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The map label for this gene is hslV [H]

Identifier: 84625421

GI number: 84625421

Start: 4256913

End: 4257464

Strand: Reverse

Name: hslV [H]

Synonym: XOO_3764

Alternate gene names: 84625421

Gene position: 4257464-4256913 (Counterclockwise)

Preceding gene: 84625422

Following gene: 84625420

Centisome position: 86.18

GC content: 63.04

Gene sequence:

>552_bases
ATGGACCCTAGCCAGAACCCCAACATCGTTCACGCCACCACCATCATTTCGGTTCGACGTGGTGGGCATGTCGCCGTCGC
TGGCGATGGCCAGGTTACCCTTGGCCATACGGTCATGAAGGGCAATGCGCGCAAGGTGCGCCGGCTCGGGCGCGAGGGTC
AGGTGCTGGCCGGTTTCGCCGGCGCTGCCGCCGATGCGTTTACCTTGTTCGAGTTGTTCGAAGCCAAGCTCGACAAACAC
GGCCAGTTGACTCGCGCCGCGGTGGAGCTGGCCAAGGATTGGCGCACCGAGCGCCGCCTGGGCAAGCTCGAAGCGCTGCT
GGCCGTGGCCGATAAGGAGACCTCGCTGATCATCAGCGGTACCGGCGATGTGATCGAACCGGAAGACGGCATCATCGCCA
TTGGTTCTGGCGGCGCGTACGCCTTGTCGGCCGCGCGTGCGCTGCTGGCGCACACCGAGCTGGATGCCAAGACCATTGCC
ACCGAAGCGATCAATATCGCCGGCGATATCTGCATCTATACCAATCGCAACGTGGTGGTCGAAGAGCTGTGA

Upstream 100 bases:

>100_bases
TCGCAAGTGAGCGCGGCAGCAGCGGCCTGCGGCGCTTCGCCGCAGCGCGCTTGAACCCGGAAGGGGCGTCCCCACCTCCT
TGGAAACACCCGGAGGATCC

Downstream 100 bases:

>100_bases
ATCGGGAGTGGGGAATCGGCAATCGGCAATCGCAACAGCGGTTTCGTCCCCATGTCCTCGACCCATGCTCTTGCCATTTC
CCTTTCCCTTTCCCAATTCT

Product: ATP-dependent protease peptidase subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MDPSQNPNIVHATTIISVRRGGHVAVAGDGQVTLGHTVMKGNARKVRRLGREGQVLAGFAGAAADAFTLFELFEAKLDKH
GQLTRAAVELAKDWRTERRLGKLEALLAVADKETSLIISGTGDVIEPEDGIIAIGSGGAYALSAARALLAHTELDAKTIA
TEAINIAGDICIYTNRNVVVEEL

Sequences:

>Translated_183_residues
MDPSQNPNIVHATTIISVRRGGHVAVAGDGQVTLGHTVMKGNARKVRRLGREGQVLAGFAGAAADAFTLFELFEAKLDKH
GQLTRAAVELAKDWRTERRLGKLEALLAVADKETSLIISGTGDVIEPEDGIIAIGSGGAYALSAARALLAHTELDAKTIA
TEAINIAGDICIYTNRNVVVEEL
>Mature_183_residues
MDPSQNPNIVHATTIISVRRGGHVAVAGDGQVTLGHTVMKGNARKVRRLGREGQVLAGFAGAAADAFTLFELFEAKLDKH
GQLTRAAVELAKDWRTERRLGKLEALLAVADKETSLIISGTGDVIEPEDGIIAIGSGGAYALSAARALLAHTELDAKTIA
TEAINIAGDICIYTNRNVVVEEL

Specific function: Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery [H]

COG id: COG5405

COG function: function code O; ATP-dependent protease HslVU (ClpYQ), peptidase subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase T1B family. HslV subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790367, Length=172, Percent_Identity=69.1860465116279, Blast_Score=232, Evalue=1e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022281
- InterPro:   IPR001353 [H]

Pfam domain/function: PF00227 Proteasome [H]

EC number: 3.4.25.- [C]

Molecular weight: Translated: 19308; Mature: 19308

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPSQNPNIVHATTIISVRRGGHVAVAGDGQVTLGHTVMKGNARKVRRLGREGQVLAGFA
CCCCCCCCEEEEEEEEEEECCCEEEEECCCEEEECEEEECCCHHHHHHCCCCCCEEEEEC
GAAADAFTLFELFEAKLDKHGQLTRAAVELAKDWRTERRLGKLEALLAVADKETSLIISG
CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC
TGDVIEPEDGIIAIGSGGAYALSAARALLAHTELDAKTIATEAINIAGDICIYTNRNVVV
CCCEECCCCCEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEECCCEEE
EEL
EEC
>Mature Secondary Structure
MDPSQNPNIVHATTIISVRRGGHVAVAGDGQVTLGHTVMKGNARKVRRLGREGQVLAGFA
CCCCCCCCEEEEEEEEEEECCCEEEEECCCEEEECEEEECCCHHHHHHCCCCCCEEEEEC
GAAADAFTLFELFEAKLDKHGQLTRAAVELAKDWRTERRLGKLEALLAVADKETSLIISG
CHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEC
TGDVIEPEDGIIAIGSGGAYALSAARALLAHTELDAKTIATEAINIAGDICIYTNRNVVV
CCCEECCCCCEEEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCEEEEECCCEEE
EEL
EEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Endopeptidases of unknown catalytic mechanism [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA