| Definition | Erythrobacter litoralis HTCC2594 chromosome, complete genome. |
|---|---|
| Accession | NC_007722 |
| Length | 3,052,398 |
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The map label for this gene is glcB [H]
Identifier: 85374609
GI number: 85374609
Start: 1814131
End: 1816245
Strand: Reverse
Name: glcB [H]
Synonym: ELI_08910
Alternate gene names: 85374609
Gene position: 1816245-1814131 (Counterclockwise)
Preceding gene: 85374614
Following gene: 85374608
Centisome position: 59.5
GC content: 63.45
Gene sequence:
>2115_bases ATGACCGACTACACGACCAAAGCCCGCCTGCAGATCGATCCTGCGCTCGCCGCGTTCCTGGAAGGCGAGGTGCTGGCACC CCTGGGCAGGGACGCAGACGCATTCTGGCAGGGCTTCTCCAACCTGGTCCACGGCTTCACTCCGCGCAATCGCGACCTGC TTGCCAAGCGTGAAGAGCTGCAGGCCAAAATCGACGCCTGGCATCGCAAGCGCCGCGGACAAAGCCACGATCATGCAGCC TACAAAGCGTTCCTGAGCGAGATCGGCTACCTCGTCCCGGAGCCGGATGCGTTCACTATCGGCACGCAGAACGTCGATCC CGAAATCGCGACCATGGCCGGGCCGCAGCTGGTGGTGCCGATCCTCAATGCGCGGTTCCTGCTGAATGCCGCCAACGCCC GCTGGGGCAGCCTCTATGACGCGCTCTACGGAACCGATGCGCTCGACGCGCCGCCTGCAAAACCCGGTGGCTATGACGAG GAACGCGGCGCGGCGGTGATCGCCGAGGCCCGCAGGTTCCTTGATGAGGCGGTGCCGCTGAAGTCCGGCAGTTGGGCCGA CCTTACGCTGGAGCGTATCGAGGCCGATGGCATTGCGATTGCCGACGAGAGCCAGTATGTCGGCGAGACCGAGAAGGGCC GTTTGTTCAAAAACAACGGCCTGCACATCGAAGTTCAATGGGCCCCCGAGAGTTCGGTCGGGAAGTCCGACCAGGCCGGC ATCAGCGATGTCGTGATCGAAAGTGCGCTGACGACGATCGCCGATTGCGAGGATTCGGTGGCGGCGGTCGATGCCGAAGA CAAGCTGCTCGCCTACACCAACTGGCTCGGCATCATTCGCGGCGATCTGCAGGAGAGCTTCGAGAAACGCGGGCGCACGA TGACCCGCGCGCTGAATGGCGACAAGAGCTACACCGATACCCATGGCGAGGCGCAGACGCTGCCAGGCCGGAGCCTGATG TTTGTCCGCAATGTCGGGCACTTGATGACCAATCCTGCGATCCTGCTGGAGGATGGCAGCGAGATCCCCGAAGGCATCAT GGACGCCGTCGTCACAAGCGCGATCAGCGCGCATGATGTGCAGGGACTTGGCCGATACGGCAATTCGCGCACCGGCAGCA TCTATATCGTCAAGCCGAAGATGCACGGCCCGGAAGAATGTGCGTTTACCAATGACTTGTTCGACGCGGTTGAGGATTTG CTCGAACTGCCGCGCCACACGATTAAGGTTGGGGTGATGGACGAGGAGCGCCGCACTTCGGCGAATCTCGCTGCGTGCAT TCTCGCGGTGCGCGACCGGATCGTCTTCATCAACACCGGTTTCCTCGACCGGACGGGCGACGAAATCCATACCTCGATGC AGGCCGGGCCGATGATGCGCAAGGGCGAGATGAAAGGCAGCGCCTGGCTCGATGCCTACGAGAAGCGCAATGTCGGCATC GGCATGGCTTGCGGCCTGTCGGGGCGCGCGCAGATCGGCAAGGGCATGTGGCCCGCGCCGGATCTGATGGGCAAGATGAT GCTGGAGAAGATCGGCCATTTGCGCGCGGGGGCCAATACGGCCTGGGTACCGTCGCCGACCGCGGCGACGCTCCACGCGC TGCATTATCACCGCGAGGACGTGTTTGCGATCCAGCGGGACCTCGGCGAAGCGCCCGGCCTCGATCGGCTGCTCACCATC CCGCTCGCCGAGGCGACGAACTGGCCGGAAGACGAAGTGCGCGAGGAACTCGATAACAATGCGCAAGGCCTGCTCGGCTA TGTCGTGCGCTGGATCGATGCGGGCGTCGGCTGTTCCAAGGTGCCGGACATCAGCGATGTCGGCCTGATGGAAGACCGTG CCACCTTGCGCATCTCCAGCCAGCACATGGCCAACTGGCTCCTCCACGGCGTGGCGAGCGAGAACCAAGTGATGGACAGC CTCAAGCGCATGGCCGCCAAGGTCGACGAGCAGAATGCAGGCGACCTGTCCTACGAGCCGATGGCAGGCAATTGGGAAAC GAGCCTCGCGTTCAAGGCCGCCTGCGATCTCGTGTTCAAAGGCGTGGAGCAGCCGAGCGGCTATACCGAGCCGCTGCTGC ATCAATGGCGGCTGCGCAAGAAAGCGGGAGCCTGA
Upstream 100 bases:
>100_bases TCGTCCCCTAAGCCATAGGCGCTTGCGTCCTCCCCAGACAGATAGCGCCAATGTTTCCCGCCAGTTCGCCCGAGCTGCGC GGCCCCCTGAGTGAGGACCC
Downstream 100 bases:
>100_bases CGCGCGCTATTCCGTTCAATACGTGTGAGTTCGCTGTACCAGAGAATGGCCTGGTTCATCCTGCTGGCGGGGCTGGCGAT CGTGCTGATCTCGCGCGGGC
Product: malate synthase G
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 704; Mature: 703
Protein sequence:
>704_residues MTDYTTKARLQIDPALAAFLEGEVLAPLGRDADAFWQGFSNLVHGFTPRNRDLLAKREELQAKIDAWHRKRRGQSHDHAA YKAFLSEIGYLVPEPDAFTIGTQNVDPEIATMAGPQLVVPILNARFLLNAANARWGSLYDALYGTDALDAPPAKPGGYDE ERGAAVIAEARRFLDEAVPLKSGSWADLTLERIEADGIAIADESQYVGETEKGRLFKNNGLHIEVQWAPESSVGKSDQAG ISDVVIESALTTIADCEDSVAAVDAEDKLLAYTNWLGIIRGDLQESFEKRGRTMTRALNGDKSYTDTHGEAQTLPGRSLM FVRNVGHLMTNPAILLEDGSEIPEGIMDAVVTSAISAHDVQGLGRYGNSRTGSIYIVKPKMHGPEECAFTNDLFDAVEDL LELPRHTIKVGVMDEERRTSANLAACILAVRDRIVFINTGFLDRTGDEIHTSMQAGPMMRKGEMKGSAWLDAYEKRNVGI GMACGLSGRAQIGKGMWPAPDLMGKMMLEKIGHLRAGANTAWVPSPTAATLHALHYHREDVFAIQRDLGEAPGLDRLLTI PLAEATNWPEDEVREELDNNAQGLLGYVVRWIDAGVGCSKVPDISDVGLMEDRATLRISSQHMANWLLHGVASENQVMDS LKRMAAKVDEQNAGDLSYEPMAGNWETSLAFKAACDLVFKGVEQPSGYTEPLLHQWRLRKKAGA
Sequences:
>Translated_704_residues MTDYTTKARLQIDPALAAFLEGEVLAPLGRDADAFWQGFSNLVHGFTPRNRDLLAKREELQAKIDAWHRKRRGQSHDHAA YKAFLSEIGYLVPEPDAFTIGTQNVDPEIATMAGPQLVVPILNARFLLNAANARWGSLYDALYGTDALDAPPAKPGGYDE ERGAAVIAEARRFLDEAVPLKSGSWADLTLERIEADGIAIADESQYVGETEKGRLFKNNGLHIEVQWAPESSVGKSDQAG ISDVVIESALTTIADCEDSVAAVDAEDKLLAYTNWLGIIRGDLQESFEKRGRTMTRALNGDKSYTDTHGEAQTLPGRSLM FVRNVGHLMTNPAILLEDGSEIPEGIMDAVVTSAISAHDVQGLGRYGNSRTGSIYIVKPKMHGPEECAFTNDLFDAVEDL LELPRHTIKVGVMDEERRTSANLAACILAVRDRIVFINTGFLDRTGDEIHTSMQAGPMMRKGEMKGSAWLDAYEKRNVGI GMACGLSGRAQIGKGMWPAPDLMGKMMLEKIGHLRAGANTAWVPSPTAATLHALHYHREDVFAIQRDLGEAPGLDRLLTI PLAEATNWPEDEVREELDNNAQGLLGYVVRWIDAGVGCSKVPDISDVGLMEDRATLRISSQHMANWLLHGVASENQVMDS LKRMAAKVDEQNAGDLSYEPMAGNWETSLAFKAACDLVFKGVEQPSGYTEPLLHQWRLRKKAGA >Mature_703_residues TDYTTKARLQIDPALAAFLEGEVLAPLGRDADAFWQGFSNLVHGFTPRNRDLLAKREELQAKIDAWHRKRRGQSHDHAAY KAFLSEIGYLVPEPDAFTIGTQNVDPEIATMAGPQLVVPILNARFLLNAANARWGSLYDALYGTDALDAPPAKPGGYDEE RGAAVIAEARRFLDEAVPLKSGSWADLTLERIEADGIAIADESQYVGETEKGRLFKNNGLHIEVQWAPESSVGKSDQAGI SDVVIESALTTIADCEDSVAAVDAEDKLLAYTNWLGIIRGDLQESFEKRGRTMTRALNGDKSYTDTHGEAQTLPGRSLMF VRNVGHLMTNPAILLEDGSEIPEGIMDAVVTSAISAHDVQGLGRYGNSRTGSIYIVKPKMHGPEECAFTNDLFDAVEDLL ELPRHTIKVGVMDEERRTSANLAACILAVRDRIVFINTGFLDRTGDEIHTSMQAGPMMRKGEMKGSAWLDAYEKRNVGIG MACGLSGRAQIGKGMWPAPDLMGKMMLEKIGHLRAGANTAWVPSPTAATLHALHYHREDVFAIQRDLGEAPGLDRLLTIP LAEATNWPEDEVREELDNNAQGLLGYVVRWIDAGVGCSKVPDISDVGLMEDRATLRISSQHMANWLLHGVASENQVMDSL KRMAAKVDEQNAGDLSYEPMAGNWETSLAFKAACDLVFKGVEQPSGYTEPLLHQWRLRKKAGA
Specific function: Accounts For Almost The Entire Malate-Synthesizing Activity In Cells Metabolizing Glyoxylate. [C]
COG id: COG2225
COG function: function code C; Malate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the malate synthase family. GlcB subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789348, Length=723, Percent_Identity=56.2932226832642, Blast_Score=835, Evalue=0.0, Organism=Escherichia coli, GI1790444, Length=495, Percent_Identity=22.8282828282828, Blast_Score=73, Evalue=6e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011076 - InterPro: IPR001465 - InterPro: IPR006253 [H]
Pfam domain/function: PF01274 Malate_synthase [H]
EC number: =2.3.3.9 [H]
Molecular weight: Translated: 77058; Mature: 76927
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: PS00589 PTS_HPR_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDYTTKARLQIDPALAAFLEGEVLAPLGRDADAFWQGFSNLVHGFTPRNRDLLAKREEL CCCCCCEEEEEECHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH QAKIDAWHRKRRGQSHDHAAYKAFLSEIGYLVPEPDAFTIGTQNVDPEIATMAGPQLVVP HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHCCCEEEHH ILNARFLLNAANARWGSLYDALYGTDALDAPPAKPGGYDEERGAAVIAEARRFLDEAVPL HHCCHHEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC KSGSWADLTLERIEADGIAIADESQYVGETEKGRLFKNNGLHIEVQWAPESSVGKSDQAG CCCCCHHHHHHHCCCCCEEEECCCHHCCCCCCCCEEECCCCEEEEEECCCCCCCCCCCCC ISDVVIESALTTIADCEDSVAAVDAEDKLLAYTNWLGIIRGDLQESFEKRGRTMTRALNG HHHHHHHHHHHHHHCCCCCCEEECCCCCEEEHHHHHHHHHHHHHHHHHHHCHHHHHHHCC DKSYTDTHGEAQTLPGRSLMFVRNVGHLMTNPAILLEDGSEIPEGIMDAVVTSAISAHDV CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH QGLGRYGNSRTGSIYIVKPKMHGPEECAFTNDLFDAVEDLLELPRHTIKVGVMDEERRTS HHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHEEEEECCCHHHHHH ANLAACILAVRDRIVFINTGFLDRTGDEIHTSMQAGPMMRKGEMKGSAWLDAYEKRNVGI HHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCE GMACGLSGRAQIGKGMWPAPDLMGKMMLEKIGHLRAGANTAWVPSPTAATLHALHYHRED EEEECCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH VFAIQRDLGEAPGLDRLLTIPLAEATNWPEDEVREELDNNAQGLLGYVVRWIDAGVGCSK HHHHHHHHCCCCCCCCEEEEEHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCC VPDISDVGLMEDRATLRISSQHMANWLLHGVASENQVMDSLKRMAAKVDEQNAGDLSYEP CCCCCCCCCCCCCCEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC MAGNWETSLAFKAACDLVFKGVEQPSGYTEPLLHQWRLRKKAGA CCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure TDYTTKARLQIDPALAAFLEGEVLAPLGRDADAFWQGFSNLVHGFTPRNRDLLAKREEL CCCCCEEEEEECHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH QAKIDAWHRKRRGQSHDHAAYKAFLSEIGYLVPEPDAFTIGTQNVDPEIATMAGPQLVVP HHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHCCCEEEHH ILNARFLLNAANARWGSLYDALYGTDALDAPPAKPGGYDEERGAAVIAEARRFLDEAVPL HHCCHHEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCC KSGSWADLTLERIEADGIAIADESQYVGETEKGRLFKNNGLHIEVQWAPESSVGKSDQAG CCCCCHHHHHHHCCCCCEEEECCCHHCCCCCCCCEEECCCCEEEEEECCCCCCCCCCCCC ISDVVIESALTTIADCEDSVAAVDAEDKLLAYTNWLGIIRGDLQESFEKRGRTMTRALNG HHHHHHHHHHHHHHCCCCCCEEECCCCCEEEHHHHHHHHHHHHHHHHHHHCHHHHHHHCC DKSYTDTHGEAQTLPGRSLMFVRNVGHLMTNPAILLEDGSEIPEGIMDAVVTSAISAHDV CCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHH QGLGRYGNSRTGSIYIVKPKMHGPEECAFTNDLFDAVEDLLELPRHTIKVGVMDEERRTS HHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHEEEEECCCHHHHHH ANLAACILAVRDRIVFINTGFLDRTGDEIHTSMQAGPMMRKGEMKGSAWLDAYEKRNVGI HHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCE GMACGLSGRAQIGKGMWPAPDLMGKMMLEKIGHLRAGANTAWVPSPTAATLHALHYHRED EEEECCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH VFAIQRDLGEAPGLDRLLTIPLAEATNWPEDEVREELDNNAQGLLGYVVRWIDAGVGCSK HHHHHHHHCCCCCCCCEEEEEHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCC VPDISDVGLMEDRATLRISSQHMANWLLHGVASENQVMDSLKRMAAKVDEQNAGDLSYEP CCCCCCCCCCCCCCEEEECHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC MAGNWETSLAFKAACDLVFKGVEQPSGYTEPLLHQWRLRKKAGA CCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA