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The map label for this gene is 84625318

Identifier: 84625318

GI number: 84625318

Start: 4138476

End: 4138823

Strand: Reverse

Name: 84625318

Synonym: XOO_3661

Alternate gene names: NA

Gene position: 4138823-4138476 (Counterclockwise)

Preceding gene: 84625319

Following gene: 84625316

Centisome position: 83.78

GC content: 59.2

Gene sequence:

>348_bases
TTGATCGTGGACGCGCAGAGCGTGAAGAACAGTGATACAGCCGGTCAGAAAGGCTATGACGCGGGCAAGAAGGTATCGGG
GATCAAGCGCCACATCGCGGTGGATACGCAAGGCTTTCCACATGCCGTTGCGGTGACCACGGCGGAAGTCACCGATCGTC
AAGGTGCGCTGGAGGCATTGAAACGCTGCCGATCGGGTTTAGGTCGGGTGAAACGCCTGCTGTGCGACAGCGGCTACACC
GGAGATCCCTTCGCCGAGGGCGTACAGGACATTCTGGGCAAGCATGTCACCGTACAGATTGCCAAGCGCAGCGAGCTGCA
TACCTTCAAGGTCATGCCCAAGCGCTAG

Upstream 100 bases:

>100_bases
GAAGTGGACGATGGAGGAATAAGCCTGCTGGAGCGGGCGCTTAAAAAATCAGGTTGGCGCGGCCCGCGAGAAACAGGGGC
GCAAGGCCTGCAGCACGTTC

Downstream 100 bases:

>100_bases
AGTGTCGAACGCAGCTTTGCCTGGCTGGAGAAGAACCGGAGGCTATGGAAGAACTGCGAGCGAAGGCTCAATACCAGCTT
GCAGTTCATCTACCTGGCGT

Product: ISXo3 transposase orfB

Products: NA

Alternate protein names: Transposase IS4 Family Protein; IS4 Family Transposase; LOW QUALITY PROTEIN Transposase; Isxo3 Transposase Protein; Transposase Fragment; Transposase IS5 Family Protein; ISXo3 Transposase ORF B; IS4 Insertion Sequence Transposase Protein; Transposase IS4 Family; Transposase Is4 Family Protein; Transposon; IS4 Family Insertion Sequence Transposase Protein; Transposase And Inactivated Derivatives-Like Protein; Transposase Is4 Family; Transposase Protein

Number of amino acids: Translated: 115; Mature: 115

Protein sequence:

>115_residues
MIVDAQSVKNSDTAGQKGYDAGKKVSGIKRHIAVDTQGFPHAVAVTTAEVTDRQGALEALKRCRSGLGRVKRLLCDSGYT
GDPFAEGVQDILGKHVTVQIAKRSELHTFKVMPKR

Sequences:

>Translated_115_residues
MIVDAQSVKNSDTAGQKGYDAGKKVSGIKRHIAVDTQGFPHAVAVTTAEVTDRQGALEALKRCRSGLGRVKRLLCDSGYT
GDPFAEGVQDILGKHVTVQIAKRSELHTFKVMPKR
>Mature_115_residues
MIVDAQSVKNSDTAGQKGYDAGKKVSGIKRHIAVDTQGFPHAVAVTTAEVTDRQGALEALKRCRSGLGRVKRLLCDSGYT
GDPFAEGVQDILGKHVTVQIAKRSELHTFKVMPKR

Specific function: Unknown

COG id: COG3293

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12419; Mature: 12419

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVDAQSVKNSDTAGQKGYDAGKKVSGIKRHIAVDTQGFPHAVAVTTAEVTDRQGALEAL
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEECCCCCCCEEEEEEHHHHCCHHHHHHH
KRCRSGLGRVKRLLCDSGYTGDPFAEGVQDILGKHVTVQIAKRSELHTFKVMPKR
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCEEEECCCCC
>Mature Secondary Structure
MIVDAQSVKNSDTAGQKGYDAGKKVSGIKRHIAVDTQGFPHAVAVTTAEVTDRQGALEAL
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHEECCCCCCCEEEEEEHHHHCCHHHHHHH
KRCRSGLGRVKRLLCDSGYTGDPFAEGVQDILGKHVTVQIAKRSELHTFKVMPKR
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA