Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

Click here to switch to the map view.

The map label for this gene is engB [H]

Identifier: 84625320

GI number: 84625320

Start: 4139285

End: 4139908

Strand: Reverse

Name: engB [H]

Synonym: XOO_3663

Alternate gene names: 84625320

Gene position: 4139908-4139285 (Counterclockwise)

Preceding gene: 84625326

Following gene: 84625319

Centisome position: 83.8

GC content: 66.51

Gene sequence:

>624_bases
ATGTCGCTCCTTATCGAACAAGCCCGCTACCACCTGTCCGCCCACAACGCCCGGCAATTGCCCGACGATGGCGGCTACGA
GGTGGCCTTCGCCGGCCGCTCCAACGCCGGAAAATCCAGCGCGCTCAATGCGCTGACCCGCCAGAACGCGCTGGCGCGCG
TGTCCAAGACGCCCGGTCGCACCCAGCAGCTGGTGTTCTTCCAGATCCAGCCCGAGCGCTACCTGGTGGACCTGCCCGGC
TACGGCTACGCCAAGGTGCCGCAGGACCTGCAGGCGCACTGGCAGGCCTTCATCGACCGCTATTTCCGCACCCGCGAAGC
CCTGCGCGGGTTGGTGGTGGTGATGGATATCCGCCACCCGCTGAAGGATTACGACCTGCAGATGCTCGGTTATGCGGCCG
AACGCGGTCTGCCCGCGCACGGGTTGCTGACCAAGGCCGACAAGCTCGGCCGTGGTCAGCAGATGCAAACCCTGCAGAAG
GTCAAGAAGGAAGTCACCTCGCGCTTCGGCGACAGCGTGACGGTGCAGACCTACTCGGGCCAATCGCGCCAGGGCGTGGA
CGAATTGCGCGGCATCGTCGGCGGCTGGCTGGGCCTGATCGCGGAGCCGCTGGCCGAGCACTGA

Upstream 100 bases:

>100_bases
GGCAGTGGCAGGCGTGCTTCGATTATCGACACGCCTTTGCGCCAGGGTCAACGAACGGTGCAGCAAAACTGCCGGGCCCC
GGACGTGCGATCCTAGTGCG

Downstream 100 bases:

>100_bases
GGGCGCGCAGCCACGCTGCTCCGATCGCTCGGACGCAGCGCAGGTGCGCACACGGATGGCCGCCCACGGTGTCGGTGCGG
CGCTTGCGTCCGCATTAGAA

Product: ribosome biogenesis GTP-binding protein YsxC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 206

Protein sequence:

>207_residues
MSLLIEQARYHLSAHNARQLPDDGGYEVAFAGRSNAGKSSALNALTRQNALARVSKTPGRTQQLVFFQIQPERYLVDLPG
YGYAKVPQDLQAHWQAFIDRYFRTREALRGLVVVMDIRHPLKDYDLQMLGYAAERGLPAHGLLTKADKLGRGQQMQTLQK
VKKEVTSRFGDSVTVQTYSGQSRQGVDELRGIVGGWLGLIAEPLAEH

Sequences:

>Translated_207_residues
MSLLIEQARYHLSAHNARQLPDDGGYEVAFAGRSNAGKSSALNALTRQNALARVSKTPGRTQQLVFFQIQPERYLVDLPG
YGYAKVPQDLQAHWQAFIDRYFRTREALRGLVVVMDIRHPLKDYDLQMLGYAAERGLPAHGLLTKADKLGRGQQMQTLQK
VKKEVTSRFGDSVTVQTYSGQSRQGVDELRGIVGGWLGLIAEPLAEH
>Mature_206_residues
SLLIEQARYHLSAHNARQLPDDGGYEVAFAGRSNAGKSSALNALTRQNALARVSKTPGRTQQLVFFQIQPERYLVDLPGY
GYAKVPQDLQAHWQAFIDRYFRTREALRGLVVVMDIRHPLKDYDLQMLGYAAERGLPAHGLLTKADKLGRGQQMQTLQKV
KKEVTSRFGDSVTVQTYSGQSRQGVDELRGIVGGWLGLIAEPLAEH

Specific function: Necessary for normal cell division and for the maintenance of normal septation [H]

COG id: COG0218

COG function: function code R; Predicted GTPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]

Homologues:

Organism=Homo sapiens, GI56549685, Length=192, Percent_Identity=29.6875, Blast_Score=79, Evalue=2e-15,
Organism=Escherichia coli, GI145693205, Length=205, Percent_Identity=49.7560975609756, Blast_Score=197, Evalue=3e-52,
Organism=Saccharomyces cerevisiae, GI6320543, Length=190, Percent_Identity=28.4210526315789, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019987
- InterPro:   IPR002917 [H]

Pfam domain/function: PF01926 MMR_HSR1 [H]

EC number: NA

Molecular weight: Translated: 23106; Mature: 22974

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLIEQARYHLSAHNARQLPDDGGYEVAFAGRSNAGKSSALNALTRQNALARVSKTPGR
CCHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
TQQLVFFQIQPERYLVDLPGYGYAKVPQDLQAHWQAFIDRYFRTREALRGLVVVMDIRHP
CEEEEEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCC
LKDYDLQMLGYAAERGLPAHGLLTKADKLGRGQQMQTLQKVKKEVTSRFGDSVTVQTYSG
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEECC
QSRQGVDELRGIVGGWLGLIAEPLAEH
CCCCCHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SLLIEQARYHLSAHNARQLPDDGGYEVAFAGRSNAGKSSALNALTRQNALARVSKTPGR
CHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCC
TQQLVFFQIQPERYLVDLPGYGYAKVPQDLQAHWQAFIDRYFRTREALRGLVVVMDIRHP
CEEEEEEEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCC
LKDYDLQMLGYAAERGLPAHGLLTKADKLGRGQQMQTLQKVKKEVTSRFGDSVTVQTYSG
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEEECC
QSRQGVDELRGIVGGWLGLIAEPLAEH
CCCCCHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12024217 [H]