Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

Click here to switch to the map view.

The map label for this gene is 84622606

Identifier: 84622606

GI number: 84622606

Start: 1038278

End: 1039975

Strand: Direct

Name: 84622606

Synonym: XOO_0949

Alternate gene names: NA

Gene position: 1038278-1039975 (Clockwise)

Preceding gene: 84622605

Following gene: 84622607

Centisome position: 21.02

GC content: 60.78

Gene sequence:

>1698_bases
ATGAGCGCGTCGCAACGGCCCGGAATCACGCCCTATGCGCTGGTATGGCTCGGTACGCTGCTGGCCTGGGTGGCGCTGAT
CCTTTTCATCTACTATCGCCAATGGCAGTCAACAGGCGTGGAGGATTCCGGCTTGGGCAACGATATTCGTAATGGTGTAT
TGGCGATCACCGCTCTGGTGGGCCTGGCCTTTGGAGGGCATTGGCTGTGGAAGGTGCGCAGCGCGGTGGCTAAGGACCCA
GCTGCGATGGCAAGCGCCCAGGCCACGACGGCGGCGGCCGCGACCCCGCGTGGGCGCATGCTGGCTGGTGAGGGGGAGCG
CTACGTGCTGGAGGTGCGCGGGCTTGGCTTGGCGGTAGATCGCTATTACCAGGAGGACACGTGGAGGTTGTTCAAGGACA
AGGACGACAACTACCTCTCAGTGCTGTCGAAAGATCCTAAAGACTACGACCCCAATACGCGAATCGGCGATGCGACGATT
GCGGCTAATGCTTCTTTCGGTTACGCGGCGAAGAACGCGGTGGAGCGTTGGCCGCTGCCAGTGATCATCATCGGGCCACC
AAAGACGATTGATGATGGAAGTTCAATGGCGCATGCGATTGCTTACAAACGCCAAGCCGCAAGCCTCGGGTTGACTCTTT
TTCTCTGGCAGGAGGATGACAACACAGCCAGTGCCCAGGCAACCCTCGAAAAGCTTTTTCGTTTCTTCGATGAGCATCCC
GATGTGCCGGAGGTCTTGCTGGTCACGCAGGATGGAGAAGGTCCGCGCTATCGCTGGAAGTCGCCAGGGATGCCCGACAA
ACGGCCTGAAGCGCCTCACGTTCCGCTACTACCCGACAGCATGACTGCGCTATTGGTGGCACGCAGCGATCGGGTGGACA
GGTTGGTGCGCCCGTATGCCGTCGATGTAGACGATGGCATCAATAAGGACGATACGCAGTACGACATCATCAAGTTGTGG
AATTTTTTCTGGGATAAATCCGATTCGCAAGAGGAAGGCAGCTTCGATGCGTATTACCGCAAGCTGGCAGCCGAGAAGCA
TTACGCCTCGGACTATCCCCCCGGCACCATGAAGGCCGATTGGTGGATTGCGCAACTGCCCGAGTTGTGGAAGCAGATCA
ACAACAAGGGGCCGGGTGAGTTCAAGCCCAGCCCGTATCTGCCGGTGCGCTGGGCGCGCTGGCAGGTGCAGCAGTTCGAC
GAATCTCCGTTGCTGGGCTATCTGCATCGCCCGGTGCATGTGCCCCTGACCGACGAACAGGGCAAGCCACTCAAGCGTGC
CGGGCAGGTGGAGGCGCTGCGCAAGGGCTGGGCCCAGGCCGTGTCGGCCCTACCGGAAGATGCCAAGCCCACGCGCGTGT
TCTACGACACCAGCCTGGATCGCGAATGGGTCATTCCCCTGACGCAAGCGCTGCACGGCAACGCCGAGGGCATCGAACTG
GACGACAAGCACGAGGGCTACGACATCGGTCGGCGGCTGGGCAATACCGGCGTCAGTTCCGCGCTAGTGCAGATCGCGCT
GGGCATCGTCTCCGGTTACGACGATGGCCGCACCAGTGCCACCGTCAACCTGACCCCGGATGGCTATGCGGGCATCGTAA
TGGTCAGCCCGCCCGACGAAGCCAGCAAAGCGGCCGCAATCCAGCACGGGAAGCATCCGTTCTACGACCTCTTGCGCGAC
AAGAAGGCCACACCATGA

Upstream 100 bases:

>100_bases
ATTACGAGAAAGGCGTCTTTCCCGCAGGCTTGGTGTCGAGTTCGCCCCCGTCAAAGTATGTGGAGAGCAGGACCCGCGCG
CAACGTGCGGAGAGCAGCGA

Downstream 100 bases:

>100_bases
GCCGCGCATTCATCGTCGAAGGCGACGCCCACAGCCACGGCGGCCATGTGCTGGCCGGTTCCGAACACGCAGGCATCGAT
GGCCAGGCGTTTGCGTGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 565; Mature: 564

Protein sequence:

>565_residues
MSASQRPGITPYALVWLGTLLAWVALILFIYYRQWQSTGVEDSGLGNDIRNGVLAITALVGLAFGGHWLWKVRSAVAKDP
AAMASAQATTAAAATPRGRMLAGEGERYVLEVRGLGLAVDRYYQEDTWRLFKDKDDNYLSVLSKDPKDYDPNTRIGDATI
AANASFGYAAKNAVERWPLPVIIIGPPKTIDDGSSMAHAIAYKRQAASLGLTLFLWQEDDNTASAQATLEKLFRFFDEHP
DVPEVLLVTQDGEGPRYRWKSPGMPDKRPEAPHVPLLPDSMTALLVARSDRVDRLVRPYAVDVDDGINKDDTQYDIIKLW
NFFWDKSDSQEEGSFDAYYRKLAAEKHYASDYPPGTMKADWWIAQLPELWKQINNKGPGEFKPSPYLPVRWARWQVQQFD
ESPLLGYLHRPVHVPLTDEQGKPLKRAGQVEALRKGWAQAVSALPEDAKPTRVFYDTSLDREWVIPLTQALHGNAEGIEL
DDKHEGYDIGRRLGNTGVSSALVQIALGIVSGYDDGRTSATVNLTPDGYAGIVMVSPPDEASKAAAIQHGKHPFYDLLRD
KKATP

Sequences:

>Translated_565_residues
MSASQRPGITPYALVWLGTLLAWVALILFIYYRQWQSTGVEDSGLGNDIRNGVLAITALVGLAFGGHWLWKVRSAVAKDP
AAMASAQATTAAAATPRGRMLAGEGERYVLEVRGLGLAVDRYYQEDTWRLFKDKDDNYLSVLSKDPKDYDPNTRIGDATI
AANASFGYAAKNAVERWPLPVIIIGPPKTIDDGSSMAHAIAYKRQAASLGLTLFLWQEDDNTASAQATLEKLFRFFDEHP
DVPEVLLVTQDGEGPRYRWKSPGMPDKRPEAPHVPLLPDSMTALLVARSDRVDRLVRPYAVDVDDGINKDDTQYDIIKLW
NFFWDKSDSQEEGSFDAYYRKLAAEKHYASDYPPGTMKADWWIAQLPELWKQINNKGPGEFKPSPYLPVRWARWQVQQFD
ESPLLGYLHRPVHVPLTDEQGKPLKRAGQVEALRKGWAQAVSALPEDAKPTRVFYDTSLDREWVIPLTQALHGNAEGIEL
DDKHEGYDIGRRLGNTGVSSALVQIALGIVSGYDDGRTSATVNLTPDGYAGIVMVSPPDEASKAAAIQHGKHPFYDLLRD
KKATP
>Mature_564_residues
SASQRPGITPYALVWLGTLLAWVALILFIYYRQWQSTGVEDSGLGNDIRNGVLAITALVGLAFGGHWLWKVRSAVAKDPA
AMASAQATTAAAATPRGRMLAGEGERYVLEVRGLGLAVDRYYQEDTWRLFKDKDDNYLSVLSKDPKDYDPNTRIGDATIA
ANASFGYAAKNAVERWPLPVIIIGPPKTIDDGSSMAHAIAYKRQAASLGLTLFLWQEDDNTASAQATLEKLFRFFDEHPD
VPEVLLVTQDGEGPRYRWKSPGMPDKRPEAPHVPLLPDSMTALLVARSDRVDRLVRPYAVDVDDGINKDDTQYDIIKLWN
FFWDKSDSQEEGSFDAYYRKLAAEKHYASDYPPGTMKADWWIAQLPELWKQINNKGPGEFKPSPYLPVRWARWQVQQFDE
SPLLGYLHRPVHVPLTDEQGKPLKRAGQVEALRKGWAQAVSALPEDAKPTRVFYDTSLDREWVIPLTQALHGNAEGIELD
DKHEGYDIGRRLGNTGVSSALVQIALGIVSGYDDGRTSATVNLTPDGYAGIVMVSPPDEASKAAAIQHGKHPFYDLLRDK
KATP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62805; Mature: 62674

Theoretical pI: Translated: 5.68; Mature: 5.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSASQRPGITPYALVWLGTLLAWVALILFIYYRQWQSTGVEDSGLGNDIRNGVLAITALV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
GLAFGGHWLWKVRSAVAKDPAAMASAQATTAAAATPRGRMLAGEGERYVLEVRGLGLAVD
HHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEECCCCEEEEEEECCCEEHH
RYYQEDTWRLFKDKDDNYLSVLSKDPKDYDPNTRIGDATIAANASFGYAAKNAVERWPLP
HHHHHHHHHHHCCCCCCEEEHCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCC
VIIIGPPKTIDDGSSMAHAIAYKRQAASLGLTLFLWQEDDNTASAQATLEKLFRFFDEHP
EEEECCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCC
DVPEVLLVTQDGEGPRYRWKSPGMPDKRPEAPHVPLLPDSMTALLVARSDRVDRLVRPYA
CCCCEEEEEECCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHEEEECCCHHHHHHHCCEE
VDVDDGINKDDTQYDIIKLWNFFWDKSDSQEEGSFDAYYRKLAAEKHYASDYPPGTMKAD
EECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
WWIAQLPELWKQINNKGPGEFKPSPYLPVRWARWQVQQFDESPLLGYLHRPVHVPLTDEQ
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHCCCEEECCCCCC
GKPLKRAGQVEALRKGWAQAVSALPEDAKPTRVFYDTSLDREWVIPLTQALHGNAEGIEL
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEHHHHHHHCCCCCCCCC
DDKHEGYDIGRRLGNTGVSSALVQIALGIVSGYDDGRTSATVNLTPDGYAGIVMVSPPDE
CCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEEECCCCC
ASKAAAIQHGKHPFYDLLRDKKATP
HHHHHHHHCCCCHHHHHHHHCCCCC
>Mature Secondary Structure 
SASQRPGITPYALVWLGTLLAWVALILFIYYRQWQSTGVEDSGLGNDIRNGVLAITALV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH
GLAFGGHWLWKVRSAVAKDPAAMASAQATTAAAATPRGRMLAGEGERYVLEVRGLGLAVD
HHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEECCCCEEEEEEECCCEEHH
RYYQEDTWRLFKDKDDNYLSVLSKDPKDYDPNTRIGDATIAANASFGYAAKNAVERWPLP
HHHHHHHHHHHCCCCCCEEEHCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCC
VIIIGPPKTIDDGSSMAHAIAYKRQAASLGLTLFLWQEDDNTASAQATLEKLFRFFDEHP
EEEECCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCC
DVPEVLLVTQDGEGPRYRWKSPGMPDKRPEAPHVPLLPDSMTALLVARSDRVDRLVRPYA
CCCCEEEEEECCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHEEEECCCHHHHHHHCCEE
VDVDDGINKDDTQYDIIKLWNFFWDKSDSQEEGSFDAYYRKLAAEKHYASDYPPGTMKAD
EECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
WWIAQLPELWKQINNKGPGEFKPSPYLPVRWARWQVQQFDESPLLGYLHRPVHVPLTDEQ
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHCCCEEECCCCCC
GKPLKRAGQVEALRKGWAQAVSALPEDAKPTRVFYDTSLDREWVIPLTQALHGNAEGIEL
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEHHHHHHHCCCCCCCCC
DDKHEGYDIGRRLGNTGVSSALVQIALGIVSGYDDGRTSATVNLTPDGYAGIVMVSPPDE
CCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEEECCCCC
ASKAAAIQHGKHPFYDLLRDKKATP
HHHHHHHHCCCCHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA