Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

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The map label for this gene is sam [H]

Identifier: 84625464

GI number: 84625464

Start: 4311313

End: 4312188

Strand: Reverse

Name: sam [H]

Synonym: XOO_3807

Alternate gene names: 84625464

Gene position: 4312188-4311313 (Counterclockwise)

Preceding gene: 84625470

Following gene: 84625461

Centisome position: 87.29

GC content: 62.21

Gene sequence:

>876_bases
ATGTTGAAGGGTGTGGTGTTGGGGTTCGCCTGCTATGCGGCCTATTCGATCAGCGATGCGTTCGTGAAGCTGCTCGAAGG
TACGCTGCCAGTCTACGAGGTGCTGTTTCTGGGCGCGCTGTTGATGCTGCTGGCGGTGCCGTTCCTGAAAAAGCCCGACG
ACCAGCTACGCGAACTGGTGATGGCCAAGCAGCCCGCACTGTGGCTGCTGCGCGCGCTCACCGGTGCCATCGGCAATCTC
ACCTCGGTGATCGCCTTTACCACTCTGCCGATGGCCGAAGCGTTCGCGCTGATCTTTCTGATGCCGATCTTCGTCACCGT
GCTGTCGGTGATCTTCCTCAAGGAAGACGTGCACTGGCGACGCTGGTCGGCGGTGATCGTCGGCTTCATCGGTGTGCTGA
TCGTGCTGCGTCCCGGCTTTCGGCACCTCACCCAAGGGCATGTGGCGGCGATTGTGTGCGGCCTGGTCGGTGCCATCTCG
GTGATCGCCTTGCGCATGGCCGGGCATGGTGAAAAGCGCTTGACCTTGTATGGCGCTGGCGTGATCGGCCCGTTGATAAT
GGGCGGGATCATGATGCTGCCGACCTTCGTCTGGCCCACGCTGTCCCAATGGGGCCTGCTGGCGGGTTACGGTTTGCTCG
CCGGGCTTGCCGCCATCTGCATGATGTACGCCACGCGCATGTCCCCGGTCAGCCTGGTCGCACCGACCCAATACAGCCAG
ATGCTATGGGCCATCGCCTTCGGCTACCTGCTGTTTCATGATCATCTGGACTGGCCGATGGCCGTGGGCATCGCGCTGAT
CCTGGGCGCTGGTCTGTTCACCCTGGTGCGTGAGGAACAGGTGTCGCGTTGGTGGCGGCGGACGAAGATCGTGTGA

Upstream 100 bases:

>100_bases
CGACTGCGCACGCCGTTTCGTTGACACACGCGGCACCGCATACTGCATGCAATCCGTATCGACACCTCGTTCGATCGGCG
TCAACTGTGGGGTGTGGGCA

Downstream 100 bases:

>100_bases
GTGCTGCGTCGTGCCGGCCGGTTGACTGGCAGTGGGGCGGGATTCGAAAAAGCACCGGTCCGTCAGGGGCACAGACATCG
AGGCAGCTGCGATCCCCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MLKGVVLGFACYAAYSISDAFVKLLEGTLPVYEVLFLGALLMLLAVPFLKKPDDQLRELVMAKQPALWLLRALTGAIGNL
TSVIAFTTLPMAEAFALIFLMPIFVTVLSVIFLKEDVHWRRWSAVIVGFIGVLIVLRPGFRHLTQGHVAAIVCGLVGAIS
VIALRMAGHGEKRLTLYGAGVIGPLIMGGIMMLPTFVWPTLSQWGLLAGYGLLAGLAAICMMYATRMSPVSLVAPTQYSQ
MLWAIAFGYLLFHDHLDWPMAVGIALILGAGLFTLVREEQVSRWWRRTKIV

Sequences:

>Translated_291_residues
MLKGVVLGFACYAAYSISDAFVKLLEGTLPVYEVLFLGALLMLLAVPFLKKPDDQLRELVMAKQPALWLLRALTGAIGNL
TSVIAFTTLPMAEAFALIFLMPIFVTVLSVIFLKEDVHWRRWSAVIVGFIGVLIVLRPGFRHLTQGHVAAIVCGLVGAIS
VIALRMAGHGEKRLTLYGAGVIGPLIMGGIMMLPTFVWPTLSQWGLLAGYGLLAGLAAICMMYATRMSPVSLVAPTQYSQ
MLWAIAFGYLLFHDHLDWPMAVGIALILGAGLFTLVREEQVSRWWRRTKIV
>Mature_291_residues
MLKGVVLGFACYAAYSISDAFVKLLEGTLPVYEVLFLGALLMLLAVPFLKKPDDQLRELVMAKQPALWLLRALTGAIGNL
TSVIAFTTLPMAEAFALIFLMPIFVTVLSVIFLKEDVHWRRWSAVIVGFIGVLIVLRPGFRHLTQGHVAAIVCGLVGAIS
VIALRMAGHGEKRLTLYGAGVIGPLIMGGIMMLPTFVWPTLSQWGLLAGYGLLAGLAAICMMYATRMSPVSLVAPTQYSQ
MLWAIAFGYLLFHDHLDWPMAVGIALILGAGLFTLVREEQVSRWWRRTKIV

Specific function: Transports S-adenosylmethionine [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the drug/metabolite transporter (DMT) superfamily. 10 TMS drug/metabolite exporter (TC 2.A.7.3) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000620 [H]

Pfam domain/function: PF00892 DUF6 [H]

EC number: NA

Molecular weight: Translated: 31888; Mature: 31888

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKGVVLGFACYAAYSISDAFVKLLEGTLPVYEVLFLGALLMLLAVPFLKKPDDQLRELV
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
MAKQPALWLLRALTGAIGNLTSVIAFTTLPMAEAFALIFLMPIFVTVLSVIFLKEDVHWR
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
RWSAVIVGFIGVLIVLRPGFRHLTQGHVAAIVCGLVGAISVIALRMAGHGEKRLTLYGAG
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECH
VIGPLIMGGIMMLPTFVWPTLSQWGLLAGYGLLAGLAAICMMYATRMSPVSLVAPTQYSQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHH
MLWAIAFGYLLFHDHLDWPMAVGIALILGAGLFTLVREEQVSRWWRRTKIV
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLKGVVLGFACYAAYSISDAFVKLLEGTLPVYEVLFLGALLMLLAVPFLKKPDDQLRELV
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
MAKQPALWLLRALTGAIGNLTSVIAFTTLPMAEAFALIFLMPIFVTVLSVIFLKEDVHWR
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
RWSAVIVGFIGVLIVLRPGFRHLTQGHVAAIVCGLVGAISVIALRMAGHGEKRLTLYGAG
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECH
VIGPLIMGGIMMLPTFVWPTLSQWGLLAGYGLLAGLAAICMMYATRMSPVSLVAPTQYSQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCHHHH
MLWAIAFGYLLFHDHLDWPMAVGIALILGAGLFTLVREEQVSRWWRRTKIV
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA