Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84625429
Identifier: 84625429
GI number: 84625429
Start: 4265443
End: 4265874
Strand: Reverse
Name: 84625429
Synonym: XOO_3772
Alternate gene names: NA
Gene position: 4265874-4265443 (Counterclockwise)
Preceding gene: 84625430
Following gene: 84625427
Centisome position: 86.35
GC content: 63.43
Gene sequence:
>432_bases ATGTCCCCGCCGGCCCAAATCGCTGCTCTGGAAAACGGATGCGATGTTCATCGCTGGCGATCGTATTGGCCGTTCGCACT GTCCATGGCAATGCGTGCGCTGGCCGCGCGCGCCGCGGCCTATCTGACCCATGACTCTGCGCACAGCGTGACTGCGTGGT GCCTGGGATGGATGGCGCGTCCGTTTGGCATCGATTATGGAGCGGCGATCCTGGGCGACGTGTTGCTGCTAGGGGACGTG TCGGACAATGTCGACTCTGCGCCGATTTTTTCGAGCGGACACGGCTGGGCCGATGCGGCCATCGCATTGGCTGGGCCGTT CCTGGGCAATGGCGCGATGTATGGCGTGGCTGCCTGGGTGGCACGCTGGCGGGTCGTGCGTCGATCGCGAGGCTTGCTCG GTTTCTGTCTCTCTTATGCGCTTATGCGCTGA
Upstream 100 bases:
>100_bases GAGCGGCTGGCCGACTGAGTGAGAGATCGGCGCGCCGGGCAAGGATATCCGGCGCGATGACTGCACTTGCCGAAGTTGCT TTCCGGCGCAAGTGATCGCC
Downstream 100 bases:
>100_bases CGTGCGCGCCGTCCGCGCCCACCTGACAGCTGCTCGCTACGTTGTGTTAGCCGCTCTAAGAGCCAGCTCGCGTGGGCAAT GCTCGGTCACCTCGCGATCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MSPPAQIAALENGCDVHRWRSYWPFALSMAMRALAARAAAYLTHDSAHSVTAWCLGWMARPFGIDYGAAILGDVLLLGDV SDNVDSAPIFSSGHGWADAAIALAGPFLGNGAMYGVAAWVARWRVVRRSRGLLGFCLSYALMR
Sequences:
>Translated_143_residues MSPPAQIAALENGCDVHRWRSYWPFALSMAMRALAARAAAYLTHDSAHSVTAWCLGWMARPFGIDYGAAILGDVLLLGDV SDNVDSAPIFSSGHGWADAAIALAGPFLGNGAMYGVAAWVARWRVVRRSRGLLGFCLSYALMR >Mature_142_residues SPPAQIAALENGCDVHRWRSYWPFALSMAMRALAARAAAYLTHDSAHSVTAWCLGWMARPFGIDYGAAILGDVLLLGDVS DNVDSAPIFSSGHGWADAAIALAGPFLGNGAMYGVAAWVARWRVVRRSRGLLGFCLSYALMR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15373; Mature: 15242
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPPAQIAALENGCDVHRWRSYWPFALSMAMRALAARAAAYLTHDSAHSVTAWCLGWMAR CCCCHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH PFGIDYGAAILGDVLLLGDVSDNVDSAPIFSSGHGWADAAIALAGPFLGNGAMYGVAAWV HCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHH ARWRVVRRSRGLLGFCLSYALMR HHHHHHHHHCCHHHHHHHHHHCC >Mature Secondary Structure SPPAQIAALENGCDVHRWRSYWPFALSMAMRALAARAAAYLTHDSAHSVTAWCLGWMAR CCCHHHHHHCCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH PFGIDYGAAILGDVLLLGDVSDNVDSAPIFSSGHGWADAAIALAGPFLGNGAMYGVAAWV HCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHH ARWRVVRRSRGLLGFCLSYALMR HHHHHHHHHCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA