Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is mltB [H]
Identifier: 84625393
GI number: 84625393
Start: 4224055
End: 4225194
Strand: Reverse
Name: mltB [H]
Synonym: XOO_3736
Alternate gene names: 84625393
Gene position: 4225194-4224055 (Counterclockwise)
Preceding gene: 84625394
Following gene: 84625392
Centisome position: 85.53
GC content: 65.44
Gene sequence:
>1140_bases ATGATTCGACGCACTCTGACCTGCCTGCTCACCCTCGGCCTTGTCGCCTGCGCGACCCAGCCCAGCCCTCCGTCCCCGCC ACCGGCCGCCAGCGCGCCGCCGGCCAAGCCAACGGTTGCGCCAGCCGCGCCCGCCAGTGCCGCTGCTGAAGCCCCCGCGC TTCCGCCGGTCGACCTGACCCCGGTGCCGTTCGAGATCGCCCGCGCCAACTTCGTGCGCGACACCGCCGCCAAGTACGGT ATCGATGCCGCGCAGATCGAGGCGGTGCTGGCGCAGGCGCAGTTCAAGGACGCGATCGTCACTGCCATGTCGCGCCCGGC CGAACGGGTCAAGCCGTGGAACGAATACCGGCCGATGTTCATCACCCAGGCGCGCATCGACGGCGGCCGCAAGTTTCTCG CCGAACACCGCGCCGAGCTGAGCAAGGTGCAAGCGGACACCGGTGTACCGGCACAGATCATCGTCGCCATCATCGGGGTG GAAACCAGCTACGGCAGCAACGCCGGCAAATATCGCGTGCTGGATGCGCTGTACACGCTGGCGTTTCGTTACCCGCGCAG TGGCGACCCAGCCAAGCTCGAACGCGAAGTGCGCCGCGAACTGTTTTTCCGCGATGAACTCGCCCAGTTGTTCGCGCTGG GCAAGGAAGAGCAACTCGACGTCACCAGCTTGATCGGCAGCTATGCCGGCGCGATGGGCATGGGGCAATTCATGCCGTCC AGCTATCGCCAGTTCGGTGTCGACGGCGATGCCGACGGCAAGCGCAATCTGTTCACCGACTACAACGACATGTTCGCCTC GATCGCCAATTACTTTGTCAAGAAGGGCGGCTGGGTGCGCGACGGACAGGTCGCGGTACCGGCCACGCTGGCTGCCGGCC ATGAAGAATTCAATCCTGCCGATTGGTCGCCGGTGTACACGCTGGCCGACTTGTCGGCGCGCGGGTATCACCCGAGCGCA CCGGTGGTCGCGGGCAGCGCCGCCACCCCGATCAGCCTGGACGACGCCAACGGCAAGCAGTACTGGCTGGGCTTCCAGAA CTTCTACGCACTCACCCGTTACAACATTTCCAAGATGTACGCGATGGCCGTGTTCCAGCTATCCGAGGCCATCGCCGGCA AGGAGTTACCCCCGGCATGA
Upstream 100 bases:
>100_bases ATCCCCTGCCGCAAACGCGGCAGGCTTGACTTTGACTAAAGTCTTTGCGTTTCATGGTCTTATTGCCAGAAGTTCATCTG ATGTCTGTTACCCTTGACCG
Downstream 100 bases:
>100_bases ACAGCATTGCAGGCCCCAAGTGGCTGATTCCGATGGCACTGATGCTCAGCCTTGCGGCCTGCAGCAGCGCACCGAAGAAG ACCGCCGGTAGCAACGGCAG
Product: membrane-bound lytic transglycosylase
Products: Muramic Acid Residue [C]
Alternate protein names: 35 kDa soluble lytic transglycosylase; Murein hydrolase B; Slt35 [H]
Number of amino acids: Translated: 379; Mature: 379
Protein sequence:
>379_residues MIRRTLTCLLTLGLVACATQPSPPSPPPAASAPPAKPTVAPAAPASAAAEAPALPPVDLTPVPFEIARANFVRDTAAKYG IDAAQIEAVLAQAQFKDAIVTAMSRPAERVKPWNEYRPMFITQARIDGGRKFLAEHRAELSKVQADTGVPAQIIVAIIGV ETSYGSNAGKYRVLDALYTLAFRYPRSGDPAKLEREVRRELFFRDELAQLFALGKEEQLDVTSLIGSYAGAMGMGQFMPS SYRQFGVDGDADGKRNLFTDYNDMFASIANYFVKKGGWVRDGQVAVPATLAAGHEEFNPADWSPVYTLADLSARGYHPSA PVVAGSAATPISLDDANGKQYWLGFQNFYALTRYNISKMYAMAVFQLSEAIAGKELPPA
Sequences:
>Translated_379_residues MIRRTLTCLLTLGLVACATQPSPPSPPPAASAPPAKPTVAPAAPASAAAEAPALPPVDLTPVPFEIARANFVRDTAAKYG IDAAQIEAVLAQAQFKDAIVTAMSRPAERVKPWNEYRPMFITQARIDGGRKFLAEHRAELSKVQADTGVPAQIIVAIIGV ETSYGSNAGKYRVLDALYTLAFRYPRSGDPAKLEREVRRELFFRDELAQLFALGKEEQLDVTSLIGSYAGAMGMGQFMPS SYRQFGVDGDADGKRNLFTDYNDMFASIANYFVKKGGWVRDGQVAVPATLAAGHEEFNPADWSPVYTLADLSARGYHPSA PVVAGSAATPISLDDANGKQYWLGFQNFYALTRYNISKMYAMAVFQLSEAIAGKELPPA >Mature_379_residues MIRRTLTCLLTLGLVACATQPSPPSPPPAASAPPAKPTVAPAAPASAAAEAPALPPVDLTPVPFEIARANFVRDTAAKYG IDAAQIEAVLAQAQFKDAIVTAMSRPAERVKPWNEYRPMFITQARIDGGRKFLAEHRAELSKVQADTGVPAQIIVAIIGV ETSYGSNAGKYRVLDALYTLAFRYPRSGDPAKLEREVRRELFFRDELAQLFALGKEEQLDVTSLIGSYAGAMGMGQFMPS SYRQFGVDGDADGKRNLFTDYNDMFASIANYFVKKGGWVRDGQVAVPATLAAGHEEFNPADWSPVYTLADLSARGYHPSA PVVAGSAATPISLDDANGKQYWLGFQNFYALTRYNISKMYAMAVFQLSEAIAGKELPPA
Specific function: Murein-degrading enzyme. Catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N- acetylglucosamine residues in peptidoglycan. May play a role in recycling of muropeptides during cell elongation and/or cell division [H]
COG id: COG2951
COG function: function code M; Membrane-bound lytic murein transglycosylase B
Gene ontology:
Cell location: Cell outer membrane; Lipid-anchor; Periplasmic side [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789053, Length=380, Percent_Identity=37.3684210526316, Blast_Score=219, Evalue=2e-58,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011757 [H]
Pfam domain/function: NA
EC number: 3.2.1.- [C]
Molecular weight: Translated: 40890; Mature: 40890
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRRTLTCLLTLGLVACATQPSPPSPPPAASAPPAKPTVAPAAPASAAAEAPALPPVDLT CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCC PVPFEIARANFVRDTAAKYGIDAAQIEAVLAQAQFKDAIVTAMSRPAERVKPWNEYRPMF CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHCCCEE ITQARIDGGRKFLAEHRAELSKVQADTGVPAQIIVAIIGVETSYGSNAGKYRVLDALYTL EEEEHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH AFRYPRSGDPAKLEREVRRELFFRDELAQLFALGKEEQLDVTSLIGSYAGAMGMGQFMPS HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCH SYRQFGVDGDADGKRNLFTDYNDMFASIANYFVKKGGWVRDGQVAVPATLAAGHEEFNPA HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEECCHHHHCCCCCCCCC DWSPVYTLADLSARGYHPSAPVVAGSAATPISLDDANGKQYWLGFQNFYALTRYNISKMY CCCCCEEEHHCCCCCCCCCCCEEECCCCCCEEEECCCCCEEEEEHHHHHHHHHHHHHHHH AMAVFQLSEAIAGKELPPA HHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MIRRTLTCLLTLGLVACATQPSPPSPPPAASAPPAKPTVAPAAPASAAAEAPALPPVDLT CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCC PVPFEIARANFVRDTAAKYGIDAAQIEAVLAQAQFKDAIVTAMSRPAERVKPWNEYRPMF CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCHHCCCEE ITQARIDGGRKFLAEHRAELSKVQADTGVPAQIIVAIIGVETSYGSNAGKYRVLDALYTL EEEEHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH AFRYPRSGDPAKLEREVRRELFFRDELAQLFALGKEEQLDVTSLIGSYAGAMGMGQFMPS HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCH SYRQFGVDGDADGKRNLFTDYNDMFASIANYFVKKGGWVRDGQVAVPATLAAGHEEFNPA HHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCEECCHHHHCCCCCCCCC DWSPVYTLADLSARGYHPSAPVVAGSAATPISLDDANGKQYWLGFQNFYALTRYNISKMY CCCCCEEEHHCCCCCCCCCCCEEECCCCCCEEEECCCCCEEEEEHHHHHHHHHHHHHHHH AMAVFQLSEAIAGKELPPA HHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Muramic Acid Residue (N-Acetylmuramic Acid And N-Acetylglucosamine Residues) [C]
Specific reaction: Cleavage Of The Beta-1,4-Glycosidic Bond [C]
General reaction: Cleavage Bond [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7476170; 7789526; 9205837; 9278503; 3553176; 9761817; 10570954; 10545329; 10684641 [H]