Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84625366
Identifier: 84625366
GI number: 84625366
Start: 4193445
End: 4194698
Strand: Reverse
Name: 84625366
Synonym: XOO_3710
Alternate gene names: NA
Gene position: 4194698-4193445 (Counterclockwise)
Preceding gene: 84625368
Following gene: 84625364
Centisome position: 84.91
GC content: 65.15
Gene sequence:
>1254_bases ATGGCGTACTCGCTCGGCGTTGCGGAGGGCTCGGCTATCCTGTGCATTGTCCCCGCAACCGGTGCCCGCATGCACGCCGA CCTTCCCACCCCCGATCCGGACGCGCTGGCGCACAGCGACCGGCTGGCTGCGCACGTGCGCGCCGAAATCCAGGCCGCCG GCGGTGCGATTCCGTTTTCGCGCTTCATGGAGCTGGCGCTGTATGCGCCCGGCCTGGGCTATTACAGCGCTGGCGCGAGC AAGTTCGGCGAGGCCGGCGATTTCGTCACCGCCCCGGAAGTGGGGCCGTTGTTTGCGGCCACCGTCTCCGGCGCGTTAGC GCCAGTGCTGCAGCAGCTTGGGCCGCAGGCGCGGGTGCTGGAAGTGGGCGGCGGCAGCGGTGCGTTCGCTGAGGTCATGC TCAAGCGGCTGCTGGAGCTGGACGCGCTACCCGAACGTTACGCGATCCTGGAACCCAGCGCAGACCTGCGCGAGCGTCAG CGCGAGCGGCTGGGGCGCAGTCTGATTCCGCCGGTGTTCGATCTGGTGGAATGGCTGGATGCGCCGTTCCCGGACGATTG GGACGGTGTGCTGTTCGCCAACGAAGTCATCGATGCGTTGCCCACGCCGCGCTTCGCACTGCGCGATGGCGAGGTGTATG AGGAAACCGTGGTACTGGATGCGCAGCAGCAGTTCGCACGTGGCGAGCAACCGGCCGATGCATTGCTGAGCGCAGCCGTG CGCCACCTTGAACGCTACCTGGAGCAGCCGTTCGCCGATGGCTATCGCTCCGAGTTGCTGCCGCAGTTACCGTACTGGAT CCAGGCAGTGGCCGGCGGTTTGAAGCGCGGTGCGATGTTGTTCGTCGACTACGGTTACCCGCGTGGCGAGTTCTATCGTG CGCAGCGCGAGGACGGCACGTTGCGTGCGTTCTATCGGCATCGCATGCATGAAGATCTTTACCGTTGGCCGGGTCTGCAG GATCTAACCGCATCGGTGGACTTCACCGCGTTGGCCGAGGCAGGCACCGGCGCAGGTTTCGAGCTGGCCGGTTACTGCAC GCAGGCGAGCTTTTTACTCGGTAACGGGCTGGATACATTGTTGGCGCAAGCCGATACGCGTACTGATGAAGTAGGGCGGA TGCGTCTGCGCGAGCAGATCAAGCGGCTGACCCTCCCCAGCGAGATGGGCGAGCGTTTTCAGGTGATGGGCTTCTCGCGC GATGTGGACTTTGCACCCGCGTTCCTGTCCGGTGATCTCACGTGGCGGTTGTGA
Upstream 100 bases:
>100_bases CACGGCCACGCGGTAGCCGGCGGCGTGCAGCGTGGTGGCGATGTGCGCGCCGATGCGGCGGGCGGCGCCGGTGATCAACA CCACCTTGGAACTGTCTGTC
Downstream 100 bases:
>100_bases CGTCGGCATTGCGGCCGTTTGATCGGCCGCGGTTGTGGGTGGGCTTGTGGATCACGGCAATGGTTGTGGTGATTGCCGCA TGCCTGGGTCTACCGCCGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 417; Mature: 416
Protein sequence:
>417_residues MAYSLGVAEGSAILCIVPATGARMHADLPTPDPDALAHSDRLAAHVRAEIQAAGGAIPFSRFMELALYAPGLGYYSAGAS KFGEAGDFVTAPEVGPLFAATVSGALAPVLQQLGPQARVLEVGGGSGAFAEVMLKRLLELDALPERYAILEPSADLRERQ RERLGRSLIPPVFDLVEWLDAPFPDDWDGVLFANEVIDALPTPRFALRDGEVYEETVVLDAQQQFARGEQPADALLSAAV RHLERYLEQPFADGYRSELLPQLPYWIQAVAGGLKRGAMLFVDYGYPRGEFYRAQREDGTLRAFYRHRMHEDLYRWPGLQ DLTASVDFTALAEAGTGAGFELAGYCTQASFLLGNGLDTLLAQADTRTDEVGRMRLREQIKRLTLPSEMGERFQVMGFSR DVDFAPAFLSGDLTWRL
Sequences:
>Translated_417_residues MAYSLGVAEGSAILCIVPATGARMHADLPTPDPDALAHSDRLAAHVRAEIQAAGGAIPFSRFMELALYAPGLGYYSAGAS KFGEAGDFVTAPEVGPLFAATVSGALAPVLQQLGPQARVLEVGGGSGAFAEVMLKRLLELDALPERYAILEPSADLRERQ RERLGRSLIPPVFDLVEWLDAPFPDDWDGVLFANEVIDALPTPRFALRDGEVYEETVVLDAQQQFARGEQPADALLSAAV RHLERYLEQPFADGYRSELLPQLPYWIQAVAGGLKRGAMLFVDYGYPRGEFYRAQREDGTLRAFYRHRMHEDLYRWPGLQ DLTASVDFTALAEAGTGAGFELAGYCTQASFLLGNGLDTLLAQADTRTDEVGRMRLREQIKRLTLPSEMGERFQVMGFSR DVDFAPAFLSGDLTWRL >Mature_416_residues AYSLGVAEGSAILCIVPATGARMHADLPTPDPDALAHSDRLAAHVRAEIQAAGGAIPFSRFMELALYAPGLGYYSAGASK FGEAGDFVTAPEVGPLFAATVSGALAPVLQQLGPQARVLEVGGGSGAFAEVMLKRLLELDALPERYAILEPSADLRERQR ERLGRSLIPPVFDLVEWLDAPFPDDWDGVLFANEVIDALPTPRFALRDGEVYEETVVLDAQQQFARGEQPADALLSAAVR HLERYLEQPFADGYRSELLPQLPYWIQAVAGGLKRGAMLFVDYGYPRGEFYRAQREDGTLRAFYRHRMHEDLYRWPGLQD LTASVDFTALAEAGTGAGFELAGYCTQASFLLGNGLDTLLAQADTRTDEVGRMRLREQIKRLTLPSEMGERFQVMGFSRD VDFAPAFLSGDLTWRL
Specific function: Unknown
COG id: COG1565
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI21396487, Length=382, Percent_Identity=26.7015706806283, Blast_Score=79, Evalue=1e-14, Organism=Drosophila melanogaster, GI24645885, Length=419, Percent_Identity=28.4009546539379, Blast_Score=91, Evalue=2e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45706; Mature: 45575
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYSLGVAEGSAILCIVPATGARMHADLPTPDPDALAHSDRLAAHVRAEIQAAGGAIPFS CCEECCCCCCCEEEEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHH RFMELALYAPGLGYYSAGASKFGEAGDFVTAPEVGPLFAATVSGALAPVLQQLGPQARVL HHHHHHHHCCCCCHHHCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEE EVGGGSGAFAEVMLKRLLELDALPERYAILEPSADLRERQRERLGRSLIPPVFDLVEWLD EECCCCCHHHHHHHHHHHHHHCCCCHHEEECCCHHHHHHHHHHHCHHCCHHHHHHHHHHC APFPDDWDGVLFANEVIDALPTPRFALRDGEVYEETVVLDAQQQFARGEQPADALLSAAV CCCCCCCCCEEEHHHHHHHCCCCCEEECCCCHHHHHEEEECHHHHHCCCCCHHHHHHHHH RHLERYLEQPFADGYRSELLPQLPYWIQAVAGGLKRGAMLFVDYGYPRGEFYRAQREDGT HHHHHHHHCHHCCCHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCCCCCHHEECCCCCCH LRAFYRHRMHEDLYRWPGLQDLTASVDFTALAEAGTGAGFELAGYCTQASFLLGNGLDTL HHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHCCCCCCCEEHHHHHHHHHHHHHCCHHHH LAQADTRTDEVGRMRLREQIKRLTLPSEMGERFQVMGFSRDVDFAPAFLSGDLTWRL HHHCCCCHHHHHHHHHHHHHHHCCCCHHHCCCEEEEECCCCCCCCCHHHCCCCEECC >Mature Secondary Structure AYSLGVAEGSAILCIVPATGARMHADLPTPDPDALAHSDRLAAHVRAEIQAAGGAIPFS CEECCCCCCCEEEEEEECCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHH RFMELALYAPGLGYYSAGASKFGEAGDFVTAPEVGPLFAATVSGALAPVLQQLGPQARVL HHHHHHHHCCCCCHHHCCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEE EVGGGSGAFAEVMLKRLLELDALPERYAILEPSADLRERQRERLGRSLIPPVFDLVEWLD EECCCCCHHHHHHHHHHHHHHCCCCHHEEECCCHHHHHHHHHHHCHHCCHHHHHHHHHHC APFPDDWDGVLFANEVIDALPTPRFALRDGEVYEETVVLDAQQQFARGEQPADALLSAAV CCCCCCCCCEEEHHHHHHHCCCCCEEECCCCHHHHHEEEECHHHHHCCCCCHHHHHHHHH RHLERYLEQPFADGYRSELLPQLPYWIQAVAGGLKRGAMLFVDYGYPRGEFYRAQREDGT HHHHHHHHCHHCCCHHHHHHHCCHHHHHHHHHHHCCCCEEEEECCCCCCHHEECCCCCCH LRAFYRHRMHEDLYRWPGLQDLTASVDFTALAEAGTGAGFELAGYCTQASFLLGNGLDTL HHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHCCCCCCCEEHHHHHHHHHHHHHCCHHHH LAQADTRTDEVGRMRLREQIKRLTLPSEMGERFQVMGFSRDVDFAPAFLSGDLTWRL HHHCCCCHHHHHHHHHHHHHHHCCCCHHHCCCEEEEECCCCCCCCCHHHCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA