Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84625414
Identifier: 84625414
GI number: 84625414
Start: 4249118
End: 4249402
Strand: Reverse
Name: 84625414
Synonym: XOO_3757
Alternate gene names: NA
Gene position: 4249402-4249118 (Counterclockwise)
Preceding gene: 84625420
Following gene: 84625413
Centisome position: 86.02
GC content: 67.02
Gene sequence:
>285_bases GTGCGCGACAAGTACGTCCAGCGCGACTGGCAGCCCCACGAGAAGCCCACCCTCCCGGGGTCTGCCTCCACTCCGCTGCA CACCACCCGGCGGCGTATTCAGTACGGGCTGGTGGGCGTAGGCGTGGCGCTCACCGGCGGGCTCAGCAACGCGCTGGTCA CCGCCAACCTGACCTATCTGCAAGGCACGCTGGGCGCCTACGCCACCGAAATGGCCTGGCTGCCGGCCGCCTATGTGATG ACCTCCATGTCGGCCAACCTGTTGCTGGTGAAGTTTCGCCAGTAG
Upstream 100 bases:
>100_bases GGGGATTCGCTCATGGATGGAGTATCGCACTGCTGACGCCGCCATGACCGCAACCGGACCACAATCGCCTGTCATCTGCG ACCGGCCCTGCGAGCATTCA
Downstream 100 bases:
>100_bases TTCGGGCTGCGCCGCTTCACCGAAATCTTCCTGGCGCTGTACGCGCTCATTGCCTTTGCGCACCTGTTCGTGCATAGCCT GAGCTCGGCGATTACCGTGC
Product: hypothetical protein
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Transporter Facilitator Family; Facilitator Superfamily Transporter; Multidrug Resistance Protein B; Transmembrane Efflux Pump Protein; Facilitator Superfamily Transporter Protein; MFS Family Transporter; HlyD Family Protein; Facilitator Family Transporter; Facilitator Superfamily Permease
Number of amino acids: Translated: 94; Mature: 94
Protein sequence:
>94_residues MRDKYVQRDWQPHEKPTLPGSASTPLHTTRRRIQYGLVGVGVALTGGLSNALVTANLTYLQGTLGAYATEMAWLPAAYVM TSMSANLLLVKFRQ
Sequences:
>Translated_94_residues MRDKYVQRDWQPHEKPTLPGSASTPLHTTRRRIQYGLVGVGVALTGGLSNALVTANLTYLQGTLGAYATEMAWLPAAYVM TSMSANLLLVKFRQ >Mature_94_residues MRDKYVQRDWQPHEKPTLPGSASTPLHTTRRRIQYGLVGVGVALTGGLSNALVTANLTYLQGTLGAYATEMAWLPAAYVM TSMSANLLLVKFRQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10323; Mature: 10323
Theoretical pI: Translated: 10.35; Mature: 10.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDKYVQRDWQPHEKPTLPGSASTPLHTTRRRIQYGLVGVGVALTGGLSNALVTANLTYL CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEEEECCCCCEEEEEEHHHH QGTLGAYATEMAWLPAAYVMTSMSANLLLVKFRQ HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECC >Mature Secondary Structure MRDKYVQRDWQPHEKPTLPGSASTPLHTTRRRIQYGLVGVGVALTGGLSNALVTANLTYL CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCEEEEEEEECCCCCEEEEEEHHHH QGTLGAYATEMAWLPAAYVMTSMSANLLLVKFRQ HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA