Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84625452
Identifier: 84625452
GI number: 84625452
Start: 4294397
End: 4295401
Strand: Reverse
Name: 84625452
Synonym: XOO_3795
Alternate gene names: NA
Gene position: 4295401-4294397 (Counterclockwise)
Preceding gene: 84625453
Following gene: 84625449
Centisome position: 86.95
GC content: 66.97
Gene sequence:
>1005_bases GTGACTACCAGCAGGAAGGAAGCGCTTGTCCCGCATGTCGCCGCTGTCGCATGCACGGGCGCCATCCTGTTTTTTCTTGC CTGCCTGTTGCTGTACATGCCGCCGCCGCGCGAAACCCCGCAACACGACGACACGTTGCAGGTGTATTTCGTGCCGCGGC CGCAAGAAACGCCTCCGGTTCCGCCGGAACCGCCGCGGCAAGCCGAGCGTAAACCGCACGCTGCCTCAACATCAGCATCG GCTGCACGTACGGCGCCGCTACCTCCGCGTACCCCGCCGTCGCCGCGGCAGGTGGCTGCTGCCACTGCGCCGCCCAGCGA CTCGATGTCGGCCCAGCTGTATACCCGCGACGGGCGCCTGCACATGGCGCAGGCCGACCCGATGGCGCAGACCGGCAGCG CGGTGCCGCCGGGCATGACCGACGAGCGCGCGCAGGCCAAGGCGCGCAACGTGATGGAGCGGGTCAACCCCGTGCAGTAC CAGGAAACCCGCTTTGCCAAGGATTGGAAGAGCGACGGCACGCTGGGCGATGTGGCGATGCAGGAAATGAATCGCGGCAT GAAGAAGTTCAACGACATGCTCAATGGACCGCAGACCCAGGTTGCCAAGGCGCGTCCGCCGCCGGACGTGCGCTTCAATC CCGCGCTGGCCGGCAATCAGGCCGAGATGGGCAGCGGGGCGACCGGCGATGCCTATAAATCTGCGCCAATCGCGCATGAA ACGCTGCCCGACCTCAAGGGCGAAGCCAGCCGTCGCATCCGCGAGGCGTTGGCTGCGCTGGAACAGCGTAGCGCGCGTTG CGATGCATCCAAGCGTACGTCGCTGTTATCGCCGGTGCGCACGCACCTGTCGGATCTGGAACGTGCCGAACACGCCTTGA ACAACGGCGCCGACCCGGTGATGGCGGCGCAGCTGCTGCCGCGTCAGGCCGACAGCGCCTACGATCTGGCCCGCCGCGCG TTGTGGTACGCCGATCGCCAGTTGAAGCAGTGCGCGCTGGGGTAA
Upstream 100 bases:
>100_bases ATTACAAACGCGCGCTCGCGCCGCGCCCGCTAGATTTGCGCCTCGCCGACGGGGTTCACCGTGTGGCATCCGCATTCTCA TCTCATCGGTCTCCCGCATT
Downstream 100 bases:
>100_bases AAGGTACGTCTGCGAAACAGTGGATCAGTTCGCAGGCCTCAGGCCAGACTCTGCCGGTACCGGTCCTTTTCGATACTCAG CGCCACTTCGGCGCGTAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 334; Mature: 333
Protein sequence:
>334_residues MTTSRKEALVPHVAAVACTGAILFFLACLLLYMPPPRETPQHDDTLQVYFVPRPQETPPVPPEPPRQAERKPHAASTSAS AARTAPLPPRTPPSPRQVAAATAPPSDSMSAQLYTRDGRLHMAQADPMAQTGSAVPPGMTDERAQAKARNVMERVNPVQY QETRFAKDWKSDGTLGDVAMQEMNRGMKKFNDMLNGPQTQVAKARPPPDVRFNPALAGNQAEMGSGATGDAYKSAPIAHE TLPDLKGEASRRIREALAALEQRSARCDASKRTSLLSPVRTHLSDLERAEHALNNGADPVMAAQLLPRQADSAYDLARRA LWYADRQLKQCALG
Sequences:
>Translated_334_residues MTTSRKEALVPHVAAVACTGAILFFLACLLLYMPPPRETPQHDDTLQVYFVPRPQETPPVPPEPPRQAERKPHAASTSAS AARTAPLPPRTPPSPRQVAAATAPPSDSMSAQLYTRDGRLHMAQADPMAQTGSAVPPGMTDERAQAKARNVMERVNPVQY QETRFAKDWKSDGTLGDVAMQEMNRGMKKFNDMLNGPQTQVAKARPPPDVRFNPALAGNQAEMGSGATGDAYKSAPIAHE TLPDLKGEASRRIREALAALEQRSARCDASKRTSLLSPVRTHLSDLERAEHALNNGADPVMAAQLLPRQADSAYDLARRA LWYADRQLKQCALG >Mature_333_residues TTSRKEALVPHVAAVACTGAILFFLACLLLYMPPPRETPQHDDTLQVYFVPRPQETPPVPPEPPRQAERKPHAASTSASA ARTAPLPPRTPPSPRQVAAATAPPSDSMSAQLYTRDGRLHMAQADPMAQTGSAVPPGMTDERAQAKARNVMERVNPVQYQ ETRFAKDWKSDGTLGDVAMQEMNRGMKKFNDMLNGPQTQVAKARPPPDVRFNPALAGNQAEMGSGATGDAYKSAPIAHET LPDLKGEASRRIREALAALEQRSARCDASKRTSLLSPVRTHLSDLERAEHALNNGADPVMAAQLLPRQADSAYDLARRAL WYADRQLKQCALG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36294; Mature: 36162
Theoretical pI: Translated: 9.39; Mature: 9.39
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTSRKEALVPHVAAVACTGAILFFLACLLLYMPPPRETPQHDDTLQVYFVPRPQETPPV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCC PPEPPRQAERKPHAASTSASAARTAPLPPRTPPSPRQVAAATAPPSDSMSAQLYTRDGRL CCCCCHHHHCCCCCCCCCCCHHCCCCCCCCCCCCHHHEEECCCCCCCCCCEEEEECCCEE HMAQADPMAQTGSAVPPGMTDERAQAKARNVMERVNPVQYQETRFAKDWKSDGTLGDVAM EECCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHH QEMNRGMKKFNDMLNGPQTQVAKARPPPDVRFNPALAGNQAEMGSGATGDAYKSAPIAHE HHHHHHHHHHHHHHCCCHHHHHCCCCCCCCEECCCCCCCCHHCCCCCCCCCHHCCCCCHH TLPDLKGEASRRIREALAALEQRSARCDASKRTSLLSPVRTHLSDLERAEHALNNGADPV HHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH MAAQLLPRQADSAYDLARRALWYADRQLKQCALG HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TTSRKEALVPHVAAVACTGAILFFLACLLLYMPPPRETPQHDDTLQVYFVPRPQETPPV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCCCCCCC PPEPPRQAERKPHAASTSASAARTAPLPPRTPPSPRQVAAATAPPSDSMSAQLYTRDGRL CCCCCHHHHCCCCCCCCCCCHHCCCCCCCCCCCCHHHEEECCCCCCCCCCEEEEECCCEE HMAQADPMAQTGSAVPPGMTDERAQAKARNVMERVNPVQYQETRFAKDWKSDGTLGDVAM EECCCCCHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHH QEMNRGMKKFNDMLNGPQTQVAKARPPPDVRFNPALAGNQAEMGSGATGDAYKSAPIAHE HHHHHHHHHHHHHHCCCHHHHHCCCCCCCCEECCCCCCCCHHCCCCCCCCCHHCCCCCHH TLPDLKGEASRRIREALAALEQRSARCDASKRTSLLSPVRTHLSDLERAEHALNNGADPV HHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH MAAQLLPRQADSAYDLARRALWYADRQLKQCALG HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA