Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84622655
Identifier: 84622655
GI number: 84622655
Start: 1090180
End: 1091511
Strand: Direct
Name: 84622655
Synonym: XOO_0998
Alternate gene names: NA
Gene position: 1090180-1091511 (Clockwise)
Preceding gene: 84622652
Following gene: 84622660
Centisome position: 22.07
GC content: 64.34
Gene sequence:
>1332_bases ATGTCGTCGACCGTTCCTCCGCTTTCTTTCGCACGCATCCTGGCGCTCAACGCCGGATTTTTCGGTGTGCAATACAGCTT CGGGCTGCAGCAGAGCAACATGAGCCCGATCTACAACTATCTGGGCGCCGACCACGCCAACCTGCCGTACCTGTGGCTGG CCGGGCCGATGACCGGCTTGGTATTGCAGCCGTTCGTGGGAGCCTGGAGCGACCGCTCGGTGACGCGTTGGGGCCGGCGC ATGCCGTACATGGTGCTGGGCGCGCTGGTGTGCAGCCTGTGCCTGCTGGCGATGCCGTTCAGCACCGTGCTGTGGATGGC GGTGTGCCTGCTGTGGATGCTGGATGCGGCCAACAATGTGGCCATGGAGCCTTACCGTGCGCTGGTGAGCGATGTGCTGG CACCGCCGCAGCGGCCGCTGGGCTATCTCATGCAGAGTGCGTTCACCGGCCTGGCGCAGACGCTGGCTTATCTCACACCG CCCTTGCTGGTGTGGATGGGCATGAGTCAGGACGCCGCCAACGCGCACCATATTCCTTACGTCACCATCGCCGCGTTCGC GATCGGCGCGGGCTTTTCTGCTGCATCGATCCTGCTCACCGCGCGCAGTGTGCGCGAGCCGGCAATCCCGCCAGCACAGA TCGCACGCCTGCGCCAGACCGGCGCAGGCCTGGGAGCCACCGTGCGCGAAATTGGCAGCGCGGTGCGCGAGATGCCACCG ACCATGCGCCAGTTGGCGCCGGTGATGCTGTTCCAGTGGTACGCAATCTTTTGCTATTGGCAGTACATCGTGCTGTCGCT GTCGACCACATTGTTCGGCACCACCGATGCCACCTCGCATGGCTTCCGCGAGGCCGGTCTGGTCAACGGGCAGATCGGCG GTTTCTATAATTTCGTCGCGTTCCTGGCCGCATTTGCGATGGTGCCGGTGGTGCGCCGCTTCGGCCCCAAGTTCACGCAT GCGGCGTGTCTGGTCGCCGCTGGCATCGGCATGTGGCTGCTGCCGGGCATCGAGAGCCGCTGGCTGATGTTGTTGCCGAT GATCGGCATTGGCCTGGCCTGGGCCAGCATGATGGGCAACCCCTACCTGATGCTGGCCGACAGCATCCCGCCCGAGCGCA CCGGCGTGTACATGGGCTTGTTCAACCTGTTCATCGTGCTGCCGATGCTGATCCAGATCGTCACCTTGCCGCTGTATTAC GACCGCCTGCTGCACGGCGACCCGCGCAACGTGATCCGCCTGGCCGGCGCTCTGATGCTGGCAGCGGCAGTGGCGATGGT GTGTGTGCGCTTGCGCAAGCCGAAGGCTGTGTTGGTTGAGAGCCGCTCATAA
Upstream 100 bases:
>100_bases TCGAAAAAGTGCTGCGGCGCAGCGTTACAATCGATTGCAACGATGGCAGGGTACAGTGCGCTGCGGCCACTGGGAGCCGC ACCGATGCCCAGGGCTCTGC
Downstream 100 bases:
>100_bases AGCGACTGCGCGGCCGCCAGGCAGGCGCAGCCAGTGCTCGCTGCGGCATGTGCCACGCGTACACCGCGGTTCGTGCGCGC CGTCCAGGGCTGCCCGCTAC
Product: sugar transporter
Products: NA
Alternate protein names: Sugar Transporter; Transporter Facilitator Family; Facilitator Superfamily Permease; Facilitator Superfamily Protein; SugarCation Symporter; Facilitator Superfamily Transporter Permease; MFS Superfamily Sugcific Permease; Cytoplasmic Membrane Maltose Transporter MalY; Transport Protein Facilitator Superfamily Protein; Facilitator Superfamily Transmembrane Protein; Facilitator Family Transporter; Sucrose Transporter Protein
Number of amino acids: Translated: 443; Mature: 442
Protein sequence:
>443_residues MSSTVPPLSFARILALNAGFFGVQYSFGLQQSNMSPIYNYLGADHANLPYLWLAGPMTGLVLQPFVGAWSDRSVTRWGRR MPYMVLGALVCSLCLLAMPFSTVLWMAVCLLWMLDAANNVAMEPYRALVSDVLAPPQRPLGYLMQSAFTGLAQTLAYLTP PLLVWMGMSQDAANAHHIPYVTIAAFAIGAGFSAASILLTARSVREPAIPPAQIARLRQTGAGLGATVREIGSAVREMPP TMRQLAPVMLFQWYAIFCYWQYIVLSLSTTLFGTTDATSHGFREAGLVNGQIGGFYNFVAFLAAFAMVPVVRRFGPKFTH AACLVAAGIGMWLLPGIESRWLMLLPMIGIGLAWASMMGNPYLMLADSIPPERTGVYMGLFNLFIVLPMLIQIVTLPLYY DRLLHGDPRNVIRLAGALMLAAAVAMVCVRLRKPKAVLVESRS
Sequences:
>Translated_443_residues MSSTVPPLSFARILALNAGFFGVQYSFGLQQSNMSPIYNYLGADHANLPYLWLAGPMTGLVLQPFVGAWSDRSVTRWGRR MPYMVLGALVCSLCLLAMPFSTVLWMAVCLLWMLDAANNVAMEPYRALVSDVLAPPQRPLGYLMQSAFTGLAQTLAYLTP PLLVWMGMSQDAANAHHIPYVTIAAFAIGAGFSAASILLTARSVREPAIPPAQIARLRQTGAGLGATVREIGSAVREMPP TMRQLAPVMLFQWYAIFCYWQYIVLSLSTTLFGTTDATSHGFREAGLVNGQIGGFYNFVAFLAAFAMVPVVRRFGPKFTH AACLVAAGIGMWLLPGIESRWLMLLPMIGIGLAWASMMGNPYLMLADSIPPERTGVYMGLFNLFIVLPMLIQIVTLPLYY DRLLHGDPRNVIRLAGALMLAAAVAMVCVRLRKPKAVLVESRS >Mature_442_residues SSTVPPLSFARILALNAGFFGVQYSFGLQQSNMSPIYNYLGADHANLPYLWLAGPMTGLVLQPFVGAWSDRSVTRWGRRM PYMVLGALVCSLCLLAMPFSTVLWMAVCLLWMLDAANNVAMEPYRALVSDVLAPPQRPLGYLMQSAFTGLAQTLAYLTPP LLVWMGMSQDAANAHHIPYVTIAAFAIGAGFSAASILLTARSVREPAIPPAQIARLRQTGAGLGATVREIGSAVREMPPT MRQLAPVMLFQWYAIFCYWQYIVLSLSTTLFGTTDATSHGFREAGLVNGQIGGFYNFVAFLAAFAMVPVVRRFGPKFTHA ACLVAAGIGMWLLPGIESRWLMLLPMIGIGLAWASMMGNPYLMLADSIPPERTGVYMGLFNLFIVLPMLIQIVTLPLYYD RLLHGDPRNVIRLAGALMLAAAVAMVCVRLRKPKAVLVESRS
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI122937193, Length=151, Percent_Identity=27.1523178807947, Blast_Score=67, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48367; Mature: 48236
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 5.9 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSTVPPLSFARILALNAGFFGVQYSFGLQQSNMSPIYNYLGADHANLPYLWLAGPMTGL CCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHCCCCCCCCEEEECCCHHHH VLQPFVGAWSDRSVTRWGRRMPYMVLGALVCSLCLLAMPFSTVLWMAVCLLWMLDAANNV HHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC AMEPYRALVSDVLAPPQRPLGYLMQSAFTGLAQTLAYLTPPLLVWMGMSQDAANAHHIPY HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCH VTIAAFAIGAGFSAASILLTARSVREPAIPPAQIARLRQTGAGLGATVREIGSAVREMPP HHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCH TMRQLAPVMLFQWYAIFCYWQYIVLSLSTTLFGTTDATSHGFREAGLVNGQIGGFYNFVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCHHHHHHH FLAAFAMVPVVRRFGPKFTHAACLVAAGIGMWLLPGIESRWLMLLPMIGIGLAWASMMGN HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC PYLMLADSIPPERTGVYMGLFNLFIVLPMLIQIVTLPLYYDRLLHGDPRNVIRLAGALML CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH AAAVAMVCVRLRKPKAVLVESRS HHHHHHHHHHHCCCCEEEEECCC >Mature Secondary Structure SSTVPPLSFARILALNAGFFGVQYSFGLQQSNMSPIYNYLGADHANLPYLWLAGPMTGL CCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHCCCCCCCCEEEECCCHHHH VLQPFVGAWSDRSVTRWGRRMPYMVLGALVCSLCLLAMPFSTVLWMAVCLLWMLDAANNV HHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC AMEPYRALVSDVLAPPQRPLGYLMQSAFTGLAQTLAYLTPPLLVWMGMSQDAANAHHIPY HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCH VTIAAFAIGAGFSAASILLTARSVREPAIPPAQIARLRQTGAGLGATVREIGSAVREMPP HHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCH TMRQLAPVMLFQWYAIFCYWQYIVLSLSTTLFGTTDATSHGFREAGLVNGQIGGFYNFVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHCCCCCCCCCHHHHHHH FLAAFAMVPVVRRFGPKFTHAACLVAAGIGMWLLPGIESRWLMLLPMIGIGLAWASMMGN HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCC PYLMLADSIPPERTGVYMGLFNLFIVLPMLIQIVTLPLYYDRLLHGDPRNVIRLAGALML CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH AAAVAMVCVRLRKPKAVLVESRS HHHHHHHHHHHCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA