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The map label for this gene is yebA [C]

Identifier: 84625253

GI number: 84625253

Start: 4068771

End: 4069712

Strand: Reverse

Name: yebA [C]

Synonym: XOO_3596

Alternate gene names: 84625253

Gene position: 4069712-4068771 (Counterclockwise)

Preceding gene: 84625255

Following gene: 84625252

Centisome position: 82.38

GC content: 65.61

Gene sequence:

>942_bases
ATGGCGTTGAAAAAATTTGTAATCAAATCCCGGCAGACCCGGGCGCAGCGTGCGGCCCGGCAGTTCCAGGACGTTGCAGC
AGATCGGCCGATGGTGGTGCTTGGTGCGGTACTGGGCCTGGGCATGCTGATCGGCGTTGGTGCAAGCACCGCCACCGGCA
TGGTGACCAATTCCGCGCTGCAGGCCAAGGTTGCGCAACAGCAGGCCGAGCTGGCCCAGGCGCAGCGCGCCTCACAGGCG
CAGGTCAATGCGCTGGCCGCCCGTCTGGGCGAGCTGCAGGCGCAGGCGACCCGCCTCAATGCATTGGGCGAGCGCCTCAC
CGAGATGGGCAAGTTGAAGGACGGCGAGTTCGACTTCGATGAGCCTGTCGGCGTCGGTGGCGGCGATGAGCCGGTCAGCG
ACATGCCGGTGAAAGAGCTGAAGGAGACGCTCGGGCAAGTGGAGCAGCAGTTCTCCGCCTCCGGCCAGCAACTGGACGTC
CTGGCCTCGCTGATGTTCGATCATCAGCTCGAGCAGAACGCGGTGCCTTCGCGGATGCCGATCCGCAACACCTACATCAC
CTCCGGCTTCGGCGGTCGCGCCGACCCGTTCGACGGTGGTTCGGCCTTCCACAAGGGTGTGGACTTCCACGCCAACGTGG
GCGACCCGGTGATGTCGGTTGCCGATGGCGTGGTCAGCTACGCCGGTGTGCGTGGCGGCTACGGCAATGTGGTGGAAGTG
GATCACGGCAATGGCTATGTGACCCGCTATGCGCACAACTCGCGTCTGGTGGTGAAGGTGGGCGATCTGGTGCGTGCCGG
CCAGCAGGTGGCGCGTGCCGGCTCCAGCGGCCGTTCTACCGCCGCACACGTGCATTTCGAGGTCTGGGCGGACGGGCGCG
TGGTCAATCCGCGCAAATTCCTGGGTGAAACCACGCCGGTGGGACGTCAAGGGCGCGGTTGA

Upstream 100 bases:

>100_bases
GCAAGGGGTCGCCAGCCTTTTCCCCCAACGCGGCCTCGATGGCCGGTTGTGGAGTGGAAGGGGTGTGTGCGTTGGACTTG
GGCTTGGACATGACACTCAT

Downstream 100 bases:

>100_bases
CGAAGGCGCGGGCCGCGCTTGATTCGTGAAGGCCCGCCCCAAGCTACAATAGGGTGTTGCCATCGACAGGGCGCAGTGCG
CCCTGTTTCGTTTACGGCGG

Product: peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 313; Mature: 312

Protein sequence:

>313_residues
MALKKFVIKSRQTRAQRAARQFQDVAADRPMVVLGAVLGLGMLIGVGASTATGMVTNSALQAKVAQQQAELAQAQRASQA
QVNALAARLGELQAQATRLNALGERLTEMGKLKDGEFDFDEPVGVGGGDEPVSDMPVKELKETLGQVEQQFSASGQQLDV
LASLMFDHQLEQNAVPSRMPIRNTYITSGFGGRADPFDGGSAFHKGVDFHANVGDPVMSVADGVVSYAGVRGGYGNVVEV
DHGNGYVTRYAHNSRLVVKVGDLVRAGQQVARAGSSGRSTAAHVHFEVWADGRVVNPRKFLGETTPVGRQGRG

Sequences:

>Translated_313_residues
MALKKFVIKSRQTRAQRAARQFQDVAADRPMVVLGAVLGLGMLIGVGASTATGMVTNSALQAKVAQQQAELAQAQRASQA
QVNALAARLGELQAQATRLNALGERLTEMGKLKDGEFDFDEPVGVGGGDEPVSDMPVKELKETLGQVEQQFSASGQQLDV
LASLMFDHQLEQNAVPSRMPIRNTYITSGFGGRADPFDGGSAFHKGVDFHANVGDPVMSVADGVVSYAGVRGGYGNVVEV
DHGNGYVTRYAHNSRLVVKVGDLVRAGQQVARAGSSGRSTAAHVHFEVWADGRVVNPRKFLGETTPVGRQGRG
>Mature_312_residues
ALKKFVIKSRQTRAQRAARQFQDVAADRPMVVLGAVLGLGMLIGVGASTATGMVTNSALQAKVAQQQAELAQAQRASQAQ
VNALAARLGELQAQATRLNALGERLTEMGKLKDGEFDFDEPVGVGGGDEPVSDMPVKELKETLGQVEQQFSASGQQLDVL
ASLMFDHQLEQNAVPSRMPIRNTYITSGFGGRADPFDGGSAFHKGVDFHANVGDPVMSVADGVVSYAGVRGGYGNVVEVD
HGNGYVTRYAHNSRLVVKVGDLVRAGQQVARAGSSGRSTAAHVHFEVWADGRVVNPRKFLGETTPVGRQGRG

Specific function: Could Be Involved In Cell Wall Degradation Or Formation. [C]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M23B family [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=122, Percent_Identity=42.6229508196721, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1789099, Length=99, Percent_Identity=39.3939393939394, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI87082297, Length=103, Percent_Identity=41.747572815534, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI87082174, Length=108, Percent_Identity=33.3333333333333, Blast_Score=72, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR016047
- InterPro:   IPR002886 [H]

Pfam domain/function: PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 33169; Mature: 33038

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALKKFVIKSRQTRAQRAARQFQDVAADRPMVVLGAVLGLGMLIGVGASTATGMVTNSAL
CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
QAKVAQQQAELAQAQRASQAQVNALAARLGELQAQATRLNALGERLTEMGKLKDGEFDFD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
EPVGVGGGDEPVSDMPVKELKETLGQVEQQFSASGQQLDVLASLMFDHQLEQNAVPSRMP
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCC
IRNTYITSGFGGRADPFDGGSAFHKGVDFHANVGDPVMSVADGVVSYAGVRGGYGNVVEV
CCCEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEE
DHGNGYVTRYAHNSRLVVKVGDLVRAGQQVARAGSSGRSTAAHVHFEVWADGRVVNPRKF
ECCCCEEEEEECCCEEEEEEHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCEEECHHHH
LGETTPVGRQGRG
HCCCCCCCCCCCC
>Mature Secondary Structure 
ALKKFVIKSRQTRAQRAARQFQDVAADRPMVVLGAVLGLGMLIGVGASTATGMVTNSAL
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
QAKVAQQQAELAQAQRASQAQVNALAARLGELQAQATRLNALGERLTEMGKLKDGEFDFD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
EPVGVGGGDEPVSDMPVKELKETLGQVEQQFSASGQQLDVLASLMFDHQLEQNAVPSRMP
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCC
IRNTYITSGFGGRADPFDGGSAFHKGVDFHANVGDPVMSVADGVVSYAGVRGGYGNVVEV
CCCEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEE
DHGNGYVTRYAHNSRLVVKVGDLVRAGQQVARAGSSGRSTAAHVHFEVWADGRVVNPRKF
ECCCCEEEEEECCCEEEEEEHHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCEEECHHHH
LGETTPVGRQGRG
HCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12522265 [H]