Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84625311
Identifier: 84625311
GI number: 84625311
Start: 4130811
End: 4131377
Strand: Reverse
Name: 84625311
Synonym: XOO_3654
Alternate gene names: NA
Gene position: 4131377-4130811 (Counterclockwise)
Preceding gene: 84625313
Following gene: 84625310
Centisome position: 83.63
GC content: 53.09
Gene sequence:
>567_bases ATGAAGCTTGGAATGACGCATTGCGTTGCTGTTTTCTGCCTGGTGTCCGGTTTGTCGGTTAATGCATCCGGGCGAGCTGA AGAAGTGTCGATTAACACGGCCGCTGAGCAAGTTGCTGCAGAGTTGGCTACCAATCAGGATGCACAAAAAGCGTTGCGGT TGAGGACGGCTCAGATTCATTCTGCCGAAGGTCTCGCGCAGTACCTGGTCAAAGCCGATGCCTCCAGTCCGATTAATTTG CTTTCCCCCGCTGCAAGGAAAAGGTTTGTCGAATCCTTGCGTTTCAACGCCTCCGGTGTGACATCGTTTAGATACAGCGA TATAGAAGCAGAGCTTTCGGCTAGTCAGGCGTATCGGCTACTGTCGCTGTTTGGGTTGGAAAGCAAGGTTTCCAGCATGC GCAAGATTCGCGTCGATTCCGAAGAAGACAGGGCTGTGAGTCGGGCCTATCCAGCGTCAGCCTTCACGCCTGACAGGCGC CAAGACGGAGATCATGAAGATTACGCATGCATAGGCGGGCATACTTGCGAGGAAAGCGTAGGTAAGATTTGCATGAGCGG CTGCTGA
Upstream 100 bases:
>100_bases TGCAGCCTCCACTTTGGCTTGCGTCGAAAAAGTTCCAGTAATAACGCAAGTATTTTGTTGTTGTTTCATGGAGTAACACT TCTCACGAAAAGGATCAATC
Downstream 100 bases:
>100_bases TGCCATTGCTGCACCCAGTGGCTCGTTTCATCGGCGCTGCCTTGCTCGCCTTGGCAGCGCCGATGGTTTGCGCGCAAACA CGCGACGGTTCGCTCTACGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MKLGMTHCVAVFCLVSGLSVNASGRAEEVSINTAAEQVAAELATNQDAQKALRLRTAQIHSAEGLAQYLVKADASSPINL LSPAARKRFVESLRFNASGVTSFRYSDIEAELSASQAYRLLSLFGLESKVSSMRKIRVDSEEDRAVSRAYPASAFTPDRR QDGDHEDYACIGGHTCEESVGKICMSGC
Sequences:
>Translated_188_residues MKLGMTHCVAVFCLVSGLSVNASGRAEEVSINTAAEQVAAELATNQDAQKALRLRTAQIHSAEGLAQYLVKADASSPINL LSPAARKRFVESLRFNASGVTSFRYSDIEAELSASQAYRLLSLFGLESKVSSMRKIRVDSEEDRAVSRAYPASAFTPDRR QDGDHEDYACIGGHTCEESVGKICMSGC >Mature_188_residues MKLGMTHCVAVFCLVSGLSVNASGRAEEVSINTAAEQVAAELATNQDAQKALRLRTAQIHSAEGLAQYLVKADASSPINL LSPAARKRFVESLRFNASGVTSFRYSDIEAELSASQAYRLLSLFGLESKVSSMRKIRVDSEEDRAVSRAYPASAFTPDRR QDGDHEDYACIGGHTCEESVGKICMSGC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20270; Mature: 20270
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLGMTHCVAVFCLVSGLSVNASGRAEEVSINTAAEQVAAELATNQDAQKALRLRTAQIH CCCCHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH SAEGLAQYLVKADASSPINLLSPAARKRFVESLRFNASGVTSFRYSDIEAELSASQAYRL HHHHHHHHHHHHCCCCCHHHHCHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHH LSLFGLESKVSSMRKIRVDSEEDRAVSRAYPASAFTPDRRQDGDHEDYACIGGHTCEESV HHHHCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCHHHHH GKICMSGC HHHHHCCC >Mature Secondary Structure MKLGMTHCVAVFCLVSGLSVNASGRAEEVSINTAAEQVAAELATNQDAQKALRLRTAQIH CCCCHHHHHHHHHHHHCCCCCCCCCCCEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH SAEGLAQYLVKADASSPINLLSPAARKRFVESLRFNASGVTSFRYSDIEAELSASQAYRL HHHHHHHHHHHHCCCCCHHHHCHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHH LSLFGLESKVSSMRKIRVDSEEDRAVSRAYPASAFTPDRRQDGDHEDYACIGGHTCEESV HHHHCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCHHHHH GKICMSGC HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA