Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

Click here to switch to the map view.

The map label for this gene is 84625310

Identifier: 84625310

GI number: 84625310

Start: 4129885

End: 4130829

Strand: Reverse

Name: 84625310

Synonym: XOO_3653

Alternate gene names: NA

Gene position: 4130829-4129885 (Counterclockwise)

Preceding gene: 84625311

Following gene: 84625307

Centisome position: 83.62

GC content: 64.76

Gene sequence:

>945_bases
TTGCATGAGCGGCTGCTGATGCCATTGCTGCACCCAGTGGCTCGTTTCATCGGCGCTGCCTTGCTCGCCTTGGCAGCGCC
GATGGTTTGCGCGCAAACACGCGACGGTTCGCTCTACGATGCACTGGCCGACCTGAGCGAAAGTGCTCAAGTCTCGTCTG
GCGCCCAGCGCGCAGAGGCGGTCGTTTCTCTGTACGAACGCATGGTCGGCACCGCCGATCCCTGCGCTGCCGCCAAGTTG
CCGTTTGACGAGGACGATCTGTTCCGGGCGACGGTGCTCGCCGAGGGCTATTCGTTCGACCCCCGGTATGTGCACAAACT
GGGATGTCTCTATGCGCGCCTGCAGCGACAGGGGCGGGTAACCCGCTGGCACATCATTTCCTATGCCGATGCGTTGGCCT
CGATCAGCCGGTTCGACGCGGCGAACCGGATCCTGGCAGCGTTGCCGACGCGGCCTCTCGCACCGCTGCCCACGCTTGCA
TTCGAGCGACCGTTGGGATCGTCGCGACGCGTGATAGATATCGTCTCGCCGACCCATGCTGTGGTGCGTGTGTTCGCGCT
ACACGATGACCGTCTGGCCATACTCGCGGTGGTCCATCCGGATTGCCATTTCTCGGCGAACGGGCTCAACGCGATCGTGA
GCAGCGAGGACGACCGCTGGCTGCGCGAGCGGCTCGTGCTGCTGGTCGCACCGGGCGCCAGGCCGCCCATCGACGGCATC
GCGCAATGGAATCGCCGCCAGCCCATGCTGCCGATGCACCTGATGTATCAGCGCAGCGACTGGGCTTTCCTGCACAGCAC
CGGTACGCCGACGTTCTATCTGGTGCGTGGCAGCACCATCCTCGAGACGTTCGCGGGCTGGCCCAATTCCGATGGACTGG
CCAGGATGAAGGCGGCGTTGCAGCGGGAAAGCGCGGCAGAACACGGCAGTCGGCAACGGCGCTAG

Upstream 100 bases:

>100_bases
ATCCAGCGTCAGCCTTCACGCCTGACAGGCGCCAAGACGGAGATCATGAAGATTACGCATGCATAGGCGGGCATACTTGC
GAGGAAAGCGTAGGTAAGAT

Downstream 100 bases:

>100_bases
TCGGATCAGCCTCGTGTGTCTTGCGTGCAAATTCATGTGCTGGCCTGGCAAGGCAGTGTCACGCACACCCGCAGGCCGCT
TTCGGGACGGTTGTTCAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MHERLLMPLLHPVARFIGAALLALAAPMVCAQTRDGSLYDALADLSESAQVSSGAQRAEAVVSLYERMVGTADPCAAAKL
PFDEDDLFRATVLAEGYSFDPRYVHKLGCLYARLQRQGRVTRWHIISYADALASISRFDAANRILAALPTRPLAPLPTLA
FERPLGSSRRVIDIVSPTHAVVRVFALHDDRLAILAVVHPDCHFSANGLNAIVSSEDDRWLRERLVLLVAPGARPPIDGI
AQWNRRQPMLPMHLMYQRSDWAFLHSTGTPTFYLVRGSTILETFAGWPNSDGLARMKAALQRESAAEHGSRQRR

Sequences:

>Translated_314_residues
MHERLLMPLLHPVARFIGAALLALAAPMVCAQTRDGSLYDALADLSESAQVSSGAQRAEAVVSLYERMVGTADPCAAAKL
PFDEDDLFRATVLAEGYSFDPRYVHKLGCLYARLQRQGRVTRWHIISYADALASISRFDAANRILAALPTRPLAPLPTLA
FERPLGSSRRVIDIVSPTHAVVRVFALHDDRLAILAVVHPDCHFSANGLNAIVSSEDDRWLRERLVLLVAPGARPPIDGI
AQWNRRQPMLPMHLMYQRSDWAFLHSTGTPTFYLVRGSTILETFAGWPNSDGLARMKAALQRESAAEHGSRQRR
>Mature_314_residues
MHERLLMPLLHPVARFIGAALLALAAPMVCAQTRDGSLYDALADLSESAQVSSGAQRAEAVVSLYERMVGTADPCAAAKL
PFDEDDLFRATVLAEGYSFDPRYVHKLGCLYARLQRQGRVTRWHIISYADALASISRFDAANRILAALPTRPLAPLPTLA
FERPLGSSRRVIDIVSPTHAVVRVFALHDDRLAILAVVHPDCHFSANGLNAIVSSEDDRWLRERLVLLVAPGARPPIDGI
AQWNRRQPMLPMHLMYQRSDWAFLHSTGTPTFYLVRGSTILETFAGWPNSDGLARMKAALQRESAAEHGSRQRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34751; Mature: 34751

Theoretical pI: Translated: 8.90; Mature: 8.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHERLLMPLLHPVARFIGAALLALAAPMVCAQTRDGSLYDALADLSESAQVSSGAQRAEA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VVSLYERMVGTADPCAAAKLPFDEDDLFRATVLAEGYSFDPRYVHKLGCLYARLQRQGRV
HHHHHHHHCCCCCCCHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCC
TRWHIISYADALASISRFDAANRILAALPTRPLAPLPTLAFERPLGSSRRVIDIVSPTHA
EEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCEEEEECCHHH
VVRVFALHDDRLAILAVVHPDCHFSANGLNAIVSSEDDRWLRERLVLLVAPGARPPIDGI
HHEEEEECCCCEEEEEEECCCCCCCCCCCEEEECCCCHHHHHHCEEEEECCCCCCCHHHH
AQWNRRQPMLPMHLMYQRSDWAFLHSTGTPTFYLVRGSTILETFAGWPNSDGLARMKAAL
HHCCCCCCCCCHHHHEECCCEEEEEECCCCEEEEEECCHHHHHHCCCCCCCCHHHHHHHH
QRESAAEHGSRQRR
HHHHHHHCCCCCCC
>Mature Secondary Structure
MHERLLMPLLHPVARFIGAALLALAAPMVCAQTRDGSLYDALADLSESAQVSSGAQRAEA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
VVSLYERMVGTADPCAAAKLPFDEDDLFRATVLAEGYSFDPRYVHKLGCLYARLQRQGRV
HHHHHHHHCCCCCCCHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCC
TRWHIISYADALASISRFDAANRILAALPTRPLAPLPTLAFERPLGSSRRVIDIVSPTHA
EEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCEEEEECCHHH
VVRVFALHDDRLAILAVVHPDCHFSANGLNAIVSSEDDRWLRERLVLLVAPGARPPIDGI
HHEEEEECCCCEEEEEEECCCCCCCCCCCEEEECCCCHHHHHHCEEEEECCCCCCCHHHH
AQWNRRQPMLPMHLMYQRSDWAFLHSTGTPTFYLVRGSTILETFAGWPNSDGLARMKAAL
HHCCCCCCCCCHHHHEECCCEEEEEECCCCEEEEEECCHHHHHHCCCCCCCCHHHHHHHH
QRESAAEHGSRQRR
HHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA