Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
---|---|
Accession | NC_007705 |
Length | 4,940,217 |
Click here to switch to the map view.
The map label for this gene is 84625518
Identifier: 84625518
GI number: 84625518
Start: 4365102
End: 4366079
Strand: Reverse
Name: 84625518
Synonym: XOO_3861
Alternate gene names: NA
Gene position: 4366079-4365102 (Counterclockwise)
Preceding gene: 84625519
Following gene: 84625517
Centisome position: 88.38
GC content: 68.61
Gene sequence:
>978_bases ATGACCGAAATGCCCGCTCCCACGCGACGCTTTCCCTTGGCATGGCTGCTGCTTGTCGTGGCCGTAGCGGCCGCTGGCGT GGCGCTGTCCCTGAGCTGGCGCGCGTGGCAGAGCTATCAGGCCGCACAGTTGCAGGCCGCGCAGGCGCAGCAGCAACGCT GGGACGGCACGCAGCAGATGCTGGAAACGCTGCGCCGCGATCAGCGCCTGGCCAATGACCGCCTGCAGGATGCGGCCGCC ACCAACCGCGTGCTGCGCGATGAAATGCTGGGCCTGAGCCAACGTAGCGCGTTGCTCGAAGACACCGTGCAGAAGCTGGC CGACCGCAATCGTCACGGCCCGCAGGCGCTGCGCCTGGATGAAGTGGAACTGCTGCTGCGCCTCGGCCAGCAACGGCTGA GCATCGCCGGCGATGCCAATGGTGCCCGGCGTGCCTACGCGCTGGCCAATGGCGCGCTCAACGGTATCGACGACCCCGGG TACCTCAATTTGCGTCAGGCTTTGGTGCAGGAGCGCGACGCCCTGGATCGCCTCGGCGCCGGCCCGCAGGCGGAAGTCGG TCAGACGCTGGACAGCTTGGCGGCCGAGTTGCAGTGCCTGCCGGAGCAGGCCGCACAGAACAGCGACACGGCGCAACCGT GGTGGCGAAAGGTGCTGTCGCCGTTGGTGGATATCCGTCCCAGCCGCGGCGATGCCTTGCTCACCGGTGGCGATCGGCAG GCCGCGCGTGATGCCTTGCAGATCGAAATCAGCCTGGCCCGCGCGGCCGCCGAACGTGGCGATGCTGCCGGGTTCGCGCA ATCGCTGCGCCGCGTGGATACCTGGACCACCCGGCTGTGCCCGGACTCGCCGCAACGTCGTCAGCTGCGTGCACGCCTGC GCAGCCTGCAACGAGCGCCACTGCGTCCGCGCCTGCCGGAACTGGGCACCACCCTGCTGCAACTGCAGGCCATGCGTGAA GGGAGATCCACCCAATGA
Upstream 100 bases:
>100_bases GCGAACTCCAGCACAGCTTGCGGCTGTCAGCCGCTGCACGCCATGCTGTGGCAGATGACCGCGGCGCACGCGCCGGTTGT GACCGCCCGAGGATGTCCGA
Downstream 100 bases:
>100_bases AAGTCTTGCGTACCGTCTTGATTCTGTTGGTCGCCGTGGCGCTGGGCGTGCTTGGCGCGCAGTGGCTGTCGCACCAGAAC AGCTACGACCTGGGCAATGT
Product: hypothetical protein
Products: NA
Alternate protein names: Uroporphyrin-III C-Methyltransferase Protein
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MTEMPAPTRRFPLAWLLLVVAVAAAGVALSLSWRAWQSYQAAQLQAAQAQQQRWDGTQQMLETLRRDQRLANDRLQDAAA TNRVLRDEMLGLSQRSALLEDTVQKLADRNRHGPQALRLDEVELLLRLGQQRLSIAGDANGARRAYALANGALNGIDDPG YLNLRQALVQERDALDRLGAGPQAEVGQTLDSLAAELQCLPEQAAQNSDTAQPWWRKVLSPLVDIRPSRGDALLTGGDRQ AARDALQIEISLARAAAERGDAAGFAQSLRRVDTWTTRLCPDSPQRRQLRARLRSLQRAPLRPRLPELGTTLLQLQAMRE GRSTQ
Sequences:
>Translated_325_residues MTEMPAPTRRFPLAWLLLVVAVAAAGVALSLSWRAWQSYQAAQLQAAQAQQQRWDGTQQMLETLRRDQRLANDRLQDAAA TNRVLRDEMLGLSQRSALLEDTVQKLADRNRHGPQALRLDEVELLLRLGQQRLSIAGDANGARRAYALANGALNGIDDPG YLNLRQALVQERDALDRLGAGPQAEVGQTLDSLAAELQCLPEQAAQNSDTAQPWWRKVLSPLVDIRPSRGDALLTGGDRQ AARDALQIEISLARAAAERGDAAGFAQSLRRVDTWTTRLCPDSPQRRQLRARLRSLQRAPLRPRLPELGTTLLQLQAMRE GRSTQ >Mature_324_residues TEMPAPTRRFPLAWLLLVVAVAAAGVALSLSWRAWQSYQAAQLQAAQAQQQRWDGTQQMLETLRRDQRLANDRLQDAAAT NRVLRDEMLGLSQRSALLEDTVQKLADRNRHGPQALRLDEVELLLRLGQQRLSIAGDANGARRAYALANGALNGIDDPGY LNLRQALVQERDALDRLGAGPQAEVGQTLDSLAAELQCLPEQAAQNSDTAQPWWRKVLSPLVDIRPSRGDALLTGGDRQA ARDALQIEISLARAAAERGDAAGFAQSLRRVDTWTTRLCPDSPQRRQLRARLRSLQRAPLRPRLPELGTTLLQLQAMREG RSTQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35988; Mature: 35857
Theoretical pI: Translated: 10.73; Mature: 10.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEMPAPTRRFPLAWLLLVVAVAAAGVALSLSWRAWQSYQAAQLQAAQAQQQRWDGTQQM CCCCCCCCCHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHH LETLRRDQRLANDRLQDAAATNRVLRDEMLGLSQRSALLEDTVQKLADRNRHGPQALRLD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCHHHHH EVELLLRLGQQRLSIAGDANGARRAYALANGALNGIDDPGYLNLRQALVQERDALDRLGA HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC GPQAEVGQTLDSLAAELQCLPEQAAQNSDTAQPWWRKVLSPLVDIRPSRGDALLTGGDRQ CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCHH AARDALQIEISLARAAAERGDAAGFAQSLRRVDTWTTRLCPDSPQRRQLRARLRSLQRAP HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC LRPRLPELGTTLLQLQAMREGRSTQ CCCCCHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TEMPAPTRRFPLAWLLLVVAVAAAGVALSLSWRAWQSYQAAQLQAAQAQQQRWDGTQQM CCCCCCCCHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHH LETLRRDQRLANDRLQDAAATNRVLRDEMLGLSQRSALLEDTVQKLADRNRHGPQALRLD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCHHHHH EVELLLRLGQQRLSIAGDANGARRAYALANGALNGIDDPGYLNLRQALVQERDALDRLGA HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC GPQAEVGQTLDSLAAELQCLPEQAAQNSDTAQPWWRKVLSPLVDIRPSRGDALLTGGDRQ CCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCHH AARDALQIEISLARAAAERGDAAGFAQSLRRVDTWTTRLCPDSPQRRQLRARLRSLQRAP HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCC LRPRLPELGTTLLQLQAMREGRSTQ CCCCCHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA