Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is corA [H]
Identifier: 84625459
GI number: 84625459
Start: 4302367
End: 4303278
Strand: Reverse
Name: corA [H]
Synonym: XOO_3802
Alternate gene names: 84625459
Gene position: 4303278-4302367 (Counterclockwise)
Preceding gene: 84625461
Following gene: 84625457
Centisome position: 87.11
GC content: 63.05
Gene sequence:
>912_bases ATGATCACGATCCACCCGATTGCCGGAACCCGGCACACCCCAGGCTGCTGGGTCGACCTGTGCCAGCCGATCCCGCAAGA GCTGGCGCAAGCCGCTGAGAAGGTGGGGTTTGCCTTGCCCGATCGTGCGGCGATTGGCGAGATCGAATTCAGCAGCCGGG TGCGCCGCCAGGGCGATGTGTTGTTTCTCAATGTGCCGCGGTTCCAGGACGAGGATGGCCCCACGGCGCCGTTGGGGTTC GCGCTCTCACCCACCATGCTGGTGACCTTGCGTGAGCAGCGCATCGGCTCGTTGGAGGCCTTGACCGCCGGGCTGGAACA CGAGCCCTGCCACAGCGCGGACGATTTGCTGCTACGCATGTTCGACCACCTGGTCGGACGGCTGGCCGACCGGCTTGAGG CGCTCGAAGCGGCGGTCACCGAGACCACGCGGCAAGTGTTCGATAGCCCACACAAAACCAAGGATCTGGAGCGCATGTTG CACCAGGTCGGCGACATGGGCCGGCAGCTTGGCGGCTTGCACAACGCAGGGCAAGGCATGCAGCGTCTGGTCACTTATCT AGATGGCGCCGCCCCGGATTGGTTCGCTGCCGATGCAGCCAAACGCATCACCCTGCTGCACAAGGATCTGACCACCTTAA GCGAATTCCAGCAGCACATGGACGACCGCATCGAGTTCCTGCTCGACAGCGTGCTGGGCATGATCAACATGGACCAGAAC AACGTGATGAAGGTGATGGCCGTCGCGTCGGTGGTCGGTATCCCGCCCACCGTGCTGGTCGGCATCTGGGGCATGAACTT CTCTTACATGCCCGAACTCAAGGGGCACGACCACTACTTCTGGGCACTGGGCATCATCGCACTGAGCGTGGTGGTGCCGC TGGCGTGGTTTCGCAAGCGTGGATGGGTGTGA
Upstream 100 bases:
>100_bases CCATCGCGGCCGTTGCCTCCGTCGCCGATGGGCATGTGCCGGCGTTGACGCCATGGTGGACGCGGAGGATGCTGGGGCTC TTTGATCTCACAGTCGATGC
Downstream 100 bases:
>100_bases TGCATCAGTGCCCGGAACTGCAGGAGTGCTCCTGAGCGCGATATGGCGTTACCGGGAAGGCCATATCGCCCGGGTGCGTT CCTACGGCGATCAACTGCAG
Product: magnesium and cobalt transport protein
Products: Ni2; [Cytoplasm]; Co; 2 [Cytoplasm]; Mg (II) [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MITIHPIAGTRHTPGCWVDLCQPIPQELAQAAEKVGFALPDRAAIGEIEFSSRVRRQGDVLFLNVPRFQDEDGPTAPLGF ALSPTMLVTLREQRIGSLEALTAGLEHEPCHSADDLLLRMFDHLVGRLADRLEALEAAVTETTRQVFDSPHKTKDLERML HQVGDMGRQLGGLHNAGQGMQRLVTYLDGAAPDWFAADAAKRITLLHKDLTTLSEFQQHMDDRIEFLLDSVLGMINMDQN NVMKVMAVASVVGIPPTVLVGIWGMNFSYMPELKGHDHYFWALGIIALSVVVPLAWFRKRGWV
Sequences:
>Translated_303_residues MITIHPIAGTRHTPGCWVDLCQPIPQELAQAAEKVGFALPDRAAIGEIEFSSRVRRQGDVLFLNVPRFQDEDGPTAPLGF ALSPTMLVTLREQRIGSLEALTAGLEHEPCHSADDLLLRMFDHLVGRLADRLEALEAAVTETTRQVFDSPHKTKDLERML HQVGDMGRQLGGLHNAGQGMQRLVTYLDGAAPDWFAADAAKRITLLHKDLTTLSEFQQHMDDRIEFLLDSVLGMINMDQN NVMKVMAVASVVGIPPTVLVGIWGMNFSYMPELKGHDHYFWALGIIALSVVVPLAWFRKRGWV >Mature_303_residues MITIHPIAGTRHTPGCWVDLCQPIPQELAQAAEKVGFALPDRAAIGEIEFSSRVRRQGDVLFLNVPRFQDEDGPTAPLGF ALSPTMLVTLREQRIGSLEALTAGLEHEPCHSADDLLLRMFDHLVGRLADRLEALEAAVTETTRQVFDSPHKTKDLERML HQVGDMGRQLGGLHNAGQGMQRLVTYLDGAAPDWFAADAAKRITLLHKDLTTLSEFQQHMDDRIEFLLDSVLGMINMDQN NVMKVMAVASVVGIPPTVLVGIWGMNFSYMPELKGHDHYFWALGIIALSVVVPLAWFRKRGWV
Specific function: Mediates influx of magnesium ions [H]
COG id: COG0598
COG function: function code P; Mg2+ and Co2+ transporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family [H]
Homologues:
Organism=Escherichia coli, GI2367297, Length=294, Percent_Identity=24.1496598639456, Blast_Score=105, Evalue=5e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004488 - InterPro: IPR002523 [H]
Pfam domain/function: PF01544 CorA [H]
EC number: NA
Molecular weight: Translated: 33693; Mature: 33693
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITIHPIAGTRHTPGCWVDLCQPIPQELAQAAEKVGFALPDRAAIGEIEFSSRVRRQGDV CEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHCCCE LFLNVPRFQDEDGPTAPLGFALSPTMLVTLREQRIGSLEALTAGLEHEPCHSADDLLLRM EEEECCCCCCCCCCCCCCCCCCCCHHHEEEHHHHHCHHHHHHHCCCCCCCCCHHHHHHHH FDHLVGRLADRLEALEAAVTETTRQVFDSPHKTKDLERMLHQVGDMGRQLGGLHNAGQGM HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHH QRLVTYLDGAAPDWFAADAAKRITLLHKDLTTLSEFQQHMDDRIEFLLDSVLGMINMDQN HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH NVMKVMAVASVVGIPPTVLVGIWGMNFSYMPELKGHDHYFWALGIIALSVVVPLAWFRKR HHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC GWV CCC >Mature Secondary Structure MITIHPIAGTRHTPGCWVDLCQPIPQELAQAAEKVGFALPDRAAIGEIEFSSRVRRQGDV CEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHCCCE LFLNVPRFQDEDGPTAPLGFALSPTMLVTLREQRIGSLEALTAGLEHEPCHSADDLLLRM EEEECCCCCCCCCCCCCCCCCCCCHHHEEEHHHHHCHHHHHHHCCCCCCCCCHHHHHHHH FDHLVGRLADRLEALEAAVTETTRQVFDSPHKTKDLERMLHQVGDMGRQLGGLHNAGQGM HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHH QRLVTYLDGAAPDWFAADAAKRITLLHKDLTTLSEFQQHMDDRIEFLLDSVLGMINMDQN HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH NVMKVMAVASVVGIPPTVLVGIWGMNFSYMPELKGHDHYFWALGIIALSVVVPLAWFRKR HHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC GWV CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Ni2; [Periplasm]; Co; 2 [Periplasm]; Mg (II) [Periplasm] [C]
Specific reaction: Ni2+ [Periplasm] = Ni2+ [Cytoplasm] Co+2 [Periplasm] = Co+2 [Cytoplasm] Mg (II) [Periplasm] = Mg (II) [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 10688204 [H]