| Definition | Erythrobacter litoralis HTCC2594 chromosome, complete genome. |
|---|---|
| Accession | NC_007722 |
| Length | 3,052,398 |
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The map label for this gene is murF [H]
Identifier: 85373182
GI number: 85373182
Start: 397830
End: 399326
Strand: Direct
Name: murF [H]
Synonym: ELI_01775
Alternate gene names: 85373182
Gene position: 397830-399326 (Clockwise)
Preceding gene: 85373181
Following gene: 85373183
Centisome position: 13.03
GC content: 66.8
Gene sequence:
>1497_bases ATGCGCGGCGCAGATTTCGAAAAATGCCTGGGGCGCAACCGAATGAGCATGCACAGTGCCTTGCTGAAATGGCCGGTCAC GCGGCGCGACGCGCTGCCCGTGGCGCTCTGGTCCGCGCAGGAGATTGCTGCGGCGACCGGTGGCACCGCCAGCGGCGACT TCCAGTGCGCCGGTGTCGAAATGGACAGCCGCGACGTGCGCCCGGGCGACCTCTTCGTCGCGCTCAAGGGCGAGAGCATG GACGGCCACCGCTTCGTCGAGAAAGCTTTTGCCGCAGGCGCCGCCGCCGCGCTCGTGGAGCGACCGGTGGATTGGCCGCA TGTGCTGGTCGAAGATACCGGCGCCGCGCTCGAAGCGCTTGCTCACGCTGCGCGCGAACGGGCCGACGCCAAGCGCATCG GCGTGACCGGATCGGTCGGCAAGACCGGCGTCAAGGAAGCGATTTTCGCCGCGCTGGAGAAGTCGAGCCGCGGTCAGGCA CATCGCTCGGTGCGCAGCTATAACAACCATGTCGGCGTCCCCCTAAGTCTCGCCCGGATGCCCGCGCGCAGCCGCTACGG CGTGTTCGAGATGGGCATGAACCATGCGGGCGAGATTGCCGGACTGACCGATCATGTCCGCCCGCACGTGGCAGTCATCA CCACCATCGCGCCCGCGCATATCGAGAATCTCGGCTCGATCGAAGCAATTGCCGATGCGAAGGCGGAAATCTTCGAAGGA CTCGTGAAGGGGGGCACTGCCGTGATCCCCGCCGACAGCGAGCAATACGAACAATTGCGCGCGAGCGCCGAAAAGCGCGG CGTCACCATCGTATCCTTCGGCCGCGCCGACCATGCCGACGTGCGCCTGCTCGATGCCATTCCTGCCGCCAATGGCGGAT CGCTGGTGACCGCGCAGGTGCGCGACAGTCGCCTGTGCTTTACCGTAGCCGAGCCGGGCGAGCACTGGGTGTCCAATGCG CTGGCTGTGCTCGCTGCGGTGCAGGCGGCGGGCGGCGATCTCGGCGCTGCTGGCCTCGCGCTGGCGGAACTGGGTGGGCT GAAAGGGCGCGGCGCACGCCACCATGTCGCAGTGACCGGCGGTAAGGCGTTGCTGATCGACGAAAGCTACAACGCCAACC CCGCTTCGATGCGGGCGACGCTGCGCCAGCTCGGCCAAACCCCGGCGACGCGCCGGATCGCCGTGCTCGGCAGTATGAAG GAACTGGGCGATTTCGGCCCCGAATTCCATCGCCAGCTGGCCGAACCGATGGGCGAGGCCGATCTCGATTATGCCGTGCT GGTCGGCGACGAGATGTTGGCGCTGGCGCGGCACTTGGGGAAAGCGGGCTCCGGCACGCTTGGCAAGACTCCCGCCTTCG CCCATTGCGATGGACCTGCCGAGGCGATCGCGGCGCTGCAGGAATACGGGTTGACCGCAGGCGATGCGATTCTGGTCAAG GGCTCCAATTCGATCGGGCTCGGCAAGCTGGTGGATCACTTCACCAGGCGCGTTTGA
Upstream 100 bases:
>100_bases TCGTCCTGATCGCCGGCAAGGGACACGAAACCGGACAAATCATCGGGTCGGGAGAGAATATGCGGGTCGAACCGTTTGAC GACGTACAGGTCGCACGCGA
Downstream 100 bases:
>100_bases TTGAGGGGGCCGGGACGACCGAATGCTCTATCTGATTGCCGAGTGGTTGGGTTTCGAAGGGGCGCTGAACCTCATCCGTT ACCAGACGTTCCGCACCGGG
Product: UDP-N-acetylmuramyl pentapeptide synthase
Products: NA
Alternate protein names: D-alanyl-D-alanine-adding enzyme; UDP-MurNAc-pentapeptide synthetase [H]
Number of amino acids: Translated: 498; Mature: 498
Protein sequence:
>498_residues MRGADFEKCLGRNRMSMHSALLKWPVTRRDALPVALWSAQEIAAATGGTASGDFQCAGVEMDSRDVRPGDLFVALKGESM DGHRFVEKAFAAGAAAALVERPVDWPHVLVEDTGAALEALAHAARERADAKRIGVTGSVGKTGVKEAIFAALEKSSRGQA HRSVRSYNNHVGVPLSLARMPARSRYGVFEMGMNHAGEIAGLTDHVRPHVAVITTIAPAHIENLGSIEAIADAKAEIFEG LVKGGTAVIPADSEQYEQLRASAEKRGVTIVSFGRADHADVRLLDAIPAANGGSLVTAQVRDSRLCFTVAEPGEHWVSNA LAVLAAVQAAGGDLGAAGLALAELGGLKGRGARHHVAVTGGKALLIDESYNANPASMRATLRQLGQTPATRRIAVLGSMK ELGDFGPEFHRQLAEPMGEADLDYAVLVGDEMLALARHLGKAGSGTLGKTPAFAHCDGPAEAIAALQEYGLTAGDAILVK GSNSIGLGKLVDHFTRRV
Sequences:
>Translated_498_residues MRGADFEKCLGRNRMSMHSALLKWPVTRRDALPVALWSAQEIAAATGGTASGDFQCAGVEMDSRDVRPGDLFVALKGESM DGHRFVEKAFAAGAAAALVERPVDWPHVLVEDTGAALEALAHAARERADAKRIGVTGSVGKTGVKEAIFAALEKSSRGQA HRSVRSYNNHVGVPLSLARMPARSRYGVFEMGMNHAGEIAGLTDHVRPHVAVITTIAPAHIENLGSIEAIADAKAEIFEG LVKGGTAVIPADSEQYEQLRASAEKRGVTIVSFGRADHADVRLLDAIPAANGGSLVTAQVRDSRLCFTVAEPGEHWVSNA LAVLAAVQAAGGDLGAAGLALAELGGLKGRGARHHVAVTGGKALLIDESYNANPASMRATLRQLGQTPATRRIAVLGSMK ELGDFGPEFHRQLAEPMGEADLDYAVLVGDEMLALARHLGKAGSGTLGKTPAFAHCDGPAEAIAALQEYGLTAGDAILVK GSNSIGLGKLVDHFTRRV >Mature_498_residues MRGADFEKCLGRNRMSMHSALLKWPVTRRDALPVALWSAQEIAAATGGTASGDFQCAGVEMDSRDVRPGDLFVALKGESM DGHRFVEKAFAAGAAAALVERPVDWPHVLVEDTGAALEALAHAARERADAKRIGVTGSVGKTGVKEAIFAALEKSSRGQA HRSVRSYNNHVGVPLSLARMPARSRYGVFEMGMNHAGEIAGLTDHVRPHVAVITTIAPAHIENLGSIEAIADAKAEIFEG LVKGGTAVIPADSEQYEQLRASAEKRGVTIVSFGRADHADVRLLDAIPAANGGSLVTAQVRDSRLCFTVAEPGEHWVSNA LAVLAAVQAAGGDLGAAGLALAELGGLKGRGARHHVAVTGGKALLIDESYNANPASMRATLRQLGQTPATRRIAVLGSMK ELGDFGPEFHRQLAEPMGEADLDYAVLVGDEMLALARHLGKAGSGTLGKTPAFAHCDGPAEAIAALQEYGLTAGDAILVK GSNSIGLGKLVDHFTRRV
Specific function: Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein [H]
COG id: COG0770
COG function: function code M; UDP-N-acetylmuramyl pentapeptide synthase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MurCDEF family [H]
Homologues:
Organism=Escherichia coli, GI1786274, Length=386, Percent_Identity=36.5284974093264, Blast_Score=190, Evalue=2e-49,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004101 - InterPro: IPR013221 - InterPro: IPR000713 - InterPro: IPR005863 [H]
Pfam domain/function: PF01225 Mur_ligase; PF02875 Mur_ligase_C; PF08245 Mur_ligase_M [H]
EC number: =6.3.2.10 [H]
Molecular weight: Translated: 52100; Mature: 52100
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGADFEKCLGRNRMSMHSALLKWPVTRRDALPVALWSAQEIAAATGGTASGDFQCAGVE CCCCCHHHHHCCCHHHHHHHHHHCCCCCCCCCCEEEECHHHHHHHCCCCCCCCEEEEEEE MDSRDVRPGDLFVALKGESMDGHRFVEKAFAAGAAAALVERPVDWPHVLVEDTGAALEAL CCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHH AHAARERADAKRIGVTGSVGKTGVKEAIFAALEKSSRGQAHRSVRSYNNHVGVPLSLARM HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHC PARSRYGVFEMGMNHAGEIAGLTDHVRPHVAVITTIAPAHIENLGSIEAIADAKAEIFEG CCCCCCCHHHHCCCCCCCCCCCHHHCCCCEEEEEEECHHHHHCCCCHHHHHHHHHHHHHH LVKGGTAVIPADSEQYEQLRASAEKRGVTIVSFGRADHADVRLLDAIPAANGGSLVTAQV HHCCCCEEECCCHHHHHHHHHHHHHCCEEEEEECCCCCCCEEEEECCCCCCCCCEEEEEE RDSRLCFTVAEPGEHWVSNALAVLAAVQAAGGDLGAAGLALAELGGLKGRGARHHVAVTG CCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCEEEEEEC GKALLIDESYNANPASMRATLRQLGQTPATRRIAVLGSMKELGDFGPEFHRQLAEPMGEA CEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCHHHHHCCCHHHHHHHHHHCCCC DLDYAVLVGDEMLALARHLGKAGSGTLGKTPAFAHCDGPAEAIAALQEYGLTAGDAILVK CCCEEEEECHHHHHHHHHHCCCCCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCEEEEE GSNSIGLGKLVDHFTRRV CCCCCCHHHHHHHHHHCC >Mature Secondary Structure MRGADFEKCLGRNRMSMHSALLKWPVTRRDALPVALWSAQEIAAATGGTASGDFQCAGVE CCCCCHHHHHCCCHHHHHHHHHHCCCCCCCCCCEEEECHHHHHHHCCCCCCCCEEEEEEE MDSRDVRPGDLFVALKGESMDGHRFVEKAFAAGAAAALVERPVDWPHVLVEDTGAALEAL CCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHH AHAARERADAKRIGVTGSVGKTGVKEAIFAALEKSSRGQAHRSVRSYNNHVGVPLSLARM HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHC PARSRYGVFEMGMNHAGEIAGLTDHVRPHVAVITTIAPAHIENLGSIEAIADAKAEIFEG CCCCCCCHHHHCCCCCCCCCCCHHHCCCCEEEEEEECHHHHHCCCCHHHHHHHHHHHHHH LVKGGTAVIPADSEQYEQLRASAEKRGVTIVSFGRADHADVRLLDAIPAANGGSLVTAQV HHCCCCEEECCCHHHHHHHHHHHHHCCEEEEEECCCCCCCEEEEECCCCCCCCCEEEEEE RDSRLCFTVAEPGEHWVSNALAVLAAVQAAGGDLGAAGLALAELGGLKGRGARHHVAVTG CCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCEEEEEEC GKALLIDESYNANPASMRATLRQLGQTPATRRIAVLGSMKELGDFGPEFHRQLAEPMGEA CEEEEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCHHHHHCCCHHHHHHHHHHCCCC DLDYAVLVGDEMLALARHLGKAGSGTLGKTPAFAHCDGPAEAIAALQEYGLTAGDAILVK CCCEEEEECHHHHHHHHHHCCCCCCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCEEEEE GSNSIGLGKLVDHFTRRV CCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11557893 [H]