Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84622567
Identifier: 84622567
GI number: 84622567
Start: 996289
End: 996981
Strand: Direct
Name: 84622567
Synonym: XOO_0910
Alternate gene names: NA
Gene position: 996289-996981 (Clockwise)
Preceding gene: 84622565
Following gene: 84622568
Centisome position: 20.17
GC content: 62.48
Gene sequence:
>693_bases ATGTATCTGCTGGGCCAGAGCAAGACGAACCTGTCGGCGCTGGAGTTGATGCGACACCTGGGAGTGAGCTACCCGACAGC GTGGCCAATGAAGCACAAGCTGATGCAGGCCATGACCCAACGCGAGGCGAACCGCAAGTTGGGCGGGATCGTGCAACTGG ACGATGCCTACCTGGGCGGAGAACGCAACGGTGGCAAGGCCGGGCGCGGCTCGGAGAACAAGCGCCCTTTCGTGATCGCC GTGGAGACCACTGAAGACGGTCGTCCATTGCGCGCGGTGATGGATCCGGTCCCAGGCTTCACCAAGGCGGCGCTGTCGGA ATGGATCGGGCAACGCCTGCATCCTGGAGCAGATGTCTACAGTGATGGACTCGGTGCGTTTCGAGCACTGGAAGCCGAGC ACGCGCACACGGTGATCGAAGGCAGCGGTCGAAGTCGCTGCGAGGCAGAGAACGCACGCTGGGTCAACGTGGTGTTGTCC AACCTAAAGCGTTCGCTGGACGGTGCCTATCACGCCTTCAAATTCGCCAAATACGCCCAGCGCTACCTGGCAGAGACGAT GTGGCGGTTCAACCGCCGTTTCGATCTGACCCGGCTGGTGCCCAGCTTGCTGGCCGCCGCAGCCGCCAGCAAGCCGTGGT CCGAGCGGGCCCTGCGTGATGTCACCATGTTCACCGCTGAAAGTGCGTGCTAA
Upstream 100 bases:
>100_bases CACGTACTGGCAGTGCACGGCCTGCTATCGCCAGACCAGCCTGCGCTCGGGCACGGTGATGGACAACAGCAAGCTGCCGC TACGCACCTAGCTGCTTGGC
Downstream 100 bases:
>100_bases TCAGGACGCGCGATGCCGCGACGCATTGCATGCCGCATCGCGAGTGCTTGCAGGACTGCAGCATCGTTTGCTCGCTGCTG GCGTCCGCATGCGCGAAGCA
Product: ISXo5 transposase
Products: NA
Alternate protein names: ISXo2 Transposase; ISSpo8 Transposase; ISXo2 Transposase; Outer Membrane Efflux Protein; ISSod11 Transposase; ISXo5 Transposase
Number of amino acids: Translated: 230; Mature: 230
Protein sequence:
>230_residues MYLLGQSKTNLSALELMRHLGVSYPTAWPMKHKLMQAMTQREANRKLGGIVQLDDAYLGGERNGGKAGRGSENKRPFVIA VETTEDGRPLRAVMDPVPGFTKAALSEWIGQRLHPGADVYSDGLGAFRALEAEHAHTVIEGSGRSRCEAENARWVNVVLS NLKRSLDGAYHAFKFAKYAQRYLAETMWRFNRRFDLTRLVPSLLAAAAASKPWSERALRDVTMFTAESAC
Sequences:
>Translated_230_residues MYLLGQSKTNLSALELMRHLGVSYPTAWPMKHKLMQAMTQREANRKLGGIVQLDDAYLGGERNGGKAGRGSENKRPFVIA VETTEDGRPLRAVMDPVPGFTKAALSEWIGQRLHPGADVYSDGLGAFRALEAEHAHTVIEGSGRSRCEAENARWVNVVLS NLKRSLDGAYHAFKFAKYAQRYLAETMWRFNRRFDLTRLVPSLLAAAAASKPWSERALRDVTMFTAESAC >Mature_230_residues MYLLGQSKTNLSALELMRHLGVSYPTAWPMKHKLMQAMTQREANRKLGGIVQLDDAYLGGERNGGKAGRGSENKRPFVIA VETTEDGRPLRAVMDPVPGFTKAALSEWIGQRLHPGADVYSDGLGAFRALEAEHAHTVIEGSGRSRCEAENARWVNVVLS NLKRSLDGAYHAFKFAKYAQRYLAETMWRFNRRFDLTRLVPSLLAAAAASKPWSERALRDVTMFTAESAC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25571; Mature: 25571
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYLLGQSKTNLSALELMRHLGVSYPTAWPMKHKLMQAMTQREANRKLGGIVQLDDAYLGG CCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCCCC ERNGGKAGRGSENKRPFVIAVETTEDGRPLRAVMDPVPGFTKAALSEWIGQRLHPGADVY CCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHH SDGLGAFRALEAEHAHTVIEGSGRSRCEAENARWVNVVLSNLKRSLDGAYHAFKFAKYAQ HHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RYLAETMWRFNRRFDLTRLVPSLLAAAAASKPWSERALRDVTMFTAESAC HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MYLLGQSKTNLSALELMRHLGVSYPTAWPMKHKLMQAMTQREANRKLGGIVQLDDAYLGG CCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCCCC ERNGGKAGRGSENKRPFVIAVETTEDGRPLRAVMDPVPGFTKAALSEWIGQRLHPGADVY CCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHH SDGLGAFRALEAEHAHTVIEGSGRSRCEAENARWVNVVLSNLKRSLDGAYHAFKFAKYAQ HHHHHHHHHHHHHHHHHEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RYLAETMWRFNRRFDLTRLVPSLLAAAAASKPWSERALRDVTMFTAESAC HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA