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The map label for this gene is yafE [H]

Identifier: 84622516

GI number: 84622516

Start: 936638

End: 937066

Strand: Direct

Name: yafE [H]

Synonym: XOO_0859

Alternate gene names: 84622516

Gene position: 936638-937066 (Clockwise)

Preceding gene: 84622515

Following gene: 84622517

Centisome position: 18.96

GC content: 62.7

Gene sequence:

>429_bases
ATGCAGTGGTCAGTCGCTACTCGGCGCACCATTGGCGACCTGGGACAAGCACTGCGCGAAGTGCGGCGTGTGCTGCGTCC
GGGCGGTATCGCTGCGTTCATCGATGTGGTGGCGCCGGGATTGCCGTTGTTGGACACGCACCTGCAGGCAATCGAGTTGC
TGCGCGACACCAGCCACGTGCGCGACTACAGCGTTGCGCAATGGTTGCAGATGGTGGGCGATGCCGGCCTGCAGGTGCAG
CGGCATCAGTGCCAGCGCCTGCAGTTGGATTACGCAGGCTGGGTGGATCGCATGCGCACCCCGCAGGTCATGCGTGAAGC
AATCCGCGCATTGCAGAACGCGGCGGTAGATGCGGTACGCGATCATTTCCAGATCGATGCCGATGGCTCTTTCAGCACCG
ACGTGCTGGTGCTTTGGGCAGTACGTTGA

Upstream 100 bases:

>100_bases
CTCAAGGTCGTGGTGGCGACTGCCGGCGAACGAGGGCTGACGCAGATATCGACGCTGCAAGGTGTCGCCGAGCGCCTTCC
GTTCGAGGCCGGCAGCATGG

Downstream 100 bases:

>100_bases
TTCCAATGACGCTGCGGCGTTACTCACGAGGATGGCATGAGCAAGCAGATTCTGATTCTTCCCGGCGACGGGATCGGGCC
GGAGATCATGGCCGAAGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MQWSVATRRTIGDLGQALREVRRVLRPGGIAAFIDVVAPGLPLLDTHLQAIELLRDTSHVRDYSVAQWLQMVGDAGLQVQ
RHQCQRLQLDYAGWVDRMRTPQVMREAIRALQNAAVDAVRDHFQIDADGSFSTDVLVLWAVR

Sequences:

>Translated_142_residues
MQWSVATRRTIGDLGQALREVRRVLRPGGIAAFIDVVAPGLPLLDTHLQAIELLRDTSHVRDYSVAQWLQMVGDAGLQVQ
RHQCQRLQLDYAGWVDRMRTPQVMREAIRALQNAAVDAVRDHFQIDADGSFSTDVLVLWAVR
>Mature_142_residues
MQWSVATRRTIGDLGQALREVRRVLRPGGIAAFIDVVAPGLPLLDTHLQAIELLRDTSHVRDYSVAQWLQMVGDAGLQVQ
RHQCQRLQLDYAGWVDRMRTPQVMREAIRALQNAAVDAVRDHFQIDADGSFSTDVLVLWAVR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily [H]

Homologues:

Organism=Escherichia coli, GI1786404, Length=126, Percent_Identity=44.4444444444444, Blast_Score=123, Evalue=4e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 16027; Mature: 16027

Theoretical pI: Translated: 7.69; Mature: 7.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQWSVATRRTIGDLGQALREVRRVLRPGGIAAFIDVVAPGLPLLDTHLQAIELLRDTSHV
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
RDYSVAQWLQMVGDAGLQVQRHQCQRLQLDYAGWVDRMRTPQVMREAIRALQNAAVDAVR
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
DHFQIDADGSFSTDVLVLWAVR
HHHCCCCCCCCCCCEEEEEECC
>Mature Secondary Structure
MQWSVATRRTIGDLGQALREVRRVLRPGGIAAFIDVVAPGLPLLDTHLQAIELLRDTSHV
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
RDYSVAQWLQMVGDAGLQVQRHQCQRLQLDYAGWVDRMRTPQVMREAIRALQNAAVDAVR
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
DHFQIDADGSFSTDVLVLWAVR
HHHCCCCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1663890; 9278503 [H]