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The map label for this gene is 84625517

Identifier: 84625517

GI number: 84625517

Start: 4363840

End: 4365105

Strand: Reverse

Name: 84625517

Synonym: XOO_3860

Alternate gene names: NA

Gene position: 4365105-4363840 (Counterclockwise)

Preceding gene: 84625518

Following gene: 84625514

Centisome position: 88.36

GC content: 66.03

Gene sequence:

>1266_bases
ATGAAAGTCTTGCGTACCGTCTTGATTCTGTTGGTCGCCGTGGCGCTGGGCGTGCTTGGCGCGCAGTGGCTGTCGCACCA
GAACAGCTACGACCTGGGCAATGTAGTGGTCAGCGTAGGTGGTAACGACTACCGCGCCGCCATGCCGCAGGCGCTGCTGA
TGCTGTTGATCGCCGTGCTGGTGCTGTGGCTGCTATGGACGTTGATCAGCCTGCCGTTTCGCGTGTGGGGTAAATACCGC
CGCAAGAAGGGCCGTGCGCGTTTGATCGAAGGCCTGCGCGCTGCCGATCATGGCCAGTGGCAGCGTGCCGAGCGGCTGCT
AGTTAGTGCTAGCGAAGACGATGAGGTGAGCGGCATTGCTCTGGCCAGCGCAGTACGCGTGGCCGATGCACGCGGCGATG
AAGCCGCAGCCACGGCACTTGCACAACAGCTTGCCGAGCGCGACCCCACCGCATACGCACTGCTGCAGGGCGAGCGACAT
CTGGCGCGCCAGCGCCCGGTGGAAGCGATCAATGCGCTCGATAGCGCCAATGCGCAACCGTTGCCGGCACGCGGCCTGCT
GTTGCGCACACATGCCCTGCCCCAGATCGGCCGTGCCGATGAAGCCTACGGCCAGCTCGGCGCTTTGCGTCAGCAGGCGG
TGCTGGCCCCCGATGCCTACAGCGCGCTGGAAGCGACGCTGGCCGAGCAGACCCTGTTGCAGGCCAGCGACGCCAATGCG
CTGGCCGAGCGCTGGGAAGCATTGCCCAAAGCATTGCGCACCTGTCCGGCGGTGGTCGGCGCCTATGCGCAGCGCGCGGC
CGTACTGCATTGGGACGATGCAGCCGTGCACAGCCTGGAGCAGGCGCTGGACGCACAGTGGGACGAATCGCTGGTGCGCT
TGTACGGCGTGCTGCCGTTGGAAAAATACGATTCGCGCCGCGCCAGTGCGCAGCGCTGGTTGACCCCGTATCCGGACAGC
CCGGGCCTGCTGCTGACACTGGCGCGGTTGGCGCGTCATCAACAGCAGTGGTCGCAGGCCGAAGAATTCCTGCACCGCGC
GATCGCTAACGGCGCCGGTAGCGACGCATGGGAAGAGCTGGGACACGGCTTTGCCGCATCGGGCGACCTGCTGTCGGCAC
AGCATTGCTACGCCAGTGCCTTGCGCGCTGCACGCGGGGAACCGGTGCACGAAGGCATGCCGCAGCAGGCGTTGCGCGGG
CCGATCGTGGCGGCGTACGACACCCAGCCAGTCGATCCACGCGCAGCGGACGATCGCATTCTTTAA

Upstream 100 bases:

>100_bases
GCCTGCGCAGCCTGCAACGAGCGCCACTGCGTCCGCGCCTGCCGGAACTGGGCACCACCCTGCTGCAACTGCAGGCCATG
CGTGAAGGGAGATCCACCCA

Downstream 100 bases:

>100_bases
TCGAGACAGCGGCGGTATGTCGTCTGCATACCGCCGCACGTGTGTGGCTGATGCCGGTGCGGAATGCGCGTCCGGCGGGC
ATCCACTTCATCGAAGAAGT

Product: porphyrin biosynthesis protein

Products: NA

Alternate protein names: Porphyrin Biosynthesis Protein; Transmembrane HemY Porphyrin Biosynthesis Protein; HemY Domain-Containing Protein; HemY-Like Protein; HemY Protein

Number of amino acids: Translated: 421; Mature: 421

Protein sequence:

>421_residues
MKVLRTVLILLVAVALGVLGAQWLSHQNSYDLGNVVVSVGGNDYRAAMPQALLMLLIAVLVLWLLWTLISLPFRVWGKYR
RKKGRARLIEGLRAADHGQWQRAERLLVSASEDDEVSGIALASAVRVADARGDEAAATALAQQLAERDPTAYALLQGERH
LARQRPVEAINALDSANAQPLPARGLLLRTHALPQIGRADEAYGQLGALRQQAVLAPDAYSALEATLAEQTLLQASDANA
LAERWEALPKALRTCPAVVGAYAQRAAVLHWDDAAVHSLEQALDAQWDESLVRLYGVLPLEKYDSRRASAQRWLTPYPDS
PGLLLTLARLARHQQQWSQAEEFLHRAIANGAGSDAWEELGHGFAASGDLLSAQHCYASALRAARGEPVHEGMPQQALRG
PIVAAYDTQPVDPRAADDRIL

Sequences:

>Translated_421_residues
MKVLRTVLILLVAVALGVLGAQWLSHQNSYDLGNVVVSVGGNDYRAAMPQALLMLLIAVLVLWLLWTLISLPFRVWGKYR
RKKGRARLIEGLRAADHGQWQRAERLLVSASEDDEVSGIALASAVRVADARGDEAAATALAQQLAERDPTAYALLQGERH
LARQRPVEAINALDSANAQPLPARGLLLRTHALPQIGRADEAYGQLGALRQQAVLAPDAYSALEATLAEQTLLQASDANA
LAERWEALPKALRTCPAVVGAYAQRAAVLHWDDAAVHSLEQALDAQWDESLVRLYGVLPLEKYDSRRASAQRWLTPYPDS
PGLLLTLARLARHQQQWSQAEEFLHRAIANGAGSDAWEELGHGFAASGDLLSAQHCYASALRAARGEPVHEGMPQQALRG
PIVAAYDTQPVDPRAADDRIL
>Mature_421_residues
MKVLRTVLILLVAVALGVLGAQWLSHQNSYDLGNVVVSVGGNDYRAAMPQALLMLLIAVLVLWLLWTLISLPFRVWGKYR
RKKGRARLIEGLRAADHGQWQRAERLLVSASEDDEVSGIALASAVRVADARGDEAAATALAQQLAERDPTAYALLQGERH
LARQRPVEAINALDSANAQPLPARGLLLRTHALPQIGRADEAYGQLGALRQQAVLAPDAYSALEATLAEQTLLQASDANA
LAERWEALPKALRTCPAVVGAYAQRAAVLHWDDAAVHSLEQALDAQWDESLVRLYGVLPLEKYDSRRASAQRWLTPYPDS
PGLLLTLARLARHQQQWSQAEEFLHRAIANGAGSDAWEELGHGFAASGDLLSAQHCYASALRAARGEPVHEGMPQQALRG
PIVAAYDTQPVDPRAADDRIL

Specific function: Unknown

COG id: COG3071

COG function: function code H; Uncharacterized enzyme of heme biosynthesis

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45781; Mature: 45781

Theoretical pI: Translated: 6.59; Mature: 6.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVLRTVLILLVAVALGVLGAQWLSHQNSYDLGNVVVSVGGNDYRAAMPQALLMLLIAVL
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHH
VLWLLWTLISLPFRVWGKYRRKKGRARLIEGLRAADHGQWQRAERLLVSASEDDEVSGIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHH
LASAVRVADARGDEAAATALAQQLAERDPTAYALLQGERHLARQRPVEAINALDSANAQP
HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHCHHHHHHHCCHHHHHHHHCCCCCC
LPARGLLLRTHALPQIGRADEAYGQLGALRQQAVLAPDAYSALEATLAEQTLLQASDANA
CCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHH
LAERWEALPKALRTCPAVVGAYAQRAAVLHWDDAAVHSLEQALDAQWDESLVRLYGVLPL
HHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCH
EKYDSRRASAQRWLTPYPDSPGLLLTLARLARHQQQWSQAEEFLHRAIANGAGSDAWEEL
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
GHGFAASGDLLSAQHCYASALRAARGEPVHEGMPQQALRGPIVAAYDTQPVDPRAADDRI
CCCCCCCCCCHHHHHHHHHHHHHHCCCCHHCCCCHHHHCCCEEEECCCCCCCCCCCCCCC
L
C
>Mature Secondary Structure
MKVLRTVLILLVAVALGVLGAQWLSHQNSYDLGNVVVSVGGNDYRAAMPQALLMLLIAVL
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHH
VLWLLWTLISLPFRVWGKYRRKKGRARLIEGLRAADHGQWQRAERLLVSASEDDEVSGIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHH
LASAVRVADARGDEAAATALAQQLAERDPTAYALLQGERHLARQRPVEAINALDSANAQP
HHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHCHHHHHHHCCHHHHHHHHCCCCCC
LPARGLLLRTHALPQIGRADEAYGQLGALRQQAVLAPDAYSALEATLAEQTLLQASDANA
CCCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHH
LAERWEALPKALRTCPAVVGAYAQRAAVLHWDDAAVHSLEQALDAQWDESLVRLYGVLPL
HHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCH
EKYDSRRASAQRWLTPYPDSPGLLLTLARLARHQQQWSQAEEFLHRAIANGAGSDAWEEL
HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
GHGFAASGDLLSAQHCYASALRAARGEPVHEGMPQQALRGPIVAAYDTQPVDPRAADDRI
CCCCCCCCCCHHHHHHHHHHHHHHCCCCHHCCCCHHHHCCCEEEECCCCCCCCCCCCCCC
L
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA