| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is 85060065
Identifier: 85060065
GI number: 85060065
Start: 3592128
End: 3592589
Strand: Reverse
Name: 85060065
Synonym: SG2087
Alternate gene names: NA
Gene position: 3592589-3592128 (Counterclockwise)
Preceding gene: 85060066
Following gene: 85060064
Centisome position: 86.13
GC content: 61.47
Gene sequence:
>462_bases ATGCGTTTGATGCGTGAGATTGAACGCCTTCGCGCGCATAGCGAGCAGCTCCGGCAGACATTGACGGCGACTCTTGCGGC GCTGGCGCGGCAAAGGGAGACGCTTGCCGCACGGCTCAGGATGCTGGCGGAGCAGCAGCAGGACGTCGTGCAGCAAAGGG CGCTTGCATGGCCACAGGGGATCGTCGATCGCCGTGCTTTGATGCTGCACCAGCGTCGGTTGATGGTCCGACGCGAGGAA AGTCGACAGTTGGCGGAACAGCAGCGGCAGCTGGAGCAGGCGATGATGGCGCTGGAGAAGCAGCAGCGCGATGCGCTTTG CCAGTGGCGTGTGTGGGACCGTAAGCGGGAAAAATACGATGGCTGGCTTGAGCGACAGCGGCACGCCCATCGGCTAACGC AATTGTACCGTCAGGAGACAGAAACAGAGGAGATGATGACATGGAACCGCTCGCGAGGATAA
Upstream 100 bases:
>100_bases GAAAATGACCGGGCGCATGCCCAAAAACAGGCGCTATGGGATTTTCTGCGTCAAGACGCCGACCAGGCGGAGGAATTTGG CCAGACGCTGAGGTTAATGC
Downstream 100 bases:
>100_bases AGGACTGCCCGTCGGCAACGGCTGTGTCCGCGGCCATAATGCCGCTGGAGGAGAGAGTTTCCGCTTCATCGCCTGAGGGG GGGGATCCTGCGCAGCGCAG
Product: type III secretion apparatus SpaM
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MRLMREIERLRAHSEQLRQTLTATLAALARQRETLAARLRMLAEQQQDVVQQRALAWPQGIVDRRALMLHQRRLMVRREE SRQLAEQQRQLEQAMMALEKQQRDALCQWRVWDRKREKYDGWLERQRHAHRLTQLYRQETETEEMMTWNRSRG
Sequences:
>Translated_153_residues MRLMREIERLRAHSEQLRQTLTATLAALARQRETLAARLRMLAEQQQDVVQQRALAWPQGIVDRRALMLHQRRLMVRREE SRQLAEQQRQLEQAMMALEKQQRDALCQWRVWDRKREKYDGWLERQRHAHRLTQLYRQETETEEMMTWNRSRG >Mature_153_residues MRLMREIERLRAHSEQLRQTLTATLAALARQRETLAARLRMLAEQQQDVVQQRALAWPQGIVDRRALMLHQRRLMVRREE SRQLAEQQRQLEQAMMALEKQQRDALCQWRVWDRKREKYDGWLERQRHAHRLTQLYRQETETEEMMTWNRSRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18773; Mature: 18773
Theoretical pI: Translated: 11.65; Mature: 11.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 5.9 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLMREIERLRAHSEQLRQTLTATLAALARQRETLAARLRMLAEQQQDVVQQRALAWPQG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH IVDRRALMLHQRRLMVRREESRQLAEQQRQLEQAMMALEKQQRDALCQWRVWDRKREKYD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GWLERQRHAHRLTQLYRQETETEEMMTWNRSRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRLMREIERLRAHSEQLRQTLTATLAALARQRETLAARLRMLAEQQQDVVQQRALAWPQG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH IVDRRALMLHQRRLMVRREESRQLAEQQRQLEQAMMALEKQQRDALCQWRVWDRKREKYD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GWLERQRHAHRLTQLYRQETETEEMMTWNRSRG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA