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The map label for this gene is 84625539

Identifier: 84625539

GI number: 84625539

Start: 4381832

End: 4382188

Strand: Reverse

Name: 84625539

Synonym: XOO_3882

Alternate gene names: NA

Gene position: 4382188-4381832 (Counterclockwise)

Preceding gene: 84625541

Following gene: 84625538

Centisome position: 88.7

GC content: 59.1

Gene sequence:

>357_bases
ATGCGCGAGAAGAACGATCCAAGTGACGTGAGCCGTGAGCGGTTCGAGCAAATCCGCCCGATTCTGGAGCAAGCCCGCAA
GCGCACCAAGCCTGTGACAGTGGATATGTATGAGGTGTGGTGCGCAGTGCTGTATCTGCTACGGACAGGTTGCCCGTGGC
GTGCGTTGCCCAGTGACTGTCCGAAGTGGCGCACGGTGCAGTCCTACTTTGCCAAGTGGAGCGAAGTGGACGATGAAGGA
ATGAGCCTGCTGGAGCGGGCGCTTAAAAAATCAGGTTGGCGCGGCCCGCGAGAAACAGGGGCGCAAGGCCTGCAGTACGT
TCTTGATCGTGGACGCGCAGAGCGTGAAGAACAGTGA

Upstream 100 bases:

>100_bases
GCTCTGCGCGGTCCACACCCAACTGACACCGTCCGCCAAGGTTTTTAAGCCGCTCTTAGAACCTGTTCACAATCTTATTC
AAACCGTGCAAACTCCACGA

Downstream 100 bases:

>100_bases
TACAGCCGGCCAGAAAGGCTATGACGCGGGCAAGAAGGTATCGGGGATCAAGCGCCACATCGCGGTGGATACGCAAGGCT
TTCCACATGCCGTTGCGGTG

Product: ISXo3 transposase orfA

Products: NA

Alternate protein names: Transposase And Inactivated Derivatives; IS4 Family Transposase; Transposase-Like Protein; Isxo3 Transposase Protein; Transposase Fragment

Number of amino acids: Translated: 118; Mature: 118

Protein sequence:

>118_residues
MREKNDPSDVSRERFEQIRPILEQARKRTKPVTVDMYEVWCAVLYLLRTGCPWRALPSDCPKWRTVQSYFAKWSEVDDEG
MSLLERALKKSGWRGPRETGAQGLQYVLDRGRAEREEQ

Sequences:

>Translated_118_residues
MREKNDPSDVSRERFEQIRPILEQARKRTKPVTVDMYEVWCAVLYLLRTGCPWRALPSDCPKWRTVQSYFAKWSEVDDEG
MSLLERALKKSGWRGPRETGAQGLQYVLDRGRAEREEQ
>Mature_118_residues
MREKNDPSDVSRERFEQIRPILEQARKRTKPVTVDMYEVWCAVLYLLRTGCPWRALPSDCPKWRTVQSYFAKWSEVDDEG
MSLLERALKKSGWRGPRETGAQGLQYVLDRGRAEREEQ

Specific function: Unknown

COG id: COG3293

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13920; Mature: 13920

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREKNDPSDVSRERFEQIRPILEQARKRTKPVTVDMYEVWCAVLYLLRTGCPWRALPSDC
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
PKWRTVQSYFAKWSEVDDEGMSLLERALKKSGWRGPRETGAQGLQYVLDRGRAEREEQ
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MREKNDPSDVSRERFEQIRPILEQARKRTKPVTVDMYEVWCAVLYLLRTGCPWRALPSDC
CCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC
PKWRTVQSYFAKWSEVDDEGMSLLERALKKSGWRGPRETGAQGLQYVLDRGRAEREEQ
CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA