Click here to switch to the map view.

The map label for this gene is ygeA [H]

Identifier: 85373302

GI number: 85373302

Start: 514643

End: 515320

Strand: Direct

Name: ygeA [H]

Synonym: ELI_02375

Alternate gene names: 85373302

Gene position: 514643-515320 (Clockwise)

Preceding gene: 85373301

Following gene: 85373303

Centisome position: 16.86

GC content: 61.65

Gene sequence:

>678_bases
ATGATCGGGGGGATGAGCTGGATCTCGACCCGTACCTATTACGAATACATCAACCAGCTGATGCAGAAACGCTGCGGACC
CAAGGCGAGCGCGCCGCTATTGATCGACAGTCTCGATTATCGCGACTTCACCGCTCTGGACACAGAGGCCGACTGGGATC
GTGCGACCGGCCTGCTGATCGATTCCGCCAGGCGCCTCGAACAGGCCGGGGCCGAGGGTATCGTGATCACCGCCAATGCG
ATGCACCGGGTGTACGACAAGCTTGTCGACGCCGTGTCGATCGAGGTGCTGCACATCGCCGATTCCACCGGCGAGCGCAT
GCAGGCCAAGGGGGCCAGCGATGCCGCGATCCTCGGCACCAAGGCGGTGATGACGGAAAGCTTCTTTCGCAAGCGGCTGG
TTTCGCACGGCGTCGACCTGCTCCCGCCCGAGATGGCCCATGCCGAACAGCTCGAACGGCTAATTTCCCAAGAGCTGAAA
CTCGGCAAGAAGACCCGCGATGCCGAGCGCACGCTCAAGTCGATGATTACCTGGTACGAACAGCATGGCGCCAAGGCGAT
CGTGCTCGCCTGTACCGAGCTGGAGCTGGTCGTCGACATCGATGCGAACGTGCTGCCGATCTACGACACGGCGCGCATCC
ATTGCGAAGCGGCGATCGAGTGGATCGATTGCAGCTGA

Upstream 100 bases:

>100_bases
CTCACGCGCTTGCGAAACTTGGCGCCGCCTCTAGAAACGGCCGGAACACGCTCTCGTTTGGAGCGAGGCCATTGGGGGTG
ATGCGGTGCGCAAGCTGGGA

Downstream 100 bases:

>100_bases
CACCGGGATCCGGATCGACCACTGCACTTTCTCCGTGTTGCCCGATTGTTCCCGTTGTCGCCGTTTGCGGGCGCTTCTAA
GCCTTCCGGCATATGTCGCG

Product: aspartate racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MIGGMSWISTRTYYEYINQLMQKRCGPKASAPLLIDSLDYRDFTALDTEADWDRATGLLIDSARRLEQAGAEGIVITANA
MHRVYDKLVDAVSIEVLHIADSTGERMQAKGASDAAILGTKAVMTESFFRKRLVSHGVDLLPPEMAHAEQLERLISQELK
LGKKTRDAERTLKSMITWYEQHGAKAIVLACTELELVVDIDANVLPIYDTARIHCEAAIEWIDCS

Sequences:

>Translated_225_residues
MIGGMSWISTRTYYEYINQLMQKRCGPKASAPLLIDSLDYRDFTALDTEADWDRATGLLIDSARRLEQAGAEGIVITANA
MHRVYDKLVDAVSIEVLHIADSTGERMQAKGASDAAILGTKAVMTESFFRKRLVSHGVDLLPPEMAHAEQLERLISQELK
LGKKTRDAERTLKSMITWYEQHGAKAIVLACTELELVVDIDANVLPIYDTARIHCEAAIEWIDCS
>Mature_225_residues
MIGGMSWISTRTYYEYINQLMQKRCGPKASAPLLIDSLDYRDFTALDTEADWDRATGLLIDSARRLEQAGAEGIVITANA
MHRVYDKLVDAVSIEVLHIADSTGERMQAKGASDAAILGTKAVMTESFFRKRLVSHGVDLLPPEMAHAEQLERLISQELK
LGKKTRDAERTLKSMITWYEQHGAKAIVLACTELELVVDIDANVLPIYDTARIHCEAAIEWIDCS

Specific function: Unknown

COG id: COG1794

COG function: function code M; Aspartate racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aspartate/glutamate racemases family [H]

Homologues:

Organism=Escherichia coli, GI1789205, Length=223, Percent_Identity=35.4260089686099, Blast_Score=159, Evalue=1e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015942
- InterPro:   IPR001920
- InterPro:   IPR018187
- InterPro:   IPR004380 [H]

Pfam domain/function: PF01177 Asp_Glu_race [H]

EC number: NA

Molecular weight: Translated: 25085; Mature: 25085

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGGMSWISTRTYYEYINQLMQKRCGPKASAPLLIDSLDYRDFTALDTEADWDRATGLLI
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCEECCCCCCHHHHHHHHH
DSARRLEQAGAEGIVITANAMHRVYDKLVDAVSIEVLHIADSTGERMQAKGASDAAILGT
HHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHCCCCCCHHHHHH
KAVMTESFFRKRLVSHGVDLLPPEMAHAEQLERLISQELKLGKKTRDAERTLKSMITWYE
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
QHGAKAIVLACTELELVVDIDANVLPIYDTARIHCEAAIEWIDCS
HCCCEEEEEEEEEEEEEEECCCCEEEEECCHHEEEEEEEEEECCC
>Mature Secondary Structure
MIGGMSWISTRTYYEYINQLMQKRCGPKASAPLLIDSLDYRDFTALDTEADWDRATGLLI
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCEECCCCCCHHHHHHHHH
DSARRLEQAGAEGIVITANAMHRVYDKLVDAVSIEVLHIADSTGERMQAKGASDAAILGT
HHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHCCCCCCHHHHHH
KAVMTESFFRKRLVSHGVDLLPPEMAHAEQLERLISQELKLGKKTRDAERTLKSMITWYE
HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
QHGAKAIVLACTELELVVDIDANVLPIYDTARIHCEAAIEWIDCS
HCCCEEEEEEEEEEEEEEECCCCEEEEECCHHEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6350602; 2836407; 9278503 [H]