Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84622606
Identifier: 84622606
GI number: 84622606
Start: 1038278
End: 1039975
Strand: Direct
Name: 84622606
Synonym: XOO_0949
Alternate gene names: NA
Gene position: 1038278-1039975 (Clockwise)
Preceding gene: 84622605
Following gene: 84622607
Centisome position: 21.02
GC content: 60.78
Gene sequence:
>1698_bases ATGAGCGCGTCGCAACGGCCCGGAATCACGCCCTATGCGCTGGTATGGCTCGGTACGCTGCTGGCCTGGGTGGCGCTGAT CCTTTTCATCTACTATCGCCAATGGCAGTCAACAGGCGTGGAGGATTCCGGCTTGGGCAACGATATTCGTAATGGTGTAT TGGCGATCACCGCTCTGGTGGGCCTGGCCTTTGGAGGGCATTGGCTGTGGAAGGTGCGCAGCGCGGTGGCTAAGGACCCA GCTGCGATGGCAAGCGCCCAGGCCACGACGGCGGCGGCCGCGACCCCGCGTGGGCGCATGCTGGCTGGTGAGGGGGAGCG CTACGTGCTGGAGGTGCGCGGGCTTGGCTTGGCGGTAGATCGCTATTACCAGGAGGACACGTGGAGGTTGTTCAAGGACA AGGACGACAACTACCTCTCAGTGCTGTCGAAAGATCCTAAAGACTACGACCCCAATACGCGAATCGGCGATGCGACGATT GCGGCTAATGCTTCTTTCGGTTACGCGGCGAAGAACGCGGTGGAGCGTTGGCCGCTGCCAGTGATCATCATCGGGCCACC AAAGACGATTGATGATGGAAGTTCAATGGCGCATGCGATTGCTTACAAACGCCAAGCCGCAAGCCTCGGGTTGACTCTTT TTCTCTGGCAGGAGGATGACAACACAGCCAGTGCCCAGGCAACCCTCGAAAAGCTTTTTCGTTTCTTCGATGAGCATCCC GATGTGCCGGAGGTCTTGCTGGTCACGCAGGATGGAGAAGGTCCGCGCTATCGCTGGAAGTCGCCAGGGATGCCCGACAA ACGGCCTGAAGCGCCTCACGTTCCGCTACTACCCGACAGCATGACTGCGCTATTGGTGGCACGCAGCGATCGGGTGGACA GGTTGGTGCGCCCGTATGCCGTCGATGTAGACGATGGCATCAATAAGGACGATACGCAGTACGACATCATCAAGTTGTGG AATTTTTTCTGGGATAAATCCGATTCGCAAGAGGAAGGCAGCTTCGATGCGTATTACCGCAAGCTGGCAGCCGAGAAGCA TTACGCCTCGGACTATCCCCCCGGCACCATGAAGGCCGATTGGTGGATTGCGCAACTGCCCGAGTTGTGGAAGCAGATCA ACAACAAGGGGCCGGGTGAGTTCAAGCCCAGCCCGTATCTGCCGGTGCGCTGGGCGCGCTGGCAGGTGCAGCAGTTCGAC GAATCTCCGTTGCTGGGCTATCTGCATCGCCCGGTGCATGTGCCCCTGACCGACGAACAGGGCAAGCCACTCAAGCGTGC CGGGCAGGTGGAGGCGCTGCGCAAGGGCTGGGCCCAGGCCGTGTCGGCCCTACCGGAAGATGCCAAGCCCACGCGCGTGT TCTACGACACCAGCCTGGATCGCGAATGGGTCATTCCCCTGACGCAAGCGCTGCACGGCAACGCCGAGGGCATCGAACTG GACGACAAGCACGAGGGCTACGACATCGGTCGGCGGCTGGGCAATACCGGCGTCAGTTCCGCGCTAGTGCAGATCGCGCT GGGCATCGTCTCCGGTTACGACGATGGCCGCACCAGTGCCACCGTCAACCTGACCCCGGATGGCTATGCGGGCATCGTAA TGGTCAGCCCGCCCGACGAAGCCAGCAAAGCGGCCGCAATCCAGCACGGGAAGCATCCGTTCTACGACCTCTTGCGCGAC AAGAAGGCCACACCATGA
Upstream 100 bases:
>100_bases ATTACGAGAAAGGCGTCTTTCCCGCAGGCTTGGTGTCGAGTTCGCCCCCGTCAAAGTATGTGGAGAGCAGGACCCGCGCG CAACGTGCGGAGAGCAGCGA
Downstream 100 bases:
>100_bases GCCGCGCATTCATCGTCGAAGGCGACGCCCACAGCCACGGCGGCCATGTGCTGGCCGGTTCCGAACACGCAGGCATCGAT GGCCAGGCGTTTGCGTGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 565; Mature: 564
Protein sequence:
>565_residues MSASQRPGITPYALVWLGTLLAWVALILFIYYRQWQSTGVEDSGLGNDIRNGVLAITALVGLAFGGHWLWKVRSAVAKDP AAMASAQATTAAAATPRGRMLAGEGERYVLEVRGLGLAVDRYYQEDTWRLFKDKDDNYLSVLSKDPKDYDPNTRIGDATI AANASFGYAAKNAVERWPLPVIIIGPPKTIDDGSSMAHAIAYKRQAASLGLTLFLWQEDDNTASAQATLEKLFRFFDEHP DVPEVLLVTQDGEGPRYRWKSPGMPDKRPEAPHVPLLPDSMTALLVARSDRVDRLVRPYAVDVDDGINKDDTQYDIIKLW NFFWDKSDSQEEGSFDAYYRKLAAEKHYASDYPPGTMKADWWIAQLPELWKQINNKGPGEFKPSPYLPVRWARWQVQQFD ESPLLGYLHRPVHVPLTDEQGKPLKRAGQVEALRKGWAQAVSALPEDAKPTRVFYDTSLDREWVIPLTQALHGNAEGIEL DDKHEGYDIGRRLGNTGVSSALVQIALGIVSGYDDGRTSATVNLTPDGYAGIVMVSPPDEASKAAAIQHGKHPFYDLLRD KKATP
Sequences:
>Translated_565_residues MSASQRPGITPYALVWLGTLLAWVALILFIYYRQWQSTGVEDSGLGNDIRNGVLAITALVGLAFGGHWLWKVRSAVAKDP AAMASAQATTAAAATPRGRMLAGEGERYVLEVRGLGLAVDRYYQEDTWRLFKDKDDNYLSVLSKDPKDYDPNTRIGDATI AANASFGYAAKNAVERWPLPVIIIGPPKTIDDGSSMAHAIAYKRQAASLGLTLFLWQEDDNTASAQATLEKLFRFFDEHP DVPEVLLVTQDGEGPRYRWKSPGMPDKRPEAPHVPLLPDSMTALLVARSDRVDRLVRPYAVDVDDGINKDDTQYDIIKLW NFFWDKSDSQEEGSFDAYYRKLAAEKHYASDYPPGTMKADWWIAQLPELWKQINNKGPGEFKPSPYLPVRWARWQVQQFD ESPLLGYLHRPVHVPLTDEQGKPLKRAGQVEALRKGWAQAVSALPEDAKPTRVFYDTSLDREWVIPLTQALHGNAEGIEL DDKHEGYDIGRRLGNTGVSSALVQIALGIVSGYDDGRTSATVNLTPDGYAGIVMVSPPDEASKAAAIQHGKHPFYDLLRD KKATP >Mature_564_residues SASQRPGITPYALVWLGTLLAWVALILFIYYRQWQSTGVEDSGLGNDIRNGVLAITALVGLAFGGHWLWKVRSAVAKDPA AMASAQATTAAAATPRGRMLAGEGERYVLEVRGLGLAVDRYYQEDTWRLFKDKDDNYLSVLSKDPKDYDPNTRIGDATIA ANASFGYAAKNAVERWPLPVIIIGPPKTIDDGSSMAHAIAYKRQAASLGLTLFLWQEDDNTASAQATLEKLFRFFDEHPD VPEVLLVTQDGEGPRYRWKSPGMPDKRPEAPHVPLLPDSMTALLVARSDRVDRLVRPYAVDVDDGINKDDTQYDIIKLWN FFWDKSDSQEEGSFDAYYRKLAAEKHYASDYPPGTMKADWWIAQLPELWKQINNKGPGEFKPSPYLPVRWARWQVQQFDE SPLLGYLHRPVHVPLTDEQGKPLKRAGQVEALRKGWAQAVSALPEDAKPTRVFYDTSLDREWVIPLTQALHGNAEGIELD DKHEGYDIGRRLGNTGVSSALVQIALGIVSGYDDGRTSATVNLTPDGYAGIVMVSPPDEASKAAAIQHGKHPFYDLLRDK KATP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62805; Mature: 62674
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSASQRPGITPYALVWLGTLLAWVALILFIYYRQWQSTGVEDSGLGNDIRNGVLAITALV CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH GLAFGGHWLWKVRSAVAKDPAAMASAQATTAAAATPRGRMLAGEGERYVLEVRGLGLAVD HHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEECCCCEEEEEEECCCEEHH RYYQEDTWRLFKDKDDNYLSVLSKDPKDYDPNTRIGDATIAANASFGYAAKNAVERWPLP HHHHHHHHHHHCCCCCCEEEHCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCC VIIIGPPKTIDDGSSMAHAIAYKRQAASLGLTLFLWQEDDNTASAQATLEKLFRFFDEHP EEEECCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCC DVPEVLLVTQDGEGPRYRWKSPGMPDKRPEAPHVPLLPDSMTALLVARSDRVDRLVRPYA CCCCEEEEEECCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHEEEECCCHHHHHHHCCEE VDVDDGINKDDTQYDIIKLWNFFWDKSDSQEEGSFDAYYRKLAAEKHYASDYPPGTMKAD EECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC WWIAQLPELWKQINNKGPGEFKPSPYLPVRWARWQVQQFDESPLLGYLHRPVHVPLTDEQ HHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHCCCEEECCCCCC GKPLKRAGQVEALRKGWAQAVSALPEDAKPTRVFYDTSLDREWVIPLTQALHGNAEGIEL CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEHHHHHHHCCCCCCCCC DDKHEGYDIGRRLGNTGVSSALVQIALGIVSGYDDGRTSATVNLTPDGYAGIVMVSPPDE CCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEEECCCCC ASKAAAIQHGKHPFYDLLRDKKATP HHHHHHHHCCCCHHHHHHHHCCCCC >Mature Secondary Structure SASQRPGITPYALVWLGTLLAWVALILFIYYRQWQSTGVEDSGLGNDIRNGVLAITALV CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHH GLAFGGHWLWKVRSAVAKDPAAMASAQATTAAAATPRGRMLAGEGERYVLEVRGLGLAVD HHHHCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCEEECCCCEEEEEEECCCEEHH RYYQEDTWRLFKDKDDNYLSVLSKDPKDYDPNTRIGDATIAANASFGYAAKNAVERWPLP HHHHHHHHHHHCCCCCCEEEHCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCC VIIIGPPKTIDDGSSMAHAIAYKRQAASLGLTLFLWQEDDNTASAQATLEKLFRFFDEHP EEEECCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCHHHHHHHHHHHHHHHCCC DVPEVLLVTQDGEGPRYRWKSPGMPDKRPEAPHVPLLPDSMTALLVARSDRVDRLVRPYA CCCCEEEEEECCCCCCEECCCCCCCCCCCCCCCCCCCCCHHHEEEECCCHHHHHHHCCEE VDVDDGINKDDTQYDIIKLWNFFWDKSDSQEEGSFDAYYRKLAAEKHYASDYPPGTMKAD EECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC WWIAQLPELWKQINNKGPGEFKPSPYLPVRWARWQVQQFDESPLLGYLHRPVHVPLTDEQ HHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHCCCEEECCCCCC GKPLKRAGQVEALRKGWAQAVSALPEDAKPTRVFYDTSLDREWVIPLTQALHGNAEGIEL CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEHHHHHHHCCCCCCCCC DDKHEGYDIGRRLGNTGVSSALVQIALGIVSGYDDGRTSATVNLTPDGYAGIVMVSPPDE CCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCEEEEEECCCCC ASKAAAIQHGKHPFYDLLRDKKATP HHHHHHHHCCCCHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA