Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
---|---|
Accession | NC_007705 |
Length | 4,940,217 |
Click here to switch to the map view.
The map label for this gene is 84625316
Identifier: 84625316
GI number: 84625316
Start: 4136063
End: 4137427
Strand: Reverse
Name: 84625316
Synonym: XOO_3659
Alternate gene names: NA
Gene position: 4137427-4136063 (Counterclockwise)
Preceding gene: 84625318
Following gene: 84625314
Centisome position: 83.75
GC content: 65.13
Gene sequence:
>1365_bases TTGTCGAGCCCCAGCCACGTTGCCGAAACGCCGATCACCGAATGCGCGGAGCTGGTCCAGGTGCTGGCCTCTGGCGAGAA GCCGAGTGCGGACTGGCGGATCGGCACCGAGCACGAAAAGTTCGGCTTCCAGCTCGACGACCTGCGCGCGCCCACCTTCG AAGGCGCACGCGGCATCGAGGCCTTGCTGACCGGGTTGACCCGTTTCGGCTGGGAGCCAGTGCAGGAAAACGGCAACACC ATCGCGCTGCTGCGCGACGGCGCGTCTGTGACGCTGGAGCCGGCCGGGCAGCTGGAGCTCTCCGGCGCGGCAGTGGAAAC CCTGCACCACACCTGCGTGGAAACCGGCACCCATCTGGACGAAGTGGCGCAAGTCGCCGGCGAGTTGCAGCTGGGGTTCC TGGGCATGGGCTTCCAGCCCAAGTGGCGTCGCGACCAGATGCCGTGGATGCCCAAGGGCCGCTACCAGATCATGAAGAAC TACATGCCCAAGGTCGGCGCGCTCGGCCTGGACATGATGACGCGCACCTGCACGGTGCAGGTGAATCTGGATTACGCCAC CGAAGCGGACATGGTGAAGAAGTTCCGCGTGTCGCTGGCGTTGCAGCCGATCGCCACCGCGTTGTTCGCCGATTCGCCGT TCACCGAAGGCAAGCCCAACGGCTACCTGAGCTACCGCTCGCACATCTGGACCGACACCGACGCCGACCGTACCGGCATG CTGGATTTCGTGTTCGAAGACGGCTTCGGCTACGAGCGCTACGTCGATTACCTGCTCGATGTGCCGATGTATTTTTCCTA CCGCGATGGTGTGTATCACGACGCCAGCGGGCAGAGCTTCCGCGACTTCATGCAGGGCAAACTGCCGGCGCTGCCGGGCG CGCTGCCGACGCTGCGCGACTGGTCGGACCACATGACCACCGCGTTTCCGGAAGTGCGCTTGAAGAAGTATCTGGAAATG CGCGGCGCCGATGCCGGCCCGTGGGATCGTCTGTGCGCGTTGTCGGCGTTCTGGGTGGGCCTGCTGTACGACCAGACCGC GTTGGATGCGGCCTGGGACCTGGTCAAGGATTTCAGTCCGACCGAGCGGCACGCGCTGCGCGATGGCGTGCCCAAGCACG CGTTGGGCTTGCCGTTCCGCAATGGCACGGCCCGCGATCTGGCAGTGGACGCGGTCGACATCGCCCGCGAAGGCCTGCGT CGCCGCGCACGCCTGAATCGAGATGGGCATGACGAAACCGGCTTTCTGGATGTGATCGCCGAGATTGCCGAAAGCGGCGT GACCGCGGCCGAACGCAAGCTGGCGCTGTATCACGGCGCATGGAACGGCGATATCGACCGCGTGTTCCGCGAGTTCGCTT ACTGA
Upstream 100 bases:
>100_bases ATCGATTGCGATATGGGCTTGGCGCCGGTCAGGCTATAGTGCGGCCCTTGCGAGGGCGGTACCCGTCCCAGATCGCTCAC CCTTACCTGCGAGCCTGCCC
Downstream 100 bases:
>100_bases GCATCCGTCGACAGTCGCCAGCGCGCGCTGGCGCCGGCACACGTCGGTCGTCAGCGATTGCGTGCGGGTGCCGCTGCAGT CGCATCAGCTGATGCAGTCA
Product: glutamate-cysteine ligase precursor
Products: NA
Alternate protein names: Glutamate/Cysteine Ligase; Gamma-Glutamylcysteine Synthetase; Glutamate/Cysteine Ligase Family Protein; Glutamate-Cysteine Ligase GshA; Glutamylcysteine Synthetase; Glutamate-Cysteine Ligase Family 2 Protein; Glutamate-Cysteine Ligase Protein; Glutathione Synthetase; Glutamate-Cysteine Ligase Gsha; Glutamate-Cysteine Ligase Protein; Glutamate-Cysteine Ligase Family Protein; Glutamate Cystein Ligase Protein; Glutamate-Cysteine Ligase GSHA
Number of amino acids: Translated: 454; Mature: 453
Protein sequence:
>454_residues MSSPSHVAETPITECAELVQVLASGEKPSADWRIGTEHEKFGFQLDDLRAPTFEGARGIEALLTGLTRFGWEPVQENGNT IALLRDGASVTLEPAGQLELSGAAVETLHHTCVETGTHLDEVAQVAGELQLGFLGMGFQPKWRRDQMPWMPKGRYQIMKN YMPKVGALGLDMMTRTCTVQVNLDYATEADMVKKFRVSLALQPIATALFADSPFTEGKPNGYLSYRSHIWTDTDADRTGM LDFVFEDGFGYERYVDYLLDVPMYFSYRDGVYHDASGQSFRDFMQGKLPALPGALPTLRDWSDHMTTAFPEVRLKKYLEM RGADAGPWDRLCALSAFWVGLLYDQTALDAAWDLVKDFSPTERHALRDGVPKHALGLPFRNGTARDLAVDAVDIAREGLR RRARLNRDGHDETGFLDVIAEIAESGVTAAERKLALYHGAWNGDIDRVFREFAY
Sequences:
>Translated_454_residues MSSPSHVAETPITECAELVQVLASGEKPSADWRIGTEHEKFGFQLDDLRAPTFEGARGIEALLTGLTRFGWEPVQENGNT IALLRDGASVTLEPAGQLELSGAAVETLHHTCVETGTHLDEVAQVAGELQLGFLGMGFQPKWRRDQMPWMPKGRYQIMKN YMPKVGALGLDMMTRTCTVQVNLDYATEADMVKKFRVSLALQPIATALFADSPFTEGKPNGYLSYRSHIWTDTDADRTGM LDFVFEDGFGYERYVDYLLDVPMYFSYRDGVYHDASGQSFRDFMQGKLPALPGALPTLRDWSDHMTTAFPEVRLKKYLEM RGADAGPWDRLCALSAFWVGLLYDQTALDAAWDLVKDFSPTERHALRDGVPKHALGLPFRNGTARDLAVDAVDIAREGLR RRARLNRDGHDETGFLDVIAEIAESGVTAAERKLALYHGAWNGDIDRVFREFAY >Mature_453_residues SSPSHVAETPITECAELVQVLASGEKPSADWRIGTEHEKFGFQLDDLRAPTFEGARGIEALLTGLTRFGWEPVQENGNTI ALLRDGASVTLEPAGQLELSGAAVETLHHTCVETGTHLDEVAQVAGELQLGFLGMGFQPKWRRDQMPWMPKGRYQIMKNY MPKVGALGLDMMTRTCTVQVNLDYATEADMVKKFRVSLALQPIATALFADSPFTEGKPNGYLSYRSHIWTDTDADRTGML DFVFEDGFGYERYVDYLLDVPMYFSYRDGVYHDASGQSFRDFMQGKLPALPGALPTLRDWSDHMTTAFPEVRLKKYLEMR GADAGPWDRLCALSAFWVGLLYDQTALDAAWDLVKDFSPTERHALRDGVPKHALGLPFRNGTARDLAVDAVDIAREGLRR RARLNRDGHDETGFLDVIAEIAESGVTAAERKLALYHGAWNGDIDRVFREFAY
Specific function: Unknown
COG id: COG3572
COG function: function code H; Gamma-glutamylcysteine synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50703; Mature: 50572
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSPSHVAETPITECAELVQVLASGEKPSADWRIGTEHEKFGFQLDDLRAPTFEGARGIE CCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEECCCHHHHCCCHHHCCCCCCCCHHHHH ALLTGLTRFGWEPVQENGNTIALLRDGASVTLEPAGQLELSGAAVETLHHTCVETGTHLD HHHHHHHHHCCCHHHCCCCEEEEEECCCEEEECCCCCEEECHHHHHHHHHHHHHCCCCHH EVAQVAGELQLGFLGMGFQPKWRRDQMPWMPKGRYQIMKNYMPKVGALGLDMMTRTCTVQ HHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHCCHHHHCEEEEEE VNLDYATEADMVKKFRVSLALQPIATALFADSPFTEGKPNGYLSYRSHIWTDTDADRTGM EEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCC LDFVFEDGFGYERYVDYLLDVPMYFSYRDGVYHDASGQSFRDFMQGKLPALPGALPTLRD EEEEEECCCCHHHHHHHHHCCCCEEEECCCCEECCCCHHHHHHHCCCCCCCCCCCCCHHH WSDHMTTAFPEVRLKKYLEMRGADAGPWDRLCALSAFWVGLLYDQTALDAAWDLVKDFSP HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TERHALRDGVPKHALGLPFRNGTARDLAVDAVDIAREGLRRRARLNRDGHDETGFLDVIA HHHHHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH EIAESGVTAAERKLALYHGAWNGDIDRVFREFAY HHHHCCCHHHHHEEEEEECCCCCCHHHHHHHHCC >Mature Secondary Structure SSPSHVAETPITECAELVQVLASGEKPSADWRIGTEHEKFGFQLDDLRAPTFEGARGIE CCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEECCCHHHHCCCHHHCCCCCCCCHHHHH ALLTGLTRFGWEPVQENGNTIALLRDGASVTLEPAGQLELSGAAVETLHHTCVETGTHLD HHHHHHHHHCCCHHHCCCCEEEEEECCCEEEECCCCCEEECHHHHHHHHHHHHHCCCCHH EVAQVAGELQLGFLGMGFQPKWRRDQMPWMPKGRYQIMKNYMPKVGALGLDMMTRTCTVQ HHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHCCHHHHCEEEEEE VNLDYATEADMVKKFRVSLALQPIATALFADSPFTEGKPNGYLSYRSHIWTDTDADRTGM EEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCC LDFVFEDGFGYERYVDYLLDVPMYFSYRDGVYHDASGQSFRDFMQGKLPALPGALPTLRD EEEEEECCCCHHHHHHHHHCCCCEEEECCCCEECCCCHHHHHHHCCCCCCCCCCCCCHHH WSDHMTTAFPEVRLKKYLEMRGADAGPWDRLCALSAFWVGLLYDQTALDAAWDLVKDFSP HHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TERHALRDGVPKHALGLPFRNGTARDLAVDAVDIAREGLRRRARLNRDGHDETGFLDVIA HHHHHHHCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH EIAESGVTAAERKLALYHGAWNGDIDRVFREFAY HHHHCCCHHHHHEEEEEECCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA