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The map label for this gene is yddV [C]

Identifier: 84622512

GI number: 84622512

Start: 932093

End: 932833

Strand: Direct

Name: yddV [C]

Synonym: XOO_0855

Alternate gene names: 84622512

Gene position: 932093-932833 (Clockwise)

Preceding gene: 84622511

Following gene: 84622514

Centisome position: 18.87

GC content: 65.05

Gene sequence:

>741_bases
GTGGACTGGCGGCAAAGCGATTTACTGGGCGAGGCCAGCCTGGTCATCGCACTGGCGCCGCCGTGGTGGCGCCGGGGCAA
AGTGATCGGTCTGGCTATCCTCGGCCTGGCGAGCGTGGTCTACGGATTTTATCTGTGGCGGGCCGCCAGTTATCGCCGAC
GTCACCGCCAGCTCAATACCGTCACCGATCGTTGCACGCGCGAACTGAGCGACAAGAACCTGGCGCTGCAGCAGGCCAGC
CAGGAACGCGAAGCGTTGATGCGCCAGCTGGAGTATCGCGCCAGTCACGACGTGCTGACGGCGCTGCCGAACCGGCGCAA
AGCCGAGCGTGTGCTGCAGCAAGGGTTCGATGAGGCACATGCAGGTGGTGCCGCACTGGCGCTAGCGTTGATGGATATCG
ACCACTTCAAGCGCATCAACGACTGCGAGCGCATCAACGACGACGGTCACGAGGTTGGCGATGCGGTGCTGTCGGCCATC
GGCCAGGCGTTGAGCGAGCAGGATCAGGCGCGCTGCTTTGCCGCACGGCTTCGGTGGCGAAGAATTCCTGCTGGCGGTCA
CCGGGCTGGATGCGGCACAGGCGCGCGCGCTGTTCGAGCGCATGCGACAGCGCTTGGCCGACATCCAGGTCGATGCGCAA
GGCACGCCCGTGCGTTGTACCGCCAGCATGGGCATGGCGATGAGCGACGAAGCGCCAAGCCGACGCGCACTGCTGGCGTT
AGCCGATCGTCGTCTGTATGA

Upstream 100 bases:

>100_bases
GCGGTGAGCGCCCTGCTGCGGCGCGCCGACGGCGCGTTGTGGGTGGGCACGCCGCAGGCGCTGTAACGCATCGAGGGCGA
CGGGCGGGTGGTCGCTGTCG

Downstream 100 bases:

>100_bases
CGCCAAGCGTCAGGGGCGCGATCGCTTGATCGGGCCGTAAGACGGTGCGCCGTTGCCTGAAGTTTTGGGCGCGGACTCGA
TGCAATGCAGGCGTTCGTAC

Product: hypothetical protein

Products: NA

Alternate protein names: Diguanylate Cyclase/Phosphodiesterase; GGDEF Family Protein

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MDWRQSDLLGEASLVIALAPPWWRRGKVIGLAILGLASVVYGFYLWRAASYRRRHRQLNTVTDRCTRELSDKNLALQQAS
QEREALMRQLEYRASHDVLTALPNRRKAERVLQQGFDEAHAGGAALALALMDIDHFKRINDCERINDDGHEVGDAVLSAI
GQALSEQDQARCFAARLRWRRIPAGGHRAGCGTGARAVRAHATALGRHPGRCARHARALYRQHGHGDERRSAKPTRTAGV
SRSSSV

Sequences:

>Translated_246_residues
MDWRQSDLLGEASLVIALAPPWWRRGKVIGLAILGLASVVYGFYLWRAASYRRRHRQLNTVTDRCTRELSDKNLALQQAS
QEREALMRQLEYRASHDVLTALPNRRKAERVLQQGFDEAHAGGAALALALMDIDHFKRINDCERINDDGHEVGDAVLSAI
GQALSEQDQARCFAARLRWRRIPAGGHRAGCGTGARAVRAHATALGRHPGRCARHARALYRQHGHGDERRSAKPTRTAGV
SRSSSV
>Mature_246_residues
MDWRQSDLLGEASLVIALAPPWWRRGKVIGLAILGLASVVYGFYLWRAASYRRRHRQLNTVTDRCTRELSDKNLALQQAS
QEREALMRQLEYRASHDVLTALPNRRKAERVLQQGFDEAHAGGAALALALMDIDHFKRINDCERINDDGHEVGDAVLSAI
GQALSEQDQARCFAARLRWRRIPAGGHRAGCGTGARAVRAHATALGRHPGRCARHARALYRQHGHGDERRSAKPTRTAGV
SRSSSV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27381; Mature: 27381

Theoretical pI: Translated: 11.07; Mature: 11.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDWRQSDLLGEASLVIALAPPWWRRGKVIGLAILGLASVVYGFYLWRAASYRRRHRQLNT
CCCCHHHHCCCCCEEEEECCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTDRCTRELSDKNLALQQASQEREALMRQLEYRASHDVLTALPNRRKAERVLQQGFDEAH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHH
AGGAALALALMDIDHFKRINDCERINDDGHEVGDAVLSAIGQALSEQDQARCFAARLRWR
CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RIPAGGHRAGCGTGARAVRAHATALGRHPGRCARHARALYRQHGHGDERRSAKPTRTAGV
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCHHHCC
SRSSSV
CCCCCC
>Mature Secondary Structure
MDWRQSDLLGEASLVIALAPPWWRRGKVIGLAILGLASVVYGFYLWRAASYRRRHRQLNT
CCCCHHHHCCCCCEEEEECCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTDRCTRELSDKNLALQQASQEREALMRQLEYRASHDVLTALPNRRKAERVLQQGFDEAH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHH
AGGAALALALMDIDHFKRINDCERINDDGHEVGDAVLSAIGQALSEQDQARCFAARLRWR
CCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RIPAGGHRAGCGTGARAVRAHATALGRHPGRCARHARALYRQHGHGDERRSAKPTRTAGV
CCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCHHHCC
SRSSSV
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA