGKNLANKTYISNAFVSS SIVGFGVNGFLEEPRTYGVTIGYKF
Sequences:
>Translated_265_residues MALEYQITPDALLYASVSRGFKSGTYNVGGVQPPVKPEKVTAYEGGLKSEFLDRRLRINLAGFYYDYKDLQVGKVVNASL ALENAATATIYGAELELRARPTPDLELGLTGSYLNAKFDSFISIDPARPGGDGRTVDPATGAPAFNNAGNRLPQAPKWTV DAMAQYTVRSDHGSFALRGEVLWVDKVYFSAFNVPQVSQPAKTKLNASLIYTDPGDRWSVTVYGKNLANKTYISNAFVSS SIVGFGVNGFLEEPRTYGVTIGYKF >Mature_264_residues ALEYQITPDALLYASVSRGFKSGTYNVGGVQPPVKPEKVTAYEGGLKSEFLDRRLRINLAGFYYDYKDLQVGKVVNASLA LENAATATIYGAELELRARPTPDLELGLTGSYLNAKFDSFISIDPARPGGDGRTVDPATGAPAFNNAGNRLPQAPKWTVD AMAQYTVRSDHGSFALRGEVLWVDKVYFSAFNVPQVSQPAKTKLNASLIYTDPGDRWSVTVYGKNLANKTYISNAFVSSS IVGFGVNGFLEEPRTYGVTIGYKF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28839; Mature: 28708
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: PS01156 TONB_DEPENDENT_REC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALEYQITPDALLYASVSRGFKSGTYNVGGVQPPVKPEKVTAYEGGLKSEFLDRRLRINL CEEEEEECCCCEEHHHHHCCCCCCCEECCCCCCCCCCCEEEEECCCCHHHHHCCEEEEEE AGFYYDYKDLQVGKVVNASLALENAATATIYGAELELRARPTPDLELGLTGSYLNAKFDS EEEEEECCCEEECCEEEEEEEECCCCEEEEEECEEEEECCCCCCEEEEEECCHHCCCCCC FISIDPARPGGDGRTVDPATGAPAFNNAGNRLPQAPKWTVDAMAQYTVRSDHGSFALRGE EEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCEEHHHHEEEEEECCCCCEEEEEE VLWVDKVYFSAFNVPQVSQPAKTKLNASLIYTDPGDRWSVTVYGKNLANKTYISNAFVSS EEEEEEEEEEEECCCCCCCCCHHCCCEEEEEECCCCEEEEEEEECCCCCCEEEHHHHHHC SIVGFGVNGFLEEPRTYGVTIGYKF CEEEECCCCHHCCCCEEEEEEEEEC >Mature Secondary Structure ALEYQITPDALLYASVSRGFKSGTYNVGGVQPPVKPEKVTAYEGGLKSEFLDRRLRINL EEEEEECCCCEEHHHHHCCCCCCCEECCCCCCCCCCCEEEEECCCCHHHHHCCEEEEEE AGFYYDYKDLQVGKVVNASLALENAATATIYGAELELRARPTPDLELGLTGSYLNAKFDS EEEEEECCCEEECCEEEEEEEECCCCEEEEEECEEEEECCCCCCEEEEEECCHHCCCCCC FISIDPARPGGDGRTVDPATGAPAFNNAGNRLPQAPKWTVDAMAQYTVRSDHGSFALRGE EEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCEEHHHHEEEEEECCCCCEEEEEE VLWVDKVYFSAFNVPQVSQPAKTKLNASLIYTDPGDRWSVTVYGKNLANKTYISNAFVSS EEEEEEEEEEEECCCCCCCCCHHCCCEEEEEECCCCEEEEEEEECCCCCCEEEHHHHHHC SIVGFGVNGFLEEPRTYGVTIGYKF CEEEECCCCHHCCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA