Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84625377
Identifier: 84625377
GI number: 84625377
Start: 4205140
End: 4205937
Strand: Reverse
Name: 84625377
Synonym: XOO_3720
Alternate gene names: NA
Gene position: 4205937-4205140 (Counterclockwise)
Preceding gene: 84625378
Following gene: 84625376
Centisome position: 85.14
GC content: 65.91
Gene sequence:
>798_bases ATGCTCTGTGCCGGTTTTGGATGCCGGAATCTCCCTATGTCTTGTTCTTCCCTGATCGCGCGCGGCGCACTGCTTGGCGC GCTGGCAACTCTGGCTGGCTGCGGTGGCAGCAAGGGCGACACGATGTTGATGCGCGAGTCGTTCAATTCCGATGACACCT ATTCGCGCAGCGTGGCGGCCAGTTCGCCGCAAGCCTGCGAGGCGGCGCGGCGTGTGCTGTTGAGTCAGGGCTACGCCGTG ACGCGCGCAGATGCCGTCGCGGTGGAAGGCAGCAAGAACTTCCAGCTCGAGGAGGTCGACCAGAGCGAGCAACTCAATCT GCGCATTTCCTGCGCCACCCAGGACGGCGGCAAGGCGCAGGTCTTCGTGAGCGCGCTGCAGGACCGTTACGCGCTGAAGA AGAGTTCTACCACGGCCAGCGTGGGCGTTGGCGTGCTGGGCTCGTTGTCGTTGCCGGTCGGTAGCAGTGGCGATTCGCTT GTGCGCGTGTCCAGCACCACGGTGCAGGATGCGGCGTTCTACAAGCGCTTCTTCGAACGTTTGAACGCGTATCTGCCCAA GGTCACCGAAGCGGTGCCTGCTACCGCAAGTGCAGCGCCCGCGCCCGCACATGCGGCCGCACCAGCAGCTGCAGCCACGC CTGCAGCGAACACTCAAACGCCCGCGTCACCTGCGCCCGCCGCAGCGAACCCCGCGACGGTTGCGCATCCGCCGGTTGCG CCATTGCCTGTCCAAGCGCAGGACCCACCGCCAGCACCGGCGAAGGTGCCGCAAACCGAGCCCGCCACGCAGCCGTGA
Upstream 100 bases:
>100_bases CCGATGGCCGCCGTCTGCAGGTGGACCTGCAATTGCCAGCGGATGAACCGCCGTTGCCATGACCCGGCAACGCGACGCTG CGCGCACATGGGTTGCCGCT
Downstream 100 bases:
>100_bases TGGTGTTTTCACGCTCTGCTCCAAAGCCTGAATAGCCAGGTGCGCGCTTCACGTTGTGTTCTCGACTGTGTGGCCAGAGT GCGCCCATGACTCGCCGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein Transmembrane; Lipoprotein Protein; Large Tegument Domain-Containing Protein
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MLCAGFGCRNLPMSCSSLIARGALLGALATLAGCGGSKGDTMLMRESFNSDDTYSRSVAASSPQACEAARRVLLSQGYAV TRADAVAVEGSKNFQLEEVDQSEQLNLRISCATQDGGKAQVFVSALQDRYALKKSSTTASVGVGVLGSLSLPVGSSGDSL VRVSSTTVQDAAFYKRFFERLNAYLPKVTEAVPATASAAPAPAHAAAPAAAATPAANTQTPASPAPAAANPATVAHPPVA PLPVQAQDPPPAPAKVPQTEPATQP
Sequences:
>Translated_265_residues MLCAGFGCRNLPMSCSSLIARGALLGALATLAGCGGSKGDTMLMRESFNSDDTYSRSVAASSPQACEAARRVLLSQGYAV TRADAVAVEGSKNFQLEEVDQSEQLNLRISCATQDGGKAQVFVSALQDRYALKKSSTTASVGVGVLGSLSLPVGSSGDSL VRVSSTTVQDAAFYKRFFERLNAYLPKVTEAVPATASAAPAPAHAAAPAAAATPAANTQTPASPAPAAANPATVAHPPVA PLPVQAQDPPPAPAKVPQTEPATQP >Mature_265_residues MLCAGFGCRNLPMSCSSLIARGALLGALATLAGCGGSKGDTMLMRESFNSDDTYSRSVAASSPQACEAARRVLLSQGYAV TRADAVAVEGSKNFQLEEVDQSEQLNLRISCATQDGGKAQVFVSALQDRYALKKSSTTASVGVGVLGSLSLPVGSSGDSL VRVSSTTVQDAAFYKRFFERLNAYLPKVTEAVPATASAAPAPAHAAAPAAAATPAANTQTPASPAPAAANPATVAHPPVA PLPVQAQDPPPAPAKVPQTEPATQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26880; Mature: 26880
Theoretical pI: Translated: 7.77; Mature: 7.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLCAGFGCRNLPMSCSSLIARGALLGALATLAGCGGSKGDTMLMRESFNSDDTYSRSVAA CEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHCC SSPQACEAARRVLLSQGYAVTRADAVAVEGSKNFQLEEVDQSEQLNLRISCATQDGGKAQ CCCHHHHHHHHHHHHCCCEEEECCEEEEECCCCCCHHCCCCCCCEEEEEEEECCCCCCHH VFVSALQDRYALKKSSTTASVGVGVLGSLSLPVGSSGDSLVRVSSTTVQDAAFYKRFFER HHHHHHHHHHHHHCCCCCHHHHHHHHEEECCCCCCCCCCEEEEECCHHHHHHHHHHHHHH LNAYLPKVTEAVPATASAAPAPAHAAAPAAAATPAANTQTPASPAPAAANPATVAHPPVA HHHHHHHHHHHCCCCCCCCCCCCHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PLPVQAQDPPPAPAKVPQTEPATQP CCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MLCAGFGCRNLPMSCSSLIARGALLGALATLAGCGGSKGDTMLMRESFNSDDTYSRSVAA CEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHCC SSPQACEAARRVLLSQGYAVTRADAVAVEGSKNFQLEEVDQSEQLNLRISCATQDGGKAQ CCCHHHHHHHHHHHHCCCEEEECCEEEEECCCCCCHHCCCCCCCEEEEEEEECCCCCCHH VFVSALQDRYALKKSSTTASVGVGVLGSLSLPVGSSGDSLVRVSSTTVQDAAFYKRFFER HHHHHHHHHHHHHCCCCCHHHHHHHHEEECCCCCCCCCCEEEEECCHHHHHHHHHHHHHH LNAYLPKVTEAVPATASAAPAPAHAAAPAAAATPAANTQTPASPAPAAANPATVAHPPVA HHHHHHHHHHHCCCCCCCCCCCCHHCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PLPVQAQDPPPAPAKVPQTEPATQP CCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA