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The map label for this gene is rlpA [H]

Identifier: 85374068

GI number: 85374068

Start: 1290436

End: 1291641

Strand: Direct

Name: rlpA [H]

Synonym: ELI_06205

Alternate gene names: 85374068

Gene position: 1290436-1291641 (Clockwise)

Preceding gene: 85374067

Following gene: 85374069

Centisome position: 42.28

GC content: 65.26

Gene sequence:

>1206_bases
ATGAGATTGCTCAATGATGTTCGCAAGCTTGGCCTTTTTTTCGGTCTAGGCGTTCTGCTGTCCGCTTGCGGTGGCGGTGC
TTCGCTTCCGGAGTTGGCCAGCACGGAAACTTCTGCTCGCGCGGCTTTCGGCCCCGAAGCGGACTATCCGCAGGTTCTGG
GCGAGCCGTTTACCGTGGACGGCGAGCTTTTCACGCCCGAAGACGTTTTCAGCTACGATTCGGTAGGTTTCGCAACGCTC
GACAGCGAAGGCGGGCAGGGCGTAAGCGTTGCGCACAAGACGCAGCCGTACCCGAGCTATGTCGAAGTCACTTCGTTGGA
AACCGGCAAGACCATTCTCGCGCGAGTAGAGCGGCGCGGCCCGATGACGGCATCGCGCATCGTCGCCCTGTCCCCGGGCG
CTCAAGCACAACTCGGCGCAGGGGAGGGAACACCGGTGCGCGTCCGCCGAGTCAATCCGCCTGAATACGAACGCGCGGAA
TTGCGGGCAGGGAAGCCTGTTCCGCCGCGCCTCTCGACCCCCGACAGCCTGCTTGCCGTGCTGAAGGAAAAGCTGCCGAT
CAAGGGATCGGCTAGCCTCGCAGGTCCCGCGATCCCCGCTGCGGCGCAGGCAGCCGCGATCCAGCAGGCCAGCGTCGCGC
CTTCCAGCGCTTCTCGTGCGGCAGAGCTTGCGCCTGTTGCGGCCGCCGCCCCGGCTTCGGTCGAGAAAGATTTCGACAAG
GCTTTCACCGAGAAGCCCGTCACGACCGTTGCGGCACGCAGTCACAACGGCAAATATCCGCTACCGCCGATGGCCGCAGG
CGCGGGCCCTGCCGTTCGGGCACCGACCGTCGCTGCGTCGCCCATGTCGCGTTCCGCTGCACCGGTGGTGGTCGCGTCAA
CTCCCGAAACGCGAAGCTTCTCGCTGCCCGGACAGCAATCCGCTACCCCGAATACCGAACCGGTATCACGCTCGCCCGTA
CGCCGTGCGGCGCCAGTCGCCATTGCGGCAACTGCCGATGGCAAGTTCATCGTCCAGGCCGCTGCGTTCTCCAGCAAGAC
CAATGCCGATCGCGCCGCCGACAAGCTCGACGGGTTTGTCATGCCTGCCGGTCGCTTCTTCCGCGTCCGCACCGGCCCTT
ACGCTACCCGTGGACAGGCCGAGGCAGCGCTCGCCAAGGTACGGGCGGCGGGCTATAGCGACGCTCGCGTCTTTTCAGCA
GGATAG

Upstream 100 bases:

>100_bases
GGTCCGGGCACACCGGCTTGGCTCTTAACCTCAAATTATCGAGTTATCCTCGAATATAACTGCTCCAATTACTACGCGAT
GAGTGTGGGGCTGTTAGCCG

Downstream 100 bases:

>100_bases
ACCGCCGGATCCCGCCGGCGGGCGGGAGTTCGGGTGAGGATCGATTTCAGGAGTGCATTGGCTGTGTGCGGGCTTGCAAT
TGCGAGCCCTGCCCATGGCG

Product: putative rare lipoprotein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 401; Mature: 401

Protein sequence:

>401_residues
MRLLNDVRKLGLFFGLGVLLSACGGGASLPELASTETSARAAFGPEADYPQVLGEPFTVDGELFTPEDVFSYDSVGFATL
DSEGGQGVSVAHKTQPYPSYVEVTSLETGKTILARVERRGPMTASRIVALSPGAQAQLGAGEGTPVRVRRVNPPEYERAE
LRAGKPVPPRLSTPDSLLAVLKEKLPIKGSASLAGPAIPAAAQAAAIQQASVAPSSASRAAELAPVAAAAPASVEKDFDK
AFTEKPVTTVAARSHNGKYPLPPMAAGAGPAVRAPTVAASPMSRSAAPVVVASTPETRSFSLPGQQSATPNTEPVSRSPV
RRAAPVAIAATADGKFIVQAAAFSSKTNADRAADKLDGFVMPAGRFFRVRTGPYATRGQAEAALAKVRAAGYSDARVFSA
G

Sequences:

>Translated_401_residues
MRLLNDVRKLGLFFGLGVLLSACGGGASLPELASTETSARAAFGPEADYPQVLGEPFTVDGELFTPEDVFSYDSVGFATL
DSEGGQGVSVAHKTQPYPSYVEVTSLETGKTILARVERRGPMTASRIVALSPGAQAQLGAGEGTPVRVRRVNPPEYERAE
LRAGKPVPPRLSTPDSLLAVLKEKLPIKGSASLAGPAIPAAAQAAAIQQASVAPSSASRAAELAPVAAAAPASVEKDFDK
AFTEKPVTTVAARSHNGKYPLPPMAAGAGPAVRAPTVAASPMSRSAAPVVVASTPETRSFSLPGQQSATPNTEPVSRSPV
RRAAPVAIAATADGKFIVQAAAFSSKTNADRAADKLDGFVMPAGRFFRVRTGPYATRGQAEAALAKVRAAGYSDARVFSA
G
>Mature_401_residues
MRLLNDVRKLGLFFGLGVLLSACGGGASLPELASTETSARAAFGPEADYPQVLGEPFTVDGELFTPEDVFSYDSVGFATL
DSEGGQGVSVAHKTQPYPSYVEVTSLETGKTILARVERRGPMTASRIVALSPGAQAQLGAGEGTPVRVRRVNPPEYERAE
LRAGKPVPPRLSTPDSLLAVLKEKLPIKGSASLAGPAIPAAAQAAAIQQASVAPSSASRAAELAPVAAAAPASVEKDFDK
AFTEKPVTTVAARSHNGKYPLPPMAAGAGPAVRAPTVAASPMSRSAAPVVVASTPETRSFSLPGQQSATPNTEPVSRSPV
RRAAPVAIAATADGKFIVQAAAFSSKTNADRAADKLDGFVMPAGRFFRVRTGPYATRGQAEAALAKVRAAGYSDARVFSA
G

Specific function: Unknown

COG id: COG0797

COG function: function code M; Lipoproteins

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rlpA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009009
- InterPro:   IPR012997
- InterPro:   IPR007730 [H]

Pfam domain/function: PF03330 DPBB_1; PF05036 SPOR [H]

EC number: NA

Molecular weight: Translated: 41176; Mature: 41176

Theoretical pI: Translated: 10.04; Mature: 10.04

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLNDVRKLGLFFGLGVLLSACGGGASLPELASTETSARAAFGPEADYPQVLGEPFTVD
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCHHCCCCCCCCHHHCCCCEEEC
GELFTPEDVFSYDSVGFATLDSEGGQGVSVAHKTQPYPSYVEVTSLETGKTILARVERRG
CCEECHHHHHCCCCCCEEEECCCCCCCEEEEECCCCCCCEEEEEECCCCHHHHHHHHHCC
PMTASRIVALSPGAQAQLGAGEGTPVRVRRVNPPEYERAELRAGKPVPPRLSTPDSLLAV
CCCHHEEEEECCCCCEECCCCCCCCEEEEECCCCCHHHHHHCCCCCCCCCCCCHHHHHHH
LKEKLPIKGSASLAGPAIPAAAQAAAIQQASVAPSSASRAAELAPVAAAAPASVEKDFDK
HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCHHHCCCCHHHHHHHH
AFTEKPVTTVAARSHNGKYPLPPMAAGAGPAVRAPTVAASPMSRSAAPVVVASTPETRSF
HHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEE
SLPGQQSATPNTEPVSRSPVRRAAPVAIAATADGKFIVQAAAFSSKTNADRAADKLDGFV
CCCCCCCCCCCCCCCCCCCHHHCCCEEEEEECCCCEEEEEEHHCCCCCHHHHHHHHCCEE
MPAGRFFRVRTGPYATRGQAEAALAKVRAAGYSDARVFSAG
ECCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEECC
>Mature Secondary Structure
MRLLNDVRKLGLFFGLGVLLSACGGGASLPELASTETSARAAFGPEADYPQVLGEPFTVD
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCHHCCCCCCCCHHHCCCCEEEC
GELFTPEDVFSYDSVGFATLDSEGGQGVSVAHKTQPYPSYVEVTSLETGKTILARVERRG
CCEECHHHHHCCCCCCEEEECCCCCCCEEEEECCCCCCCEEEEEECCCCHHHHHHHHHCC
PMTASRIVALSPGAQAQLGAGEGTPVRVRRVNPPEYERAELRAGKPVPPRLSTPDSLLAV
CCCHHEEEEECCCCCEECCCCCCCCEEEEECCCCCHHHHHHCCCCCCCCCCCCHHHHHHH
LKEKLPIKGSASLAGPAIPAAAQAAAIQQASVAPSSASRAAELAPVAAAAPASVEKDFDK
HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCHHHCCCCHHHHHHHH
AFTEKPVTTVAARSHNGKYPLPPMAAGAGPAVRAPTVAASPMSRSAAPVVVASTPETRSF
HHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEE
SLPGQQSATPNTEPVSRSPVRRAAPVAIAATADGKFIVQAAAFSSKTNADRAADKLDGFV
CCCCCCCCCCCCCCCCCCCHHHCCCEEEEEECCCCEEEEEEHHCCCCCHHHHHHHHCCEE
MPAGRFFRVRTGPYATRGQAEAALAKVRAAGYSDARVFSAG
ECCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]