Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84622652
Identifier: 84622652
GI number: 84622652
Start: 1084668
End: 1085348
Strand: Direct
Name: 84622652
Synonym: XOO_0995
Alternate gene names: NA
Gene position: 1084668-1085348 (Clockwise)
Preceding gene: 84622651
Following gene: 84622655
Centisome position: 21.96
GC content: 63.0
Gene sequence:
>681_bases ATGAAAATTTTAATGGTGCTGACTTCCCACGACCAGCTGGGCGACACCGGCAAGAAGACCGGCTTCTGGCTGGAAGAATT CGCAGCGCCCTATTACGTGTTCAAGGATGCGGGCGCTGACATCACCCTGGTCTCGCCCAAGGGTGGCCAGCCGCCGCTGG ATCCGAAGAGCGACGAGCCCGACGCACAAACCGACGCCACCAAGCGCTTCAAGCAGGACCAGGATGCGCAGAAGGCACTG GCAAGCACGCACCGCCTGGCCGACATCAAGGCCGACGACTTCGATGTGCTGTTCTACCCGGGTGGCCACGGCCCGCTGTG GGATCTGGCCGAAGATCCCGATTCCATCGCGCTGATTGAAGCATTCGCCAAGGCCAACAAGCCGCACGGCTTGGTTTGCC ATGCACCGGGCGCCCTGCGTCGGGTCAAGGGCAGCGACGGCAAGCCACTGGTCAATGGCCGCCGCGTCACCGGCTTCACC AATGGCGAAGAAGAGGGCGTGGGCCTGACCAAAATCGTGCCGTTCCTGGTCGAAGACGTGCTGACCGAACTCGGCGGCAA CTACGAAAGGGGCGCGGATTGGGGCGTGCATGTGGTCACCGACGGCACCCTGGTCACCGGCCAGAACCCGGCCTCGTCCG AGAAGACCGCAGAAACCTTGCTCGAATTGGCGAAGCGCTGA
Upstream 100 bases:
>100_bases AATAAATACGATCCGCGCGATGTGCTCTACACGATGCTGCAACGGGCTGAACGGCACATTGGCCGCCTTGCCCAATCGGG CCATGACGCGAGGCAATGCG
Downstream 100 bases:
>100_bases TCTGGCAGTTTTATTGATCCTGCGGAAGCGCTTCGCCCGTTAGGGAGCCAAGCCCGGCACGCGCGCTACTTGCGCGCCTG CCGGAGTAGGTACCGGGGCT
Product: NonF-related protein
Products: NA
Alternate protein names: ThiJ/PfpI Domain Protein; ThiJ/PfpI Family Protein; ThiJ/PfpI; DJ-1/PfpI Family Protein; Intracellular Protease/Amidase; NonF-Related Protein; DJ-1/PfpI Family; Peptidase; DJ-1/PfpI-Family Transcriptional Regulator; DJ-1/PfpI Family Transcriptional Regulator; DJ-1/PfPI Family Protein; Intracellular Protease/Amidase ThiJ/PfpL Family; C56 Family Peptidase; Chaperone Protein; Thij/Pfpi Domain-Containing Protein; DJ-1/PfpI/ThiJ Superfamily Protein; Transcriptional Regulator; Amidotransferase; PFPI-Like Cystiene Protease; Transcriptional Regulator Fis Family; Protease; Intracellular Protease Amidase; Intracellular Protease/Amidase ThiJ/PfpL Family Protein; ThiJ/PfpI Protein; Regulatory Protein; Pfp1 Family Protein; Fis Family Transcriptional Regulator; ThiJ Protein; NonF Protein
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MKILMVLTSHDQLGDTGKKTGFWLEEFAAPYYVFKDAGADITLVSPKGGQPPLDPKSDEPDAQTDATKRFKQDQDAQKAL ASTHRLADIKADDFDVLFYPGGHGPLWDLAEDPDSIALIEAFAKANKPHGLVCHAPGALRRVKGSDGKPLVNGRRVTGFT NGEEEGVGLTKIVPFLVEDVLTELGGNYERGADWGVHVVTDGTLVTGQNPASSEKTAETLLELAKR
Sequences:
>Translated_226_residues MKILMVLTSHDQLGDTGKKTGFWLEEFAAPYYVFKDAGADITLVSPKGGQPPLDPKSDEPDAQTDATKRFKQDQDAQKAL ASTHRLADIKADDFDVLFYPGGHGPLWDLAEDPDSIALIEAFAKANKPHGLVCHAPGALRRVKGSDGKPLVNGRRVTGFT NGEEEGVGLTKIVPFLVEDVLTELGGNYERGADWGVHVVTDGTLVTGQNPASSEKTAETLLELAKR >Mature_226_residues MKILMVLTSHDQLGDTGKKTGFWLEEFAAPYYVFKDAGADITLVSPKGGQPPLDPKSDEPDAQTDATKRFKQDQDAQKAL ASTHRLADIKADDFDVLFYPGGHGPLWDLAEDPDSIALIEAFAKANKPHGLVCHAPGALRRVKGSDGKPLVNGRRVTGFT NGEEEGVGLTKIVPFLVEDVLTELGGNYERGADWGVHVVTDGTLVTGQNPASSEKTAETLLELAKR
Specific function: Unknown
COG id: COG0693
COG function: function code R; Putative intracellular protease/amidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6320742, Length=227, Percent_Identity=33.920704845815, Blast_Score=94, Evalue=1e-20, Organism=Saccharomyces cerevisiae, GI6324967, Length=235, Percent_Identity=29.3617021276596, Blast_Score=64, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6324975, Length=235, Percent_Identity=28.936170212766, Blast_Score=64, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24338; Mature: 24338
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKILMVLTSHDQLGDTGKKTGFWLEEFAAPYYVFKDAGADITLVSPKGGQPPLDPKSDEP CEEEEEEECCCCCCCCCCCCCCHHHHHCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCC DAQTDATKRFKQDQDAQKALASTHRLADIKADDFDVLFYPGGHGPLWDLAEDPDSIALIE CCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHH AFAKANKPHGLVCHAPGALRRVKGSDGKPLVNGRRVTGFTNGEEEGVGLTKIVPFLVEDV HHHHCCCCCCEEEECCHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHH LTELGGNYERGADWGVHVVTDGTLVTGQNPASSEKTAETLLELAKR HHHHCCCCCCCCCCCEEEEECCEEEECCCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MKILMVLTSHDQLGDTGKKTGFWLEEFAAPYYVFKDAGADITLVSPKGGQPPLDPKSDEP CEEEEEEECCCCCCCCCCCCCCHHHHHCCCEEEEECCCCCEEEECCCCCCCCCCCCCCCC DAQTDATKRFKQDQDAQKALASTHRLADIKADDFDVLFYPGGHGPLWDLAEDPDSIALIE CCHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHH AFAKANKPHGLVCHAPGALRRVKGSDGKPLVNGRRVTGFTNGEEEGVGLTKIVPFLVEDV HHHHCCCCCCEEEECCHHHHCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHH LTELGGNYERGADWGVHVVTDGTLVTGQNPASSEKTAETLLELAKR HHHHCCCCCCCCCCCEEEEECCEEEECCCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA