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The map label for this gene is 85374913

Identifier: 85374913

GI number: 85374913

Start: 2116911

End: 2117246

Strand: Direct

Name: 85374913

Synonym: ELI_10430

Alternate gene names: NA

Gene position: 2116911-2117246 (Clockwise)

Preceding gene: 85374911

Following gene: 85374916

Centisome position: 69.35

GC content: 58.63

Gene sequence:

>336_bases
ATGCCGATCGAGCGAAATCCTTGCGTCTATATTGTTGCGAGCCAACCTCGCGGCACGCTCTACATCGGCGTAACATCCGA
CCTTATGCAGCGGCTGGCCCAGCATCGGTCGGGTGAGACCGGCGGGTTCACATCCCGATACGGAGTTTTCCGCCTCGTCC
GCTTTGAAATGTTCGGCGACATGGAAGCCGCGATCCTGCGAGAGAAGCAACTCAAGCGCTGGCGTCGGCAATGGAAGATC
AACCTGATCGAAGGCGATAACCCGCAGTGGCTCGATCTGGGGGTCAACCTCGGATTCGACCCGATCAAGCCGAGCGATAC
GCGAGATGGATCCTGA

Upstream 100 bases:

>100_bases
TGGCGATCGGGCGTGTGGAGGGGGATGGGGTCGGTCACACCACCCCCATATCGTCATGCTGAACTTGTTTCAGCATCCAT
GGTGCGGCAATCACCGAAGC

Downstream 100 bases:

>100_bases
AACGAGTTCAGGATGACGGGCTCGAAGGGTGGTAGCGAGCGCCTTCAAAACGGGTTCACCGTATAGCCCTCGCCCTGCAA
TACGGCATGCGCGGTCATCG

Product: endonuclease

Products: NA

Alternate protein names: Excinuclease ABC C Subunit Domain Protein; Endonuclease; Excinuclease ABC Subunit C Domain-Containing Protein; Excinuclease ABC C Subunit; Excinuclease ABC C Subunit Domain-Containing Protein; Excinuclease ABC C Subunit-Like Protein; Endo/Excinuclease Amino Terminal Domain-Containing Protein; Endonuclease Containing A URI Domain; Endo/Excinuclease Amino Terminal Domain Protein; GIY-YIG Catalytic Domain-Containing Protein; Endonuclease Protein; Crossover Junction Endodeoxyribonuclease RuvC; Excinuclease ABC; Endo/Excinuclease; GIY-YIG Endonuclease Domain-Containing Protein; Excinuclease ABCsubunit C Domain-Containing Protein; Excinuclease ABC C Subunit N-Terminal; GIY-YIG Catalytic Domain Protein

Number of amino acids: Translated: 111; Mature: 110

Protein sequence:

>111_residues
MPIERNPCVYIVASQPRGTLYIGVTSDLMQRLAQHRSGETGGFTSRYGVFRLVRFEMFGDMEAAILREKQLKRWRRQWKI
NLIEGDNPQWLDLGVNLGFDPIKPSDTRDGS

Sequences:

>Translated_111_residues
MPIERNPCVYIVASQPRGTLYIGVTSDLMQRLAQHRSGETGGFTSRYGVFRLVRFEMFGDMEAAILREKQLKRWRRQWKI
NLIEGDNPQWLDLGVNLGFDPIKPSDTRDGS
>Mature_110_residues
PIERNPCVYIVASQPRGTLYIGVTSDLMQRLAQHRSGETGGFTSRYGVFRLVRFEMFGDMEAAILREKQLKRWRRQWKIN
LIEGDNPQWLDLGVNLGFDPIKPSDTRDGS

Specific function: Unknown

COG id: COG2827

COG function: function code L; Predicted endonuclease containing a URI domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12801; Mature: 12670

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIERNPCVYIVASQPRGTLYIGVTSDLMQRLAQHRSGETGGFTSRYGVFRLVRFEMFGD
CCCCCCCEEEEEECCCCCEEEEEEHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCC
MEAAILREKQLKRWRRQWKINLIEGDNPQWLDLGVNLGFDPIKPSDTRDGS
HHHHHHHHHHHHHHHHHEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PIERNPCVYIVASQPRGTLYIGVTSDLMQRLAQHRSGETGGFTSRYGVFRLVRFEMFGD
CCCCCCEEEEEECCCCCEEEEEEHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCC
MEAAILREKQLKRWRRQWKINLIEGDNPQWLDLGVNLGFDPIKPSDTRDGS
HHHHHHHHHHHHHHHHHEEEEEEECCCCCEEEEECCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA