Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84622615
Identifier: 84622615
GI number: 84622615
Start: 1049437
End: 1050186
Strand: Direct
Name: 84622615
Synonym: XOO_0958
Alternate gene names: NA
Gene position: 1049437-1050186 (Clockwise)
Preceding gene: 84622614
Following gene: 84622616
Centisome position: 21.24
GC content: 66.27
Gene sequence:
>750_bases ATGGACTGGGCCTTGCGGGTGCAGGGAGTTGGCAATGCGTCGGCGGTGGCGCTTGGCTCGCCGATGGCCACGCTCGAACG CGCCGGCGTCCCATGGCTGACCATCGATTGCGGCAGCGAAGGTTTAACCGCCTATCAGGCTCATTACGGCCAGCTGCCGC AGGCGATCTTCATTACCCATGTGCATCTGGACCACGTCGGTGGGCTGGAGCGGGTGTTCGTCGACAGCTATTTCTCCGAG CGCCGCGGGCGCACACGCCTGTACGTGCCGGCGCCAGTCGTGCCGCTGCTGCAACGGCGCATCGCCGATTACCCGAACGT GCTGGCCGAAGGCGGAGCGAACTTCTGGGATGCGTTTCAGCTGGTGCCGGTCGGCGATGCGTTCTGGCACGACGGCGTAC GGCTGGAAGTGTTCCCGGTCCGCCACCACTGGCCGGAGACGGCCTACGGCCTGCGGTTGAAGGGCGCGCTGGTCTGGACC GGCGATACCCGGCCCATTCCGGAGATGTTGAAGCGCTATGCGGACGACAGCGAACTCATCGCACATGACTGCGGCGTTCA CGGCAACCCGTCGCACACTGGCGTTGACGATTTGGAGCGGGAATACCCGCAGGACCTGTTGAGCCGCATGCTGCTGTACC ACTACGCCAGCGACGCCGACGGCGATGTGCTGCGTGCGCGTGGCCACCGCGTCGCCGTGCCCGGTCAATACCTTGCGCTG GCGAACCCGACCGCAGCGACGGTGCCCTGA
Upstream 100 bases:
>100_bases CGCTGTTGAAGCTGCGCGGCAACCGCAGCGGCGAGGACGTCGATAAAGACTATGAGCGCCTGCACCGCGCCTACGAACTG GCCTGGGGCCGGGGCTACTG
Downstream 100 bases:
>100_bases TGGGCGCCTTGCTGCTGCCGAATCTTGCCACGGCGCCGATGCAGGACCGCTATGGCCGTCCGCTGCGCGATCTGCGCCTG TCGGTGATCGAGGCCTGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MDWALRVQGVGNASAVALGSPMATLERAGVPWLTIDCGSEGLTAYQAHYGQLPQAIFITHVHLDHVGGLERVFVDSYFSE RRGRTRLYVPAPVVPLLQRRIADYPNVLAEGGANFWDAFQLVPVGDAFWHDGVRLEVFPVRHHWPETAYGLRLKGALVWT GDTRPIPEMLKRYADDSELIAHDCGVHGNPSHTGVDDLEREYPQDLLSRMLLYHYASDADGDVLRARGHRVAVPGQYLAL ANPTAATVP
Sequences:
>Translated_249_residues MDWALRVQGVGNASAVALGSPMATLERAGVPWLTIDCGSEGLTAYQAHYGQLPQAIFITHVHLDHVGGLERVFVDSYFSE RRGRTRLYVPAPVVPLLQRRIADYPNVLAEGGANFWDAFQLVPVGDAFWHDGVRLEVFPVRHHWPETAYGLRLKGALVWT GDTRPIPEMLKRYADDSELIAHDCGVHGNPSHTGVDDLEREYPQDLLSRMLLYHYASDADGDVLRARGHRVAVPGQYLAL ANPTAATVP >Mature_249_residues MDWALRVQGVGNASAVALGSPMATLERAGVPWLTIDCGSEGLTAYQAHYGQLPQAIFITHVHLDHVGGLERVFVDSYFSE RRGRTRLYVPAPVVPLLQRRIADYPNVLAEGGANFWDAFQLVPVGDAFWHDGVRLEVFPVRHHWPETAYGLRLKGALVWT GDTRPIPEMLKRYADDSELIAHDCGVHGNPSHTGVDDLEREYPQDLLSRMLLYHYASDADGDVLRARGHRVAVPGQYLAL ANPTAATVP
Specific function: Unknown
COG id: COG1234
COG function: function code R; Metal-dependent hydrolases of the beta-lactamase superfamily III
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27540; Mature: 27540
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDWALRVQGVGNASAVALGSPMATLERAGVPWLTIDCGSEGLTAYQAHYGQLPQAIFITH CCCEEEEECCCCCCEEECCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCCCEEEEEE VHLDHVGGLERVFVDSYFSERRGRTRLYVPAPVVPLLQRRIADYPNVLAEGGANFWDAFQ EEHHHCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCHHHHHCCCCHHHHEE LVPVGDAFWHDGVRLEVFPVRHHWPETAYGLRLKGALVWTGDTRPIPEMLKRYADDSELI EEECCHHHHCCCEEEEEEECCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHCCCCHHH AHDCGVHGNPSHTGVDDLEREYPQDLLSRMLLYHYASDADGDVLRARGHRVAVPGQYLAL HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHCCCEEECCCCEEEE ANPTAATVP CCCCCCCCC >Mature Secondary Structure MDWALRVQGVGNASAVALGSPMATLERAGVPWLTIDCGSEGLTAYQAHYGQLPQAIFITH CCCEEEEECCCCCCEEECCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCCCEEEEEE VHLDHVGGLERVFVDSYFSERRGRTRLYVPAPVVPLLQRRIADYPNVLAEGGANFWDAFQ EEHHHCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHCCCHHHHHCCCCHHHHEE LVPVGDAFWHDGVRLEVFPVRHHWPETAYGLRLKGALVWTGDTRPIPEMLKRYADDSELI EEECCHHHHCCCEEEEEEECCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHCCCCHHH AHDCGVHGNPSHTGVDDLEREYPQDLLSRMLLYHYASDADGDVLRARGHRVAVPGQYLAL HHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHCCCEEECCCCEEEE ANPTAATVP CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA