Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
---|---|
Accession | NC_007705 |
Length | 4,940,217 |
Click here to switch to the map view.
The map label for this gene is engB [H]
Identifier: 84625320
GI number: 84625320
Start: 4139285
End: 4139908
Strand: Reverse
Name: engB [H]
Synonym: XOO_3663
Alternate gene names: 84625320
Gene position: 4139908-4139285 (Counterclockwise)
Preceding gene: 84625326
Following gene: 84625319
Centisome position: 83.8
GC content: 66.51
Gene sequence:
>624_bases ATGTCGCTCCTTATCGAACAAGCCCGCTACCACCTGTCCGCCCACAACGCCCGGCAATTGCCCGACGATGGCGGCTACGA GGTGGCCTTCGCCGGCCGCTCCAACGCCGGAAAATCCAGCGCGCTCAATGCGCTGACCCGCCAGAACGCGCTGGCGCGCG TGTCCAAGACGCCCGGTCGCACCCAGCAGCTGGTGTTCTTCCAGATCCAGCCCGAGCGCTACCTGGTGGACCTGCCCGGC TACGGCTACGCCAAGGTGCCGCAGGACCTGCAGGCGCACTGGCAGGCCTTCATCGACCGCTATTTCCGCACCCGCGAAGC CCTGCGCGGGTTGGTGGTGGTGATGGATATCCGCCACCCGCTGAAGGATTACGACCTGCAGATGCTCGGTTATGCGGCCG AACGCGGTCTGCCCGCGCACGGGTTGCTGACCAAGGCCGACAAGCTCGGCCGTGGTCAGCAGATGCAAACCCTGCAGAAG GTCAAGAAGGAAGTCACCTCGCGCTTCGGCGACAGCGTGACGGTGCAGACCTACTCGGGCCAATCGCGCCAGGGCGTGGA CGAATTGCGCGGCATCGTCGGCGGCTGGCTGGGCCTGATCGCGGAGCCGCTGGCCGAGCACTGA
Upstream 100 bases:
>100_bases GGCAGTGGCAGGCGTGCTTCGATTATCGACACGCCTTTGCGCCAGGGTCAACGAACGGTGCAGCAAAACTGCCGGGCCCC GGACGTGCGATCCTAGTGCG
Downstream 100 bases:
>100_bases GGGCGCGCAGCCACGCTGCTCCGATCGCTCGGACGCAGCGCAGGTGCGCACACGGATGGCCGCCCACGGTGTCGGTGCGG CGCTTGCGTCCGCATTAGAA
Product: ribosome biogenesis GTP-binding protein YsxC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MSLLIEQARYHLSAHNARQLPDDGGYEVAFAGRSNAGKSSALNALTRQNALARVSKTPGRTQQLVFFQIQPERYLVDLPG YGYAKVPQDLQAHWQAFIDRYFRTREALRGLVVVMDIRHPLKDYDLQMLGYAAERGLPAHGLLTKADKLGRGQQMQTLQK VKKEVTSRFGDSVTVQTYSGQSRQGVDELRGIVGGWLGLIAEPLAEH
Sequences:
>Translated_207_residues MSLLIEQARYHLSAHNARQLPDDGGYEVAFAGRSNAGKSSALNALTRQNALARVSKTPGRTQQLVFFQIQPERYLVDLPG YGYAKVPQDLQAHWQAFIDRYFRTREALRGLVVVMDIRHPLKDYDLQMLGYAAERGLPAHGLLTKADKLGRGQQMQTLQK VKKEVTSRFGDSVTVQTYSGQSRQGVDELRGIVGGWLGLIAEPLAEH >Mature_206_residues SLLIEQARYHLSAHNARQLPDDGGYEVAFAGRSNAGKSSALNALTRQNALARVSKTPGRTQQLVFFQIQPERYLVDLPGY GYAKVPQDLQAHWQAFIDRYFRTREALRGLVVVMDIRHPLKDYDLQMLGYAAERGLPAHGLLTKADKLGRGQQMQTLQKV KKEVTSRFGDSVTVQTYSGQSRQGVDELRGIVGGWLGLIAEPLAEH
Specific function: Necessary for normal cell division and for the maintenance of normal septation [H]
COG id: COG0218
COG function: function code R; Predicted GTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]
Homologues:
Organism=Homo sapiens, GI56549685, Length=192, Percent_Identity=29.6875, Blast_Score=79, Evalue=2e-15, Organism=Escherichia coli, GI145693205, Length=205, Percent_Identity=49.7560975609756, Blast_Score=197, Evalue=3e-52, Organism=Saccharomyces cerevisiae, GI6320543, Length=190, Percent_Identity=28.4210526315789, Blast_Score=71, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019987 - InterPro: IPR002917 [H]
Pfam domain/function: PF01926 MMR_HSR1 [H]
EC number: NA
Molecular weight: Translated: 23106; Mature: 22974
Theoretical pI: Translated: 9.97; Mature: 9.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLLIEQARYHLSAHNARQLPDDGGYEVAFAGRSNAGKSSALNALTRQNALARVSKTPGR CCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCC TQQLVFFQIQPERYLVDLPGYGYAKVPQDLQAHWQAFIDRYFRTREALRGLVVVMDIRHP CEEEEEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCC LKDYDLQMLGYAAERGLPAHGLLTKADKLGRGQQMQTLQKVKKEVTSRFGDSVTVQTYSG HHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEECC QSRQGVDELRGIVGGWLGLIAEPLAEH CCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SLLIEQARYHLSAHNARQLPDDGGYEVAFAGRSNAGKSSALNALTRQNALARVSKTPGR CHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCC TQQLVFFQIQPERYLVDLPGYGYAKVPQDLQAHWQAFIDRYFRTREALRGLVVVMDIRHP CEEEEEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCC LKDYDLQMLGYAAERGLPAHGLLTKADKLGRGQQMQTLQKVKKEVTSRFGDSVTVQTYSG HHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEECC QSRQGVDELRGIVGGWLGLIAEPLAEH CCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]