Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is zraS [H]
Identifier: 84625369
GI number: 84625369
Start: 4196210
End: 4197712
Strand: Reverse
Name: zraS [H]
Synonym: XOO_3712
Alternate gene names: 84625369
Gene position: 4197712-4196210 (Counterclockwise)
Preceding gene: 84625370
Following gene: 84625368
Centisome position: 84.97
GC content: 63.94
Gene sequence:
>1503_bases ATGCCGCATGAGGGGGGCAATCTGGAGCAGTTGAAGATCCTTCTGGTGGAAGATTCACCAGAAGATGCCGAGCTGTTGTC CGATCAGTTGCTGGATGCCGGACTGGATGCGGCATTCGAGCGGGTGGACAGCGAGCCGTCGCTGCGCGCCGCGCTGGATG CGTTTCAGCCGGACATCGTGCTGTCGGATCTGAGCATGCCGGGTTTCTCTGGGCACCAGGCGCTGCGGCTGGTGCGCCAG AATGGTGCCACGCCTTTCATCTTCGTCTCCGGCACCATGGGTGAAGAGACGGCAGTCAAGGCACTGCAGGACGGCGCCAA TGACTACATCATCAAACACAATCCGACGCGTTTGCCGAGCGCGGTGATCCGTGCGATCCGCGAGGCGCGCGCCGATCTGG AACGCCAGCGCGTGGAAAGCGAGCTGATGCGCGCGCAGCGTCTGGAAAGCCTGGCAATGCTGGCGGCCGGTCTGAGCCAC GACCTGCGCAATATCCTGCAGCCGTTGTTGATCGTGCCCGATCTGCTGGCCGGGCGCACTGACGACCCGCAGCTGCGTCA GCTGGCCAATGTGGTGGCCGAATGCGGCCGGCGCGGGCATGAAATGGCCGAATCGATGTTGTCGTTCGTGCGTGGGTCCA ACAAGCCGCGCGAGCAGGTGTCCATCACCAATCTATTCCAGGCCGTGCAGATGCTGCTCAAGAGCAGCCTGCCCGATGGC GTGCGCCTGCAGATGGACGCCATCGCCCCGGATCTCACCATCGAGGCCAACTACACCGAATTGCAGCAATGCCTGCTCAA CCTCGGCTTGAACGCGATCCAGGCGATGCCGGAGGGCGGCAGGCTGATCCTGGCCGCCGATCGCTATGATGCCTCGCGCG TGCGCATGAGCGTGGCCGACACCGGCGTGGGCATGAGCGATGAAACCCGCGCGCGCCTGTTCAGCCCGTTCTTCACCACC AAGGCGGATGGCACCGGGTTGGGACTGATTTCGTGCAAGCGCATCATCGAAAGCTATGGCGGCAGCATCGTGGTCGATAG CCGGCTGGACGAAGGCACGCGCTTTGACATGATCGTGCCGATGCGCGCGGTGTCGGCGGTGGTGACGGAAGCCGAACAGC CGCTCCCGCTTGGCCATGGGCAGCGCATTTTGCTGGTGGATGGCGAGGCCACGCGCCTGTCGTTGCTGGGGAATGCACTT TCCAGCCAGGGCTATCAGCCGCAGCTGGCCGGCGATGGTGCCGCGGCGCTGCAGTTGGTGCAGCAGCACGCCATGCCGGA CCTGGTGATCATCGACAGCGACATCATCCTGCTCTCGGCAGTGAGCGTGCTGTTGAGCATGCAGGAGCTGGGGTACCAGG GCCCGGCGATCGTGCTGGAAGATGTTGGCGCGCCGCTGCAGCGTTCGCATTTTCCGTCGGATCTGCCGGTGCATGTATTG CGCAAACCCCTGGAAATGCGCCGGGTCTTTCGCGCCGTTTCGCACGCGCTGGAAGTGGCCTGA
Upstream 100 bases:
>100_bases CGTGGTCAAGCCGGTGGATGTGGATCAGTTCTTCAACGCGGTCAAGACGCTCGGCACGTTCTGGGCGGTCATCAACCAGG CACCGGAGCTGGACTGAACC
Downstream 100 bases:
>100_bases CAGCACGTTTCTGCGCACCCGATGCGGGCTGGATAGATGCGATACGATTGCAACAGTTGACGCCCACGCCGGCCGCATGC GCGAATAACGTATGACTACC
Product: histidine kinase-response regulator hybrid protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 500; Mature: 499
Protein sequence:
>500_residues MPHEGGNLEQLKILLVEDSPEDAELLSDQLLDAGLDAAFERVDSEPSLRAALDAFQPDIVLSDLSMPGFSGHQALRLVRQ NGATPFIFVSGTMGEETAVKALQDGANDYIIKHNPTRLPSAVIRAIREARADLERQRVESELMRAQRLESLAMLAAGLSH DLRNILQPLLIVPDLLAGRTDDPQLRQLANVVAECGRRGHEMAESMLSFVRGSNKPREQVSITNLFQAVQMLLKSSLPDG VRLQMDAIAPDLTIEANYTELQQCLLNLGLNAIQAMPEGGRLILAADRYDASRVRMSVADTGVGMSDETRARLFSPFFTT KADGTGLGLISCKRIIESYGGSIVVDSRLDEGTRFDMIVPMRAVSAVVTEAEQPLPLGHGQRILLVDGEATRLSLLGNAL SSQGYQPQLAGDGAAALQLVQQHAMPDLVIIDSDIILLSAVSVLLSMQELGYQGPAIVLEDVGAPLQRSHFPSDLPVHVL RKPLEMRRVFRAVSHALEVA
Sequences:
>Translated_500_residues MPHEGGNLEQLKILLVEDSPEDAELLSDQLLDAGLDAAFERVDSEPSLRAALDAFQPDIVLSDLSMPGFSGHQALRLVRQ NGATPFIFVSGTMGEETAVKALQDGANDYIIKHNPTRLPSAVIRAIREARADLERQRVESELMRAQRLESLAMLAAGLSH DLRNILQPLLIVPDLLAGRTDDPQLRQLANVVAECGRRGHEMAESMLSFVRGSNKPREQVSITNLFQAVQMLLKSSLPDG VRLQMDAIAPDLTIEANYTELQQCLLNLGLNAIQAMPEGGRLILAADRYDASRVRMSVADTGVGMSDETRARLFSPFFTT KADGTGLGLISCKRIIESYGGSIVVDSRLDEGTRFDMIVPMRAVSAVVTEAEQPLPLGHGQRILLVDGEATRLSLLGNAL SSQGYQPQLAGDGAAALQLVQQHAMPDLVIIDSDIILLSAVSVLLSMQELGYQGPAIVLEDVGAPLQRSHFPSDLPVHVL RKPLEMRRVFRAVSHALEVA >Mature_499_residues PHEGGNLEQLKILLVEDSPEDAELLSDQLLDAGLDAAFERVDSEPSLRAALDAFQPDIVLSDLSMPGFSGHQALRLVRQN GATPFIFVSGTMGEETAVKALQDGANDYIIKHNPTRLPSAVIRAIREARADLERQRVESELMRAQRLESLAMLAAGLSHD LRNILQPLLIVPDLLAGRTDDPQLRQLANVVAECGRRGHEMAESMLSFVRGSNKPREQVSITNLFQAVQMLLKSSLPDGV RLQMDAIAPDLTIEANYTELQQCLLNLGLNAIQAMPEGGRLILAADRYDASRVRMSVADTGVGMSDETRARLFSPFFTTK ADGTGLGLISCKRIIESYGGSIVVDSRLDEGTRFDMIVPMRAVSAVVTEAEQPLPLGHGQRILLVDGEATRLSLLGNALS SQGYQPQLAGDGAAALQLVQQHAMPDLVIIDSDIILLSAVSVLLSMQELGYQGPAIVLEDVGAPLQRSHFPSDLPVHVLR KPLEMRRVFRAVSHALEVA
Specific function: Member of the two-component regulatory system zraS/zraR. May function as a membrane-associated protein kinase that phosphorylates zraR in response to high concentrations of zinc or lead in the medium [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=248, Percent_Identity=31.8548387096774, Blast_Score=116, Evalue=3e-27, Organism=Escherichia coli, GI1788549, Length=231, Percent_Identity=32.034632034632, Blast_Score=115, Evalue=5e-27, Organism=Escherichia coli, GI1790300, Length=269, Percent_Identity=29.7397769516729, Blast_Score=86, Evalue=4e-18, Organism=Escherichia coli, GI1788713, Length=220, Percent_Identity=29.5454545454545, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI145693157, Length=378, Percent_Identity=25.9259259259259, Blast_Score=72, Evalue=7e-14, Organism=Escherichia coli, GI87081816, Length=343, Percent_Identity=25.6559766763848, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI48994928, Length=186, Percent_Identity=27.9569892473118, Blast_Score=63, Evalue=5e-11, Organism=Escherichia coli, GI1789149, Length=281, Percent_Identity=24.5551601423488, Blast_Score=62, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 54287; Mature: 54156
Theoretical pI: Translated: 4.74; Mature: 4.74
Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHEGGNLEQLKILLVEDSPEDAELLSDQLLDAGLDAAFERVDSEPSLRAALDAFQPDIV CCCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEE LSDLSMPGFSGHQALRLVRQNGATPFIFVSGTMGEETAVKALQDGANDYIIKHNPTRLPS EECCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCCEEEECCCCCCHH AVIRAIREARADLERQRVESELMRAQRLESLAMLAAGLSHDLRNILQPLLIVPDLLAGRT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DDPQLRQLANVVAECGRRGHEMAESMLSFVRGSNKPREQVSITNLFQAVQMLLKSSLPDG CCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCC VRLQMDAIAPDLTIEANYTELQQCLLNLGLNAIQAMPEGGRLILAADRYDASRVRMSVAD CEEEECCCCCCCEEECCHHHHHHHHHHHCCHHHHCCCCCCEEEEEECCCCHHHHEEEHHH TGVGMSDETRARLFSPFFTTKADGTGLGLISCKRIIESYGGSIVVDSRLDEGTRFDMIVP CCCCCCCCHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEHH MRAVSAVVTEAEQPLPLGHGQRILLVDGEATRLSLLGNALSSQGYQPQLAGDGAAALQLV HHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH QQHAMPDLVIIDSDIILLSAVSVLLSMQELGYQGPAIVLEDVGAPLQRSHFPSDLPVHVL HHHCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHCCCCCCCCHHHH RKPLEMRRVFRAVSHALEVA HCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure PHEGGNLEQLKILLVEDSPEDAELLSDQLLDAGLDAAFERVDSEPSLRAALDAFQPDIV CCCCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCEE LSDLSMPGFSGHQALRLVRQNGATPFIFVSGTMGEETAVKALQDGANDYIIKHNPTRLPS EECCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCCEEEECCCCCCHH AVIRAIREARADLERQRVESELMRAQRLESLAMLAAGLSHDLRNILQPLLIVPDLLAGRT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC DDPQLRQLANVVAECGRRGHEMAESMLSFVRGSNKPREQVSITNLFQAVQMLLKSSLPDG CCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCC VRLQMDAIAPDLTIEANYTELQQCLLNLGLNAIQAMPEGGRLILAADRYDASRVRMSVAD CEEEECCCCCCCEEECCHHHHHHHHHHHCCHHHHCCCCCCEEEEEECCCCHHHHEEEHHH TGVGMSDETRARLFSPFFTTKADGTGLGLISCKRIIESYGGSIVVDSRLDEGTRFDMIVP CCCCCCCCHHHHHHCCHHCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEHH MRAVSAVVTEAEQPLPLGHGQRILLVDGEATRLSLLGNALSSQGYQPQLAGDGAAALQLV HHHHHHHHHHCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHH QQHAMPDLVIIDSDIILLSAVSVLLSMQELGYQGPAIVLEDVGAPLQRSHFPSDLPVHVL HHHCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHCCCCCCCCHHHH RKPLEMRRVFRAVSHALEVA HCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]