Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84625444
Identifier: 84625444
GI number: 84625444
Start: 4282049
End: 4282498
Strand: Reverse
Name: 84625444
Synonym: XOO_3787
Alternate gene names: NA
Gene position: 4282498-4282049 (Counterclockwise)
Preceding gene: 84625445
Following gene: 84625443
Centisome position: 86.69
GC content: 66.89
Gene sequence:
>450_bases ATGACCAATGCACCGTTGCTGGAACGGATGGTGGACCTGACCGCCATCCGCGATGCCGATCTGCTCGACCTGAGCCTGTT GCGCACCGTGCGTGAGGTCTGCGCTGCCGAAGAACTCTCGCTGCTGCGCATTGCCCCGGACGGCCGCAGCATGGCCGAAA CGCGCCTGCGCGACGATGGTCGGCTGTCGCTGACGATGGCCGAGATCCGCGATGCGCAGACGCGTGCACGGCTGGCCGAG GTGCACAGGCCGGGCGCTGTCGTGCAGTTGCAGGAAGACGGCCGCGCCTTGCTGGTCTACCCAATGATGGAAGCGCGCGG ATCCGCACCTGCCTGCGGGTGGGCGGCGCACGCATACCCGGCAGTGCAGCGCAGGCGATGCTGCGCGGTTTTGCGCGCTT TTTACAGAATTACCGCAGCCTGCTCGACGACGCCCAGCGCGATGCACTGA
Upstream 100 bases:
>100_bases CGGTGGTTGCCGTGAAGCCGGTGCGTTCCAGCCCGAGATTGTGCGCCTGGGTGCCGTGCTCGGCGCTGCGGGCGTGTGCC TGTTCACGGGGGGCGCGGCC
Downstream 100 bases:
>100_bases CCTGCCTGCGCAACCGCAAAACGTTCGACGATGTGATCCTGCGGCTGTTTGCGGGCGATGCCGAATCCAGCGCGGAACAG GGCGTGTGGCTGGGCATCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MTNAPLLERMVDLTAIRDADLLDLSLLRTVREVCAAEELSLLRIAPDGRSMAETRLRDDGRLSLTMAEIRDAQTRARLAE VHRPGAVVQLQEDGRALLVYPMMEARGSAPACGWAAHAYPAVQRRRCCAVLRAFYRITAACSTTPSAMH
Sequences:
>Translated_149_residues MTNAPLLERMVDLTAIRDADLLDLSLLRTVREVCAAEELSLLRIAPDGRSMAETRLRDDGRLSLTMAEIRDAQTRARLAE VHRPGAVVQLQEDGRALLVYPMMEARGSAPACGWAAHAYPAVQRRRCCAVLRAFYRITAACSTTPSAMH >Mature_148_residues TNAPLLERMVDLTAIRDADLLDLSLLRTVREVCAAEELSLLRIAPDGRSMAETRLRDDGRLSLTMAEIRDAQTRARLAEV HRPGAVVQLQEDGRALLVYPMMEARGSAPACGWAAHAYPAVQRRRCCAVLRAFYRITAACSTTPSAMH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16448; Mature: 16317
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 8.1 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 7.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNAPLLERMVDLTAIRDADLLDLSLLRTVREVCAAEELSLLRIAPDGRSMAETRLRDDG CCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHCCCCC RLSLTMAEIRDAQTRARLAEVHRPGAVVQLQEDGRALLVYPMMEARGSAPACGWAAHAYP CEEEEHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEEHHCCCCCCCCCCHHHHHH AVQRRRCCAVLRAFYRITAACSTTPSAMH HHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure TNAPLLERMVDLTAIRDADLLDLSLLRTVREVCAAEELSLLRIAPDGRSMAETRLRDDG CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHCCCCC RLSLTMAEIRDAQTRARLAEVHRPGAVVQLQEDGRALLVYPMMEARGSAPACGWAAHAYP CEEEEHHHHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEEEHHCCCCCCCCCCHHHHHH AVQRRRCCAVLRAFYRITAACSTTPSAMH HHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA