Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84622605
Identifier: 84622605
GI number: 84622605
Start: 1036131
End: 1038281
Strand: Direct
Name: 84622605
Synonym: XOO_0948
Alternate gene names: NA
Gene position: 1036131-1038281 (Clockwise)
Preceding gene: 84622604
Following gene: 84622606
Centisome position: 20.97
GC content: 63.97
Gene sequence:
>2151_bases ATGACCGATTCCGCTCCCCATGTCGTCGCCCAAGCCGATGCACTGCTGCTCCCCAATCGGATGGGCAACCGTCCGGTGCA GGTGCCCGCGGACCGGCCGGGCATCGTGATCTTCATCCACGGCGTCAACGACCCCGGCGCCGGCTATCCCACCGTGGAAA GGGGACTGTGCCAGGCCTTCAACGAGCGGCTGAGTCGTATCGATCTGCGCGCCGGGCAGTATGGGGTCAAGTATGCCGAA GCCAAGAAATCGCCAGTGAAGCCAGGCGAGCAGGGCTACAAGGAAGTGGCGTCGGTCAAATACGACCCGGACACCTACCT GTATCAGCGCAGCGAAGACACCACCAGCAAGTTGCCGACCCACAGCATGTTCATCCCGTTCTATTGGGGCTACCGCGCCA GCAACAACGAGATCGCCAAGGACAAGCGCGGCAATCCGACGCGCCTGCGCAGCCAGTACCAGGACACCGCCGGCAACCGG CTGGATGCCCATTTCGCCAAGGCGGGCGGGTTCTTCGTCAACGCCACCAGCAACCTGCCGGACATGTATGGCAAAGGCTT CGAGACAACGTTGAAGACCAGGGGTGTGCAGATGGTGTCGCCGGACTTCACCTACTTCGGCAACGCACCGCCACGGCGCT ATTTCGTGCTGGCGGCCGAACGGCTGGCGATGCTGGTGAGCGAGATCCGCCGGCTGGCCCCGGACGACACCATCACCATC ATGGGCCACAGCCAGGGCACGATGATCACCCTGCTGGCACAGGCCATGCTGGCCGACCGTCGCCAGCGCTGCGCGGACTG CCTGATCCTGGTGGACAGCCCCTACAGCCTGCTCGAACCCGAGGGCGAGGAGCAGACCACCCAGGCCAAGCTGCAGACGC TCATCAATATCGTCAACGCAGTGACCACCAAGCCGTACGCCCGCCCATCATTGAGCGAGCTGCAAGTGGGTCAGCCAGGA TATGGTGGCCGCACCGGACATGGATGGACCCCTAGCCAGGGCACCCGTCTGGACGCGGAAGGCAAGCAGATCGTCTTCGC CGAGCGCGACAACCGCGGCAAGGTGTACCTGTACTTCTGCCCACAGGACACCACGGTGGCGCTGGATCAGGTGCAGGGCA TCGGCACCTACGGCGTGCCGGACACGGTGCACGTGGCGTGGAAGCGGAAGTTCTACAGCACCGAGCGCACCGCCAGCTTG CCGGCGATGGACGCGCTCAAGGACATGCGCTTCCACCAGCGGATGTGGACCAAGCTGCTGCGCGGCGGCAAGCCGGTTGC CGTGGGCCTGCCGCCGCGGCACATCCCGCTGCGCATGGAGGATGAGGCGCGTTACCCAGGCGGGGGTGTGGGCCCCACGA CCACGGCCAGCCAGACGCCCTTGCCGCAGGAGGGGCGCTACATCAACGGCGAGGCGCTGCAACCGCCGCATGCACCACAG ATGGAGGATGGGGAAGCCGACGTGCGCCAGTACAAGAGCAGCACGCCGCTGCGCGGCACGCCGACCCGTGCCGGCAAGGA TGCGCCGGACGATGTGTCGGTGGACGTGGCCCTGGGCAACCCGGCGGCGAAGTTGCGCCAGTACATGATCTTGGTCAGCA TCGAGCAAGAGGAGGTGCCGGAGTCCAAACTGGCGGAGATGACCAGCGAGTTCAATGCGCAGCATCCGGACATCAACGAC CAGACACCCGGTTACACATGCGATGCGACCGATATGGGTTGTACGGTGTGGCGACATGCCACACCCAACGAGGTACGTGC GCAGATGACTCACAACCCCGCGGCGCTGACCGACAATTCCTACCACTCGGCGATGCTGCGCAGTACCGAGAACCACCGCT GGGTGACGGCCATGGACGTGGCGATCGGGCAGGCGCAGACCTTGGATGATCCGGAGTGGCGCAAGGTGCTGATCGCCTTT GCCAACTGGCGCACGCCGTTTATGCCGTCGGAAGACCAACCCGCTGGTCAAGTAAGTATCAGCGAGCTTGCGAATTTCAA GAAGCTCAGCCCTGGAGCGAGAAAATTGGTTGAAGCGAGTTGTTTCTATTACGAGAAAGGCGTCTTTCCCGCAGGCTTGG TGTCGAGTTCGCCCCCGTCAAAGTATGTGGAGAGCAGGACCCGCGCGCAACGTGCGGAGAGCAGCGAATGA
Upstream 100 bases:
>100_bases GAGGTCCACAAGCCGCCGCTGGGCGGCGGCTGACACTCCTCCCGCGTGTGCGGCGCTGCTTGCCACGCGCTCCCCGATAT TCATGCCGCAGGAAGCCTGT
Downstream 100 bases:
>100_bases GCGCGTCGCAACGGCCCGGAATCACGCCCTATGCGCTGGTATGGCTCGGTACGCTGCTGGCCTGGGTGGCGCTGATCCTT TTCATCTACTATCGCCAATG
Product: hypothetical protein
Products: NA
Alternate protein names: Type V Secretory Pathway Adhesin AidA; Ribonuclease G And E
Number of amino acids: Translated: 716; Mature: 715
Protein sequence:
>716_residues MTDSAPHVVAQADALLLPNRMGNRPVQVPADRPGIVIFIHGVNDPGAGYPTVERGLCQAFNERLSRIDLRAGQYGVKYAE AKKSPVKPGEQGYKEVASVKYDPDTYLYQRSEDTTSKLPTHSMFIPFYWGYRASNNEIAKDKRGNPTRLRSQYQDTAGNR LDAHFAKAGGFFVNATSNLPDMYGKGFETTLKTRGVQMVSPDFTYFGNAPPRRYFVLAAERLAMLVSEIRRLAPDDTITI MGHSQGTMITLLAQAMLADRRQRCADCLILVDSPYSLLEPEGEEQTTQAKLQTLINIVNAVTTKPYARPSLSELQVGQPG YGGRTGHGWTPSQGTRLDAEGKQIVFAERDNRGKVYLYFCPQDTTVALDQVQGIGTYGVPDTVHVAWKRKFYSTERTASL PAMDALKDMRFHQRMWTKLLRGGKPVAVGLPPRHIPLRMEDEARYPGGGVGPTTTASQTPLPQEGRYINGEALQPPHAPQ MEDGEADVRQYKSSTPLRGTPTRAGKDAPDDVSVDVALGNPAAKLRQYMILVSIEQEEVPESKLAEMTSEFNAQHPDIND QTPGYTCDATDMGCTVWRHATPNEVRAQMTHNPAALTDNSYHSAMLRSTENHRWVTAMDVAIGQAQTLDDPEWRKVLIAF ANWRTPFMPSEDQPAGQVSISELANFKKLSPGARKLVEASCFYYEKGVFPAGLVSSSPPSKYVESRTRAQRAESSE
Sequences:
>Translated_716_residues MTDSAPHVVAQADALLLPNRMGNRPVQVPADRPGIVIFIHGVNDPGAGYPTVERGLCQAFNERLSRIDLRAGQYGVKYAE AKKSPVKPGEQGYKEVASVKYDPDTYLYQRSEDTTSKLPTHSMFIPFYWGYRASNNEIAKDKRGNPTRLRSQYQDTAGNR LDAHFAKAGGFFVNATSNLPDMYGKGFETTLKTRGVQMVSPDFTYFGNAPPRRYFVLAAERLAMLVSEIRRLAPDDTITI MGHSQGTMITLLAQAMLADRRQRCADCLILVDSPYSLLEPEGEEQTTQAKLQTLINIVNAVTTKPYARPSLSELQVGQPG YGGRTGHGWTPSQGTRLDAEGKQIVFAERDNRGKVYLYFCPQDTTVALDQVQGIGTYGVPDTVHVAWKRKFYSTERTASL PAMDALKDMRFHQRMWTKLLRGGKPVAVGLPPRHIPLRMEDEARYPGGGVGPTTTASQTPLPQEGRYINGEALQPPHAPQ MEDGEADVRQYKSSTPLRGTPTRAGKDAPDDVSVDVALGNPAAKLRQYMILVSIEQEEVPESKLAEMTSEFNAQHPDIND QTPGYTCDATDMGCTVWRHATPNEVRAQMTHNPAALTDNSYHSAMLRSTENHRWVTAMDVAIGQAQTLDDPEWRKVLIAF ANWRTPFMPSEDQPAGQVSISELANFKKLSPGARKLVEASCFYYEKGVFPAGLVSSSPPSKYVESRTRAQRAESSE >Mature_715_residues TDSAPHVVAQADALLLPNRMGNRPVQVPADRPGIVIFIHGVNDPGAGYPTVERGLCQAFNERLSRIDLRAGQYGVKYAEA KKSPVKPGEQGYKEVASVKYDPDTYLYQRSEDTTSKLPTHSMFIPFYWGYRASNNEIAKDKRGNPTRLRSQYQDTAGNRL DAHFAKAGGFFVNATSNLPDMYGKGFETTLKTRGVQMVSPDFTYFGNAPPRRYFVLAAERLAMLVSEIRRLAPDDTITIM GHSQGTMITLLAQAMLADRRQRCADCLILVDSPYSLLEPEGEEQTTQAKLQTLINIVNAVTTKPYARPSLSELQVGQPGY GGRTGHGWTPSQGTRLDAEGKQIVFAERDNRGKVYLYFCPQDTTVALDQVQGIGTYGVPDTVHVAWKRKFYSTERTASLP AMDALKDMRFHQRMWTKLLRGGKPVAVGLPPRHIPLRMEDEARYPGGGVGPTTTASQTPLPQEGRYINGEALQPPHAPQM EDGEADVRQYKSSTPLRGTPTRAGKDAPDDVSVDVALGNPAAKLRQYMILVSIEQEEVPESKLAEMTSEFNAQHPDINDQ TPGYTCDATDMGCTVWRHATPNEVRAQMTHNPAALTDNSYHSAMLRSTENHRWVTAMDVAIGQAQTLDDPEWRKVLIAFA NWRTPFMPSEDQPAGQVSISELANFKKLSPGARKLVEASCFYYEKGVFPAGLVSSSPPSKYVESRTRAQRAESSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 79243; Mature: 79112
Theoretical pI: Translated: 7.63; Mature: 7.63
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDSAPHVVAQADALLLPNRMGNRPVQVPADRPGIVIFIHGVNDPGAGYPTVERGLCQAF CCCCCCCHHHCCCCEECCCCCCCCCEECCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHH NERLSRIDLRAGQYGVKYAEAKKSPVKPGEQGYKEVASVKYDPDTYLYQRSEDTTSKLPT HHHHHHHHHCCCCCCCCHHHCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCHHHHCCC HSMFIPFYWGYRASNNEIAKDKRGNPTRLRSQYQDTAGNRLDAHFAKAGGFFVNATSNLP CEEEEEEEECEECCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCEEEEECCCCC DMYGKGFETTLKTRGVQMVSPDFTYFGNAPPRRYFVLAAERLAMLVSEIRRLAPDDTITI HHHCCCCHHHHHHCCEEEECCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCEEEE MGHSQGTMITLLAQAMLADRRQRCADCLILVDSPYSLLEPEGEEQTTQAKLQTLINIVNA EECCCCHHHHHHHHHHHHHHHHHHCEEEEEECCCHHHHCCCCCHHHHHHHHHHHHHHHHH VTTKPYARPSLSELQVGQPGYGGRTGHGWTPSQGTRLDAEGKQIVFAERDNRGKVYLYFC HHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEEECCCCEEEEEEC PQDTTVALDQVQGIGTYGVPDTVHVAWKRKFYSTERTASLPAMDALKDMRFHQRMWTKLL CCCCEEHHHHHCCCCCCCCCCCEEHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH RGGKPVAVGLPPRHIPLRMEDEARYPGGGVGPTTTASQTPLPQEGRYINGEALQPPHAPQ CCCCCEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCC MEDGEADVRQYKSSTPLRGTPTRAGKDAPDDVSVDVALGNPAAKLRQYMILVSIEQEEVP CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHEEEEEEEECHHHCC ESKLAEMTSEFNAQHPDINDQTPGYTCDATDMGCTVWRHATPNEVRAQMTHNPAALTDNS HHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCEEEECCCCHHHHHHHCCCCCCCCCCC YHSAMLRSTENHRWVTAMDVAIGQAQTLDDPEWRKVLIAFANWRTPFMPSEDQPAGQVSI HHHHHHHCCCCCCEEEEEEEHHCCCCCCCCHHHHEEEEEEECCCCCCCCCCCCCCCCEEH SELANFKKLSPGARKLVEASCFYYEKGVFPAGLVSSSPPSKYVESRTRAQRAESSE HHHHHHHHCCHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TDSAPHVVAQADALLLPNRMGNRPVQVPADRPGIVIFIHGVNDPGAGYPTVERGLCQAF CCCCCCHHHCCCCEECCCCCCCCCEECCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHH NERLSRIDLRAGQYGVKYAEAKKSPVKPGEQGYKEVASVKYDPDTYLYQRSEDTTSKLPT HHHHHHHHHCCCCCCCCHHHCCCCCCCCCHHHHHHHHCCCCCCCCEEEECCCCHHHHCCC HSMFIPFYWGYRASNNEIAKDKRGNPTRLRSQYQDTAGNRLDAHFAKAGGFFVNATSNLP CEEEEEEEECEECCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHCCCEEEEECCCCC DMYGKGFETTLKTRGVQMVSPDFTYFGNAPPRRYFVLAAERLAMLVSEIRRLAPDDTITI HHHCCCCHHHHHHCCEEEECCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCEEEE MGHSQGTMITLLAQAMLADRRQRCADCLILVDSPYSLLEPEGEEQTTQAKLQTLINIVNA EECCCCHHHHHHHHHHHHHHHHHHCEEEEEECCCHHHHCCCCCHHHHHHHHHHHHHHHHH VTTKPYARPSLSELQVGQPGYGGRTGHGWTPSQGTRLDAEGKQIVFAERDNRGKVYLYFC HHCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEEEEEECCCCEEEEEEC PQDTTVALDQVQGIGTYGVPDTVHVAWKRKFYSTERTASLPAMDALKDMRFHQRMWTKLL CCCCEEHHHHHCCCCCCCCCCCEEHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH RGGKPVAVGLPPRHIPLRMEDEARYPGGGVGPTTTASQTPLPQEGRYINGEALQPPHAPQ CCCCCEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCC MEDGEADVRQYKSSTPLRGTPTRAGKDAPDDVSVDVALGNPAAKLRQYMILVSIEQEEVP CCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHEEEEEEEECHHHCC ESKLAEMTSEFNAQHPDINDQTPGYTCDATDMGCTVWRHATPNEVRAQMTHNPAALTDNS HHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCEEEECCCCHHHHHHHCCCCCCCCCCC YHSAMLRSTENHRWVTAMDVAIGQAQTLDDPEWRKVLIAFANWRTPFMPSEDQPAGQVSI HHHHHHHCCCCCCEEEEEEEHHCCCCCCCCHHHHEEEEEEECCCCCCCCCCCCCCCCEEH SELANFKKLSPGARKLVEASCFYYEKGVFPAGLVSSSPPSKYVESRTRAQRAESSE HHHHHHHHCCHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA