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The map label for this gene is yafK [C]

Identifier: 85373228

GI number: 85373228

Start: 447885

End: 448394

Strand: Direct

Name: yafK [C]

Synonym: ELI_02005

Alternate gene names: 85373228

Gene position: 447885-448394 (Clockwise)

Preceding gene: 85373226

Following gene: 85373230

Centisome position: 14.67

GC content: 66.67

Gene sequence:

>510_bases
ATGATCCGCTTCCGCATTCCGGCCTTGATGCTCGGCCTAGCATTCGTCGCATCCTGCGCGCCGACGCCGCAGCCGGTGTC
TGTCGAGGCGCCGCCGGTCGATTTCCTGCTGGTCGACAAGTCGGACCGGACCCTGGCGCTTTATCGCGACGGGGCGGAAG
TGCGACGCTACACGGGCCTGCAATTCGGCGATGCGCCACTGGGCCACAAGCGCTTCGAAGGGGACGAGCGCACGCCGGAA
GGCCGCTATACGATCGATACGCGCAATCCGAACAGCGCCTATTACCTGTCCCTGCGGGTCTCCTATCCCAACGCGCAGGA
CCGCGCCTATGCCGAGGGGCAGGGGCGCGATCCCGGGGGTGACATCTTCCTGCACGGCCAGCCGAACTGGTTGCCGGCGG
GGCGCATGCCGGGGGACTGGACCGATGGTTGCATAGCCTTCACCAACGCCGAGATGGACGAGCTGTGGCGGCTGGTGCGC
GACGGAACACCGATCGAAATCCGCCCCTAG

Upstream 100 bases:

>100_bases
GCTGTCTCTCCTCAGGCATCCCCTGCGCTGCACTATGTGCCGAGGGGGCAAACTTGTCACGGTTCATTGCAGGTTCCGGC
CAATGCCCTAGCATAGTCCC

Downstream 100 bases:

>100_bases
CTTACTTCGCGCCCAGCTCGGCGACCTGAGTCTGCAGGCGTTTCACTTCCTTCAGCAGCATCAGCCCGACCACGATGGCG
ATGGCAAAGGCGGTTTTCTT

Product: hypothetical protein

Products: NA

Alternate protein names: ErfK/YbiS/YcfS/YnhG; Lipoprotein; ErfK/YbiS/YcfS/YnhG-Related Protein; ErfK/YbiS/YcfS/YnhG Protein; Peptidoglycan L D-Transpeptidase Lipoprotein; Protein ERFK

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MIRFRIPALMLGLAFVASCAPTPQPVSVEAPPVDFLLVDKSDRTLALYRDGAEVRRYTGLQFGDAPLGHKRFEGDERTPE
GRYTIDTRNPNSAYYLSLRVSYPNAQDRAYAEGQGRDPGGDIFLHGQPNWLPAGRMPGDWTDGCIAFTNAEMDELWRLVR
DGTPIEIRP

Sequences:

>Translated_169_residues
MIRFRIPALMLGLAFVASCAPTPQPVSVEAPPVDFLLVDKSDRTLALYRDGAEVRRYTGLQFGDAPLGHKRFEGDERTPE
GRYTIDTRNPNSAYYLSLRVSYPNAQDRAYAEGQGRDPGGDIFLHGQPNWLPAGRMPGDWTDGCIAFTNAEMDELWRLVR
DGTPIEIRP
>Mature_169_residues
MIRFRIPALMLGLAFVASCAPTPQPVSVEAPPVDFLLVDKSDRTLALYRDGAEVRRYTGLQFGDAPLGHKRFEGDERTPE
GRYTIDTRNPNSAYYLSLRVSYPNAQDRAYAEGQGRDPGGDIFLHGQPNWLPAGRMPGDWTDGCIAFTNAEMDELWRLVR
DGTPIEIRP

Specific function: Unknown

COG id: COG3034

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18898; Mature: 18898

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRFRIPALMLGLAFVASCAPTPQPVSVEAPPVDFLLVDKSDRTLALYRDGAEVRRYTGL
CEEEEHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEECCCCEEEEEECCCHHHHHCCC
QFGDAPLGHKRFEGDERTPEGRYTIDTRNPNSAYYLSLRVSYPNAQDRAYAEGQGRDPGG
CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEEEECCCCCCCEECCCCCCCCCC
DIFLHGQPNWLPAGRMPGDWTDGCIAFTNAEMDELWRLVRDGTPIEIRP
CEEECCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCEEECC
>Mature Secondary Structure
MIRFRIPALMLGLAFVASCAPTPQPVSVEAPPVDFLLVDKSDRTLALYRDGAEVRRYTGL
CEEEEHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEECCCCEEEEEECCCHHHHHCCC
QFGDAPLGHKRFEGDERTPEGRYTIDTRNPNSAYYLSLRVSYPNAQDRAYAEGQGRDPGG
CCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEEEECCCCCCCEECCCCCCCCCC
DIFLHGQPNWLPAGRMPGDWTDGCIAFTNAEMDELWRLVRDGTPIEIRP
CEEECCCCCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA