| Definition | Sodalis glossinidius str. 'morsitans', complete genome. |
|---|---|
| Accession | NC_007712 |
| Length | 4,171,146 |
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The map label for this gene is 85060064
Identifier: 85060064
GI number: 85060064
Start: 3591319
End: 3592149
Strand: Reverse
Name: 85060064
Synonym: SG2086
Alternate gene names: NA
Gene position: 3592149-3591319 (Counterclockwise)
Preceding gene: 85060065
Following gene: 85060063
Centisome position: 86.12
GC content: 65.22
Gene sequence:
>831_bases ATGGAACCGCTCGCGAGGATAAAGGACTGCCCGTCGGCAACGGCTGTGTCCGCGGCCATAATGCCGCTGGAGGAGAGAGT TTCCGCTTCATCGCCTGAGGGGGGGGATCCTGCGCAGCGCAGCGCGCTGCCGTCGACAGGTGATGGGGAACGTCAGTGGG GGCAGGACGCCGCCACGCACGATCTTGCGCTGGAGGAACTACCGCCCGCATGGGGGGAACAGACGTCCTCGTCTCCTTAC CGACTGAAGGCGCAGTGGCGCAGGGCCGAGGCAGGCAAAGGGCTCCGGTATGGCGGCGGTCAACGCACGGCGCGATCGAC GCTCTTGCCTCTGCGCATCCATGCTACTGGGCAGCATCCGCCCGGAGCGGGTAAGCTGCGCGCGCCCGTTGTGCAGTCGG AGCCGCGATTGGCGGTGGAAACCCTCAATAATGCTCTGACCAGAGAGCTAGAGCAGAGTCAGTGGCTGACGCTGCAGCGC GCTGCCGATCCGCTGCTGATGTCTGCCGCGCTTGCCGAGCGCCCTGAACCTAAAAGCGTTCGCGGTCGGCAGAAGCAACA GACACCGCAGATGCGTGAGCCGCAGATCTTGTCGGCGCCTGTGCGGCAGGAGAGGGCGGTCGTGGGTACGCAGTGGATCT ACCGCTTTCGCGGCCAAGAAGGGGAGTTCGTTCAAATTCAGGCGGCGGATGACGCAGGGGCGTACCGGCTGATCCCATCC AGCCATCAAATGAGGGAACGCCTGACGGCACATCTTCATGGCGCGCCGTCAGGCGTTTGCCTGATGAATGTTCCGGCAGT ACCGCCGCCGCTGCCGGAGGCGCCGACGTGA
Upstream 100 bases:
>100_bases GTAAGCGGGAAAAATACGATGGCTGGCTTGAGCGACAGCGGCACGCCCATCGGCTAACGCAATTGTACCGTCAGGAGACA GAAACAGAGGAGATGATGAC
Downstream 100 bases:
>100_bases AGGCATTTCGGTTACGCAGACTGACGCCCGCCGACAGCCGCTGGCGGCGGCTGTCGGCGGCATGGAACGCCCAAGGCATG GCCGCCCGTCTGCGCTGCCC
Product: putative type III secretion apparatus
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MEPLARIKDCPSATAVSAAIMPLEERVSASSPEGGDPAQRSALPSTGDGERQWGQDAATHDLALEELPPAWGEQTSSSPY RLKAQWRRAEAGKGLRYGGGQRTARSTLLPLRIHATGQHPPGAGKLRAPVVQSEPRLAVETLNNALTRELEQSQWLTLQR AADPLLMSAALAERPEPKSVRGRQKQQTPQMREPQILSAPVRQERAVVGTQWIYRFRGQEGEFVQIQAADDAGAYRLIPS SHQMRERLTAHLHGAPSGVCLMNVPAVPPPLPEAPT
Sequences:
>Translated_276_residues MEPLARIKDCPSATAVSAAIMPLEERVSASSPEGGDPAQRSALPSTGDGERQWGQDAATHDLALEELPPAWGEQTSSSPY RLKAQWRRAEAGKGLRYGGGQRTARSTLLPLRIHATGQHPPGAGKLRAPVVQSEPRLAVETLNNALTRELEQSQWLTLQR AADPLLMSAALAERPEPKSVRGRQKQQTPQMREPQILSAPVRQERAVVGTQWIYRFRGQEGEFVQIQAADDAGAYRLIPS SHQMRERLTAHLHGAPSGVCLMNVPAVPPPLPEAPT >Mature_276_residues MEPLARIKDCPSATAVSAAIMPLEERVSASSPEGGDPAQRSALPSTGDGERQWGQDAATHDLALEELPPAWGEQTSSSPY RLKAQWRRAEAGKGLRYGGGQRTARSTLLPLRIHATGQHPPGAGKLRAPVVQSEPRLAVETLNNALTRELEQSQWLTLQR AADPLLMSAALAERPEPKSVRGRQKQQTPQMREPQILSAPVRQERAVVGTQWIYRFRGQEGEFVQIQAADDAGAYRLIPS SHQMRERLTAHLHGAPSGVCLMNVPAVPPPLPEAPT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30018; Mature: 30018
Theoretical pI: Translated: 9.17; Mature: 9.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEPLARIKDCPSATAVSAAIMPLEERVSASSPEGGDPAQRSALPSTGDGERQWGQDAATH CCHHHHHHCCCCHHHHHHHHHCHHHHHCCCCCCCCCHHHHHCCCCCCCCHHHHCCCHHHH DLALEELPPAWGEQTSSSPYRLKAQWRRAEAGKGLRYGGGQRTARSTLLPLRIHATGQHP HHHHHHCCCCCCCCCCCCCEEEHHHHHHHHCCCCCCCCCCCHHHHHCEEEEEEEECCCCC PGAGKLRAPVVQSEPRLAVETLNNALTRELEQSQWLTLQRAADPLLMSAALAERPEPKSV CCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCC RGRQKQQTPQMREPQILSAPVRQERAVVGTQWIYRFRGQEGEFVQIQAADDAGAYRLIPS CCCHHHCCCCCCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEECCC SHQMRERLTAHLHGAPSGVCLMNVPAVPPPLPEAPT HHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCC >Mature Secondary Structure MEPLARIKDCPSATAVSAAIMPLEERVSASSPEGGDPAQRSALPSTGDGERQWGQDAATH CCHHHHHHCCCCHHHHHHHHHCHHHHHCCCCCCCCCHHHHHCCCCCCCCHHHHCCCHHHH DLALEELPPAWGEQTSSSPYRLKAQWRRAEAGKGLRYGGGQRTARSTLLPLRIHATGQHP HHHHHHCCCCCCCCCCCCCEEEHHHHHHHHCCCCCCCCCCCHHHHHCEEEEEEEECCCCC PGAGKLRAPVVQSEPRLAVETLNNALTRELEQSQWLTLQRAADPLLMSAALAERPEPKSV CCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCC RGRQKQQTPQMREPQILSAPVRQERAVVGTQWIYRFRGQEGEFVQIQAADDAGAYRLIPS CCCHHHCCCCCCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEECCC SHQMRERLTAHLHGAPSGVCLMNVPAVPPPLPEAPT HHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA