Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

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The map label for this gene is 84625423

Identifier: 84625423

GI number: 84625423

Start: 4259097

End: 4259768

Strand: Reverse

Name: 84625423

Synonym: XOO_3766

Alternate gene names: NA

Gene position: 4259768-4259097 (Counterclockwise)

Preceding gene: 84625424

Following gene: 84625422

Centisome position: 86.23

GC content: 64.43

Gene sequence:

>672_bases
ATGAGCGAGAACACGGACAAATTCGGCGCACATGAAGTCGCCACCTGGCTGCGACGTCACCCGACCTTCCTCAAGCAGTT
CCCGGATCTGGCAGTGAGCTTGCTGGTGCCGCGCGACGACGGCCCCACCGCTTCGTTGGCGACCTACCAACTCGAAGTGC
TGCGCGACAAGAATCGCGAACTGTCGCGGCGCTTGCAGGAGCTGGGCAGCAATGCGCAGGAGAACGAGCGGCTGGCGGTG
CGCACGCATCAACTCACGCTGGCACTGATGCGCCAGACCAGCGCGGCCGACACGCTCAAGGCGATGGCCGCTTCGCTGGC
GGAAGATTTCAACGGCGAACTGGTGCGGCTGGTGCTGCTCAAGCCGGTCGACGCGCTGGACGCCGACTGGCTGCAGATCA
TCGCAACCGATGATGCACGGCTTGCCCCGTTTAGCGATTGCCTGAGCGATGGCGAGCCCATCTGCGGCCGCTTGCAAGCC
GACAAGCACGCGTTGCTCTACGGAGCACAGGCGGGCGAAGTGCAATCCACTGCGCTGTTGCCGCTGCCGGGCATTGGCCT
GATCGCGGTGGGAAGCAGCGACGCCAACCGGTTCTATCCCGGCATGGGCACGCTGTTCCTGCGCATGATGGGCGAATCGC
TGAGCGTGGCATTGCACCGCTTCGACGTGTGA

Upstream 100 bases:

>100_bases
CCTTGCCGGGTGGCGAGCTACGCATTCGTTGGCCCTGTGACCACGAGCAAGTGGTCATGTCCGGCCCGGCGGTGTTCGTC
TTCGATGGAGAGTGGAACGG

Downstream 100 bases:

>100_bases
TGCCGACTGTTGCATGCCTTCAGGTTGACGACACGCTGCCGATGGTGGCGTTGCTGCGACGGCGAGGACTGAGGTGGTGG
CTGTCGAAGAATTTCTGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 223; Mature: 222

Protein sequence:

>223_residues
MSENTDKFGAHEVATWLRRHPTFLKQFPDLAVSLLVPRDDGPTASLATYQLEVLRDKNRELSRRLQELGSNAQENERLAV
RTHQLTLALMRQTSAADTLKAMAASLAEDFNGELVRLVLLKPVDALDADWLQIIATDDARLAPFSDCLSDGEPICGRLQA
DKHALLYGAQAGEVQSTALLPLPGIGLIAVGSSDANRFYPGMGTLFLRMMGESLSVALHRFDV

Sequences:

>Translated_223_residues
MSENTDKFGAHEVATWLRRHPTFLKQFPDLAVSLLVPRDDGPTASLATYQLEVLRDKNRELSRRLQELGSNAQENERLAV
RTHQLTLALMRQTSAADTLKAMAASLAEDFNGELVRLVLLKPVDALDADWLQIIATDDARLAPFSDCLSDGEPICGRLQA
DKHALLYGAQAGEVQSTALLPLPGIGLIAVGSSDANRFYPGMGTLFLRMMGESLSVALHRFDV
>Mature_222_residues
SENTDKFGAHEVATWLRRHPTFLKQFPDLAVSLLVPRDDGPTASLATYQLEVLRDKNRELSRRLQELGSNAQENERLAVR
THQLTLALMRQTSAADTLKAMAASLAEDFNGELVRLVLLKPVDALDADWLQIIATDDARLAPFSDCLSDGEPICGRLQAD
KHALLYGAQAGEVQSTALLPLPGIGLIAVGSSDANRFYPGMGTLFLRMMGESLSVALHRFDV

Specific function: Unknown

COG id: COG3159

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24427; Mature: 24296

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSENTDKFGAHEVATWLRRHPTFLKQFPDLAVSLLVPRDDGPTASLATYQLEVLRDKNRE
CCCCCCCCCHHHHHHHHHHCCHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHCCCHH
LSRRLQELGSNAQENERLAVRTHQLTLALMRQTSAADTLKAMAASLAEDFNGELVRLVLL
HHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEE
KPVDALDADWLQIIATDDARLAPFSDCLSDGEPICGRLQADKHALLYGAQAGEVQSTALL
CCCCCCCCCCEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEC
PLPGIGLIAVGSSDANRFYPGMGTLFLRMMGESLSVALHRFDV
CCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SENTDKFGAHEVATWLRRHPTFLKQFPDLAVSLLVPRDDGPTASLATYQLEVLRDKNRE
CCCCCCCCHHHHHHHHHHCCHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHCCCHH
LSRRLQELGSNAQENERLAVRTHQLTLALMRQTSAADTLKAMAASLAEDFNGELVRLVLL
HHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEE
KPVDALDADWLQIIATDDARLAPFSDCLSDGEPICGRLQADKHALLYGAQAGEVQSTALL
CCCCCCCCCCEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEC
PLPGIGLIAVGSSDANRFYPGMGTLFLRMMGESLSVALHRFDV
CCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA