Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84625310
Identifier: 84625310
GI number: 84625310
Start: 4129885
End: 4130829
Strand: Reverse
Name: 84625310
Synonym: XOO_3653
Alternate gene names: NA
Gene position: 4130829-4129885 (Counterclockwise)
Preceding gene: 84625311
Following gene: 84625307
Centisome position: 83.62
GC content: 64.76
Gene sequence:
>945_bases TTGCATGAGCGGCTGCTGATGCCATTGCTGCACCCAGTGGCTCGTTTCATCGGCGCTGCCTTGCTCGCCTTGGCAGCGCC GATGGTTTGCGCGCAAACACGCGACGGTTCGCTCTACGATGCACTGGCCGACCTGAGCGAAAGTGCTCAAGTCTCGTCTG GCGCCCAGCGCGCAGAGGCGGTCGTTTCTCTGTACGAACGCATGGTCGGCACCGCCGATCCCTGCGCTGCCGCCAAGTTG CCGTTTGACGAGGACGATCTGTTCCGGGCGACGGTGCTCGCCGAGGGCTATTCGTTCGACCCCCGGTATGTGCACAAACT GGGATGTCTCTATGCGCGCCTGCAGCGACAGGGGCGGGTAACCCGCTGGCACATCATTTCCTATGCCGATGCGTTGGCCT CGATCAGCCGGTTCGACGCGGCGAACCGGATCCTGGCAGCGTTGCCGACGCGGCCTCTCGCACCGCTGCCCACGCTTGCA TTCGAGCGACCGTTGGGATCGTCGCGACGCGTGATAGATATCGTCTCGCCGACCCATGCTGTGGTGCGTGTGTTCGCGCT ACACGATGACCGTCTGGCCATACTCGCGGTGGTCCATCCGGATTGCCATTTCTCGGCGAACGGGCTCAACGCGATCGTGA GCAGCGAGGACGACCGCTGGCTGCGCGAGCGGCTCGTGCTGCTGGTCGCACCGGGCGCCAGGCCGCCCATCGACGGCATC GCGCAATGGAATCGCCGCCAGCCCATGCTGCCGATGCACCTGATGTATCAGCGCAGCGACTGGGCTTTCCTGCACAGCAC CGGTACGCCGACGTTCTATCTGGTGCGTGGCAGCACCATCCTCGAGACGTTCGCGGGCTGGCCCAATTCCGATGGACTGG CCAGGATGAAGGCGGCGTTGCAGCGGGAAAGCGCGGCAGAACACGGCAGTCGGCAACGGCGCTAG
Upstream 100 bases:
>100_bases ATCCAGCGTCAGCCTTCACGCCTGACAGGCGCCAAGACGGAGATCATGAAGATTACGCATGCATAGGCGGGCATACTTGC GAGGAAAGCGTAGGTAAGAT
Downstream 100 bases:
>100_bases TCGGATCAGCCTCGTGTGTCTTGCGTGCAAATTCATGTGCTGGCCTGGCAAGGCAGTGTCACGCACACCCGCAGGCCGCT TTCGGGACGGTTGTTCAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 314; Mature: 314
Protein sequence:
>314_residues MHERLLMPLLHPVARFIGAALLALAAPMVCAQTRDGSLYDALADLSESAQVSSGAQRAEAVVSLYERMVGTADPCAAAKL PFDEDDLFRATVLAEGYSFDPRYVHKLGCLYARLQRQGRVTRWHIISYADALASISRFDAANRILAALPTRPLAPLPTLA FERPLGSSRRVIDIVSPTHAVVRVFALHDDRLAILAVVHPDCHFSANGLNAIVSSEDDRWLRERLVLLVAPGARPPIDGI AQWNRRQPMLPMHLMYQRSDWAFLHSTGTPTFYLVRGSTILETFAGWPNSDGLARMKAALQRESAAEHGSRQRR
Sequences:
>Translated_314_residues MHERLLMPLLHPVARFIGAALLALAAPMVCAQTRDGSLYDALADLSESAQVSSGAQRAEAVVSLYERMVGTADPCAAAKL PFDEDDLFRATVLAEGYSFDPRYVHKLGCLYARLQRQGRVTRWHIISYADALASISRFDAANRILAALPTRPLAPLPTLA FERPLGSSRRVIDIVSPTHAVVRVFALHDDRLAILAVVHPDCHFSANGLNAIVSSEDDRWLRERLVLLVAPGARPPIDGI AQWNRRQPMLPMHLMYQRSDWAFLHSTGTPTFYLVRGSTILETFAGWPNSDGLARMKAALQRESAAEHGSRQRR >Mature_314_residues MHERLLMPLLHPVARFIGAALLALAAPMVCAQTRDGSLYDALADLSESAQVSSGAQRAEAVVSLYERMVGTADPCAAAKL PFDEDDLFRATVLAEGYSFDPRYVHKLGCLYARLQRQGRVTRWHIISYADALASISRFDAANRILAALPTRPLAPLPTLA FERPLGSSRRVIDIVSPTHAVVRVFALHDDRLAILAVVHPDCHFSANGLNAIVSSEDDRWLRERLVLLVAPGARPPIDGI AQWNRRQPMLPMHLMYQRSDWAFLHSTGTPTFYLVRGSTILETFAGWPNSDGLARMKAALQRESAAEHGSRQRR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34751; Mature: 34751
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHERLLMPLLHPVARFIGAALLALAAPMVCAQTRDGSLYDALADLSESAQVSSGAQRAEA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VVSLYERMVGTADPCAAAKLPFDEDDLFRATVLAEGYSFDPRYVHKLGCLYARLQRQGRV HHHHHHHHCCCCCCCHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCC TRWHIISYADALASISRFDAANRILAALPTRPLAPLPTLAFERPLGSSRRVIDIVSPTHA EEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCEEEEECCHHH VVRVFALHDDRLAILAVVHPDCHFSANGLNAIVSSEDDRWLRERLVLLVAPGARPPIDGI HHEEEEECCCCEEEEEEECCCCCCCCCCCEEEECCCCHHHHHHCEEEEECCCCCCCHHHH AQWNRRQPMLPMHLMYQRSDWAFLHSTGTPTFYLVRGSTILETFAGWPNSDGLARMKAAL HHCCCCCCCCCHHHHEECCCEEEEEECCCCEEEEEECCHHHHHHCCCCCCCCHHHHHHHH QRESAAEHGSRQRR HHHHHHHCCCCCCC >Mature Secondary Structure MHERLLMPLLHPVARFIGAALLALAAPMVCAQTRDGSLYDALADLSESAQVSSGAQRAEA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH VVSLYERMVGTADPCAAAKLPFDEDDLFRATVLAEGYSFDPRYVHKLGCLYARLQRQGRV HHHHHHHHCCCCCCCHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCC TRWHIISYADALASISRFDAANRILAALPTRPLAPLPTLAFERPLGSSRRVIDIVSPTHA EEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCEEEEECCHHH VVRVFALHDDRLAILAVVHPDCHFSANGLNAIVSSEDDRWLRERLVLLVAPGARPPIDGI HHEEEEECCCCEEEEEEECCCCCCCCCCCEEEECCCCHHHHHHCEEEEECCCCCCCHHHH AQWNRRQPMLPMHLMYQRSDWAFLHSTGTPTFYLVRGSTILETFAGWPNSDGLARMKAAL HHCCCCCCCCCHHHHEECCCEEEEEECCCCEEEEEECCHHHHHHCCCCCCCCHHHHHHHH QRESAAEHGSRQRR HHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA