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The map label for this gene is allB [C]

Identifier: 85374289

GI number: 85374289

Start: 1518716

End: 1520470

Strand: Direct

Name: allB [C]

Synonym: ELI_07310

Alternate gene names: 85374289

Gene position: 1518716-1520470 (Clockwise)

Preceding gene: 85374287

Following gene: 85374290

Centisome position: 49.75

GC content: 63.76

Gene sequence:

>1755_bases
ATGGCAAATTTCGACCTTGTGATCCGGGGCGGCACCATCGTGGACGGGACCGGCGAGACCCGCTTCACCGGGGACGTCGC
GATCAAGGACGGACTGATCGCGCAGGTCGGCGAAGTGACCGGCAGCGGCGCGGAGGAAATCGACGCCAGCGGCAAGGTCG
TCACGCCCGGCTTCGTCGACATCCATACGCATTACGACGGCCAGGCGACATGGGACCAGGAAATGGCCCCATCGAGCTGG
CATGGCGTCACCACCGTCGTCATGGGCAATTGCGGCGTCGGCTTCGCGCCGGCCAAGCCCGACAAGCACGAGTGGCTGAT
CCAGCTGATGGAAGGCGTCGAAGACATCCCCGGCACCGCGCTCGCCGAAGGGATCACCTGGAACTGGGAGACCTTCCCCG
AATATCTCGACGAGCTCGACAAGATGCCGCGTGCGGTCGATGTCGGCACCCATGTGCCGCACGGCGCGGTCCGCGCCTAT
GTGCTCGGCGATCGCGAGGAGCCCGGCGTTGTTCCGACCGAAGACGAGATCGCGCAGATGGCGCAGATCGTCGAGGATGG
CGTGCGGGCAGGTGCGCTCGGTTTCTCGACCAGCCGGACGGTGCTGCACAAGGATGTGAACGGCGTATTGGTGCCCGGCA
CCACCGCACAAGCCGACGAGCTGGTCGAGCTCGGCCGCGCCATGGGCCGCGCCGGGCACGGCGTGTTCGAAATGGCCAGC
GACCTGCGCCGCGAGTGGAACGAGTTCGAATGGATGGGCAATTTGAGCCGCGAAACCGGCCTTCCCGTCACTTTCGCAGC
GCTGCAGAGCATCGCCAAGGAATTGCCGCTCGACGAGCAGATTCAGACCATGCGCGCCGAGAACGATAACGGCGCCAATA
TCGTCGCCCAGATCGCTTTGCGCGGCAACGGGATCATCATGGCGTGGCAGGGGACGGTGAACCCCTTCATGCTGCGCCCG
AGCTGGCAGGACATCGCCGAGCTTTCGTGGGAGGAGCAGAAGGCAAAGCTGCTCGATCCCGCCTTCAAGGCCAAGCTTCT
GAGCGAAGAGAACGACTATTCCGAAGTGGCCGAGGACACCAAGGACGTCATCATGTTCGTCACCAATGCGTGGGGCATGA
TGTTCGAGATGGACGACAGTTTCGATTACGAGCCGACGCATGAGGAATCGGTCCTCGCGCGCGGCCAGAAGGCGGGCGTC
GAGCCGCAGGAATATGCTTACGACATGCTCTGCCGCGACGATGCGAGCGGGTTCATCTATTTCCCGATCCTCAATTATGC
CGACGGCGACCTGGAATTCCTGCACCCGCTCCAGCACAGCGACGACACGGTCAATTCGCTGAGCGATGGCGGAGCGCATT
GCGGCACGATCTGCGATGCGGCGAGCCCAACCTTCATGCTCCAGCACTGGGTCCGCGATCGCAAGCGCGGCGATACGATC
AGCCTGGAAAACGCGATCAAGCGGCAATGCTCCGACACCGCCAGGCTCTACGGTTTGGAAGACCGCGGCATCCTTGCGCC
GGGCTATCTTGCCGATCTCAACATCATCGACATGGATCAGATCAAGCTCGGAAAGCCGTGGCTGGCGTTCGACCTGCCTG
CGGGTGGCAGGCGCCTGTTGCAGAGGGCCGACGGCTATGTCTGCACGATCAAGAATGGCACCGTGACCTTCCGCGACGGC
GAATGGACCGGCGCAACGCCGGGTGGCCTGATCCGCGGGCCGCAGCGTGCCGAGATGCTCGAAGCCGCCGAATGA

Upstream 100 bases:

>100_bases
GGATCGGGCATCCAGCTTGTCTCTCTCTCCATGCAAGAGGTCTTAGCATCGCCGCATTCTGTGTGCTATATAAGTTGCAA
ACAGAAATGGGAGAGAGACC

Downstream 100 bases:

>100_bases
GCGGTTACGCGCCCCGCAAGGGGGATTGGGCCGTCATCACCGGAGCCGGACGCGGAACCGGACGTTTCCTGGCGCAGCAT
TTCGCGGCCAAGGGCATGCG

Product: hypothetical protein

Products: Allantoate; H+ [C]

Alternate protein names: NA

Number of amino acids: Translated: 584; Mature: 583

Protein sequence:

>584_residues
MANFDLVIRGGTIVDGTGETRFTGDVAIKDGLIAQVGEVTGSGAEEIDASGKVVTPGFVDIHTHYDGQATWDQEMAPSSW
HGVTTVVMGNCGVGFAPAKPDKHEWLIQLMEGVEDIPGTALAEGITWNWETFPEYLDELDKMPRAVDVGTHVPHGAVRAY
VLGDREEPGVVPTEDEIAQMAQIVEDGVRAGALGFSTSRTVLHKDVNGVLVPGTTAQADELVELGRAMGRAGHGVFEMAS
DLRREWNEFEWMGNLSRETGLPVTFAALQSIAKELPLDEQIQTMRAENDNGANIVAQIALRGNGIIMAWQGTVNPFMLRP
SWQDIAELSWEEQKAKLLDPAFKAKLLSEENDYSEVAEDTKDVIMFVTNAWGMMFEMDDSFDYEPTHEESVLARGQKAGV
EPQEYAYDMLCRDDASGFIYFPILNYADGDLEFLHPLQHSDDTVNSLSDGGAHCGTICDAASPTFMLQHWVRDRKRGDTI
SLENAIKRQCSDTARLYGLEDRGILAPGYLADLNIIDMDQIKLGKPWLAFDLPAGGRRLLQRADGYVCTIKNGTVTFRDG
EWTGATPGGLIRGPQRAEMLEAAE

Sequences:

>Translated_584_residues
MANFDLVIRGGTIVDGTGETRFTGDVAIKDGLIAQVGEVTGSGAEEIDASGKVVTPGFVDIHTHYDGQATWDQEMAPSSW
HGVTTVVMGNCGVGFAPAKPDKHEWLIQLMEGVEDIPGTALAEGITWNWETFPEYLDELDKMPRAVDVGTHVPHGAVRAY
VLGDREEPGVVPTEDEIAQMAQIVEDGVRAGALGFSTSRTVLHKDVNGVLVPGTTAQADELVELGRAMGRAGHGVFEMAS
DLRREWNEFEWMGNLSRETGLPVTFAALQSIAKELPLDEQIQTMRAENDNGANIVAQIALRGNGIIMAWQGTVNPFMLRP
SWQDIAELSWEEQKAKLLDPAFKAKLLSEENDYSEVAEDTKDVIMFVTNAWGMMFEMDDSFDYEPTHEESVLARGQKAGV
EPQEYAYDMLCRDDASGFIYFPILNYADGDLEFLHPLQHSDDTVNSLSDGGAHCGTICDAASPTFMLQHWVRDRKRGDTI
SLENAIKRQCSDTARLYGLEDRGILAPGYLADLNIIDMDQIKLGKPWLAFDLPAGGRRLLQRADGYVCTIKNGTVTFRDG
EWTGATPGGLIRGPQRAEMLEAAE
>Mature_583_residues
ANFDLVIRGGTIVDGTGETRFTGDVAIKDGLIAQVGEVTGSGAEEIDASGKVVTPGFVDIHTHYDGQATWDQEMAPSSWH
GVTTVVMGNCGVGFAPAKPDKHEWLIQLMEGVEDIPGTALAEGITWNWETFPEYLDELDKMPRAVDVGTHVPHGAVRAYV
LGDREEPGVVPTEDEIAQMAQIVEDGVRAGALGFSTSRTVLHKDVNGVLVPGTTAQADELVELGRAMGRAGHGVFEMASD
LRREWNEFEWMGNLSRETGLPVTFAALQSIAKELPLDEQIQTMRAENDNGANIVAQIALRGNGIIMAWQGTVNPFMLRPS
WQDIAELSWEEQKAKLLDPAFKAKLLSEENDYSEVAEDTKDVIMFVTNAWGMMFEMDDSFDYEPTHEESVLARGQKAGVE
PQEYAYDMLCRDDASGFIYFPILNYADGDLEFLHPLQHSDDTVNSLSDGGAHCGTICDAASPTFMLQHWVRDRKRGDTIS
LENAIKRQCSDTARLYGLEDRGILAPGYLADLNIIDMDQIKLGKPWLAFDLPAGGRRLLQRADGYVCTIKNGTVTFRDGE
WTGATPGGLIRGPQRAEMLEAAE

Specific function: Involved In The Anaerobic Utilization Of Allantoin. [C]

COG id: COG3653

COG function: function code Q; N-acyl-D-aspartate/D-glutamate deacylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-acyl-D-amino-acid deacylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: 3.5.2.5 [C]

Molecular weight: Translated: 64017; Mature: 63886

Theoretical pI: Translated: 4.24; Mature: 4.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANFDLVIRGGTIVDGTGETRFTGDVAIKDGLIAQVGEVTGSGAEEIDASGKVVTPGFVD
CCCCEEEEECCEEEECCCCCEEECCEEECCCHHHHHHHHCCCCHHHHCCCCCEECCCEEE
IHTHYDGQATWDQEMAPSSWHGVTTVVMGNCGVGFAPAKPDKHEWLIQLMEGVEDIPGTA
EEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCHH
LAEGITWNWETFPEYLDELDKMPRAVDVGTHVPHGAVRAYVLGDREEPGVVPTEDEIAQM
HHCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHH
AQIVEDGVRAGALGFSTSRTVLHKDVNGVLVPGTTAQADELVELGRAMGRAGHGVFEMAS
HHHHHHHHHCCCCCCCCCCHHEEECCCCEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHH
DLRREWNEFEWMGNLSRETGLPVTFAALQSIAKELPLDEQIQTMRAENDNGANIVAQIAL
HHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCEEEEEEEE
RGNGIIMAWQGTVNPFMLRPSWQDIAELSWEEQKAKLLDPAFKAKLLSEENDYSEVAEDT
CCCCEEEEEECCCCCEEECCCHHHHHHCCHHHHHHHHCCHHHHHHHHCCCCCHHHHHHCH
KDVIMFVTNAWGMMFEMDDSFDYEPTHEESVLARGQKAGVEPQEYAYDMLCRDDASGFIY
HHEEEEEECCCCEEEEECCCCCCCCCCHHHHHHCCHHCCCCHHHHHHHHHCCCCCCCEEE
FPILNYADGDLEFLHPLQHSDDTVNSLSDGGAHCGTICDAASPTFMLQHWVRDRKRGDTI
EEEECCCCCCHHHHCCCCCCCCHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHHHHCCCEE
SLENAIKRQCSDTARLYGLEDRGILAPGYLADLNIIDMDQIKLGKPWLAFDLPAGGRRLL
CHHHHHHHHHCCHHHEEECCCCCEECCCCEECCCEEECCCEECCCCEEEEECCCCHHHHH
QRADGYVCTIKNGTVTFRDGEWTGATPGGLIRGPQRAEMLEAAE
HHCCCEEEEEECCEEEEECCCCCCCCCCCCCCCCHHHHHHHCCC
>Mature Secondary Structure 
ANFDLVIRGGTIVDGTGETRFTGDVAIKDGLIAQVGEVTGSGAEEIDASGKVVTPGFVD
CCCEEEEECCEEEECCCCCEEECCEEECCCHHHHHHHHCCCCHHHHCCCCCEECCCEEE
IHTHYDGQATWDQEMAPSSWHGVTTVVMGNCGVGFAPAKPDKHEWLIQLMEGVEDIPGTA
EEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCHH
LAEGITWNWETFPEYLDELDKMPRAVDVGTHVPHGAVRAYVLGDREEPGVVPTEDEIAQM
HHCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHH
AQIVEDGVRAGALGFSTSRTVLHKDVNGVLVPGTTAQADELVELGRAMGRAGHGVFEMAS
HHHHHHHHHCCCCCCCCCCHHEEECCCCEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHH
DLRREWNEFEWMGNLSRETGLPVTFAALQSIAKELPLDEQIQTMRAENDNGANIVAQIAL
HHHHHHHHHHHHCCCCHHCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCCCCCEEEEEEEE
RGNGIIMAWQGTVNPFMLRPSWQDIAELSWEEQKAKLLDPAFKAKLLSEENDYSEVAEDT
CCCCEEEEEECCCCCEEECCCHHHHHHCCHHHHHHHHCCHHHHHHHHCCCCCHHHHHHCH
KDVIMFVTNAWGMMFEMDDSFDYEPTHEESVLARGQKAGVEPQEYAYDMLCRDDASGFIY
HHEEEEEECCCCEEEEECCCCCCCCCCHHHHHHCCHHCCCCHHHHHHHHHCCCCCCCEEE
FPILNYADGDLEFLHPLQHSDDTVNSLSDGGAHCGTICDAASPTFMLQHWVRDRKRGDTI
EEEECCCCCCHHHHCCCCCCCCHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHHHHCCCEE
SLENAIKRQCSDTARLYGLEDRGILAPGYLADLNIIDMDQIKLGKPWLAFDLPAGGRRLL
CHHHHHHHHHCCHHHEEECCCCCEECCCCEECCCEEECCCEECCCCEEEEECCCCHHHHH
QRADGYVCTIKNGTVTFRDGEWTGATPGGLIRGPQRAEMLEAAE
HHCCCEEEEEECCEEEEECCCCCCCCCCCCCCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Allantoin; H2O [C]

Specific reaction: Allantoin + H2O --> Allantoate + H+ [C]

General reaction: Carboxylic acid amide hydrolysis [C]

Inhibitor: Dithiothreitol; p-Chloromercuribenzene-sulphonic acid [C]

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]