Definition Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome.
Accession NC_007705
Length 4,940,217

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The map label for this gene is 84622484

Identifier: 84622484

GI number: 84622484

Start: 899331

End: 902024

Strand: Direct

Name: 84622484

Synonym: XOO_0827

Alternate gene names: NA

Gene position: 899331-902024 (Clockwise)

Preceding gene: 84622483

Following gene: 84622485

Centisome position: 18.2

GC content: 60.36

Gene sequence:

>2694_bases
ATGCAGGTCACCGGCGTGCGCCGCGCCAATGCGGCGGCGGTGGAAAGCAAGCGCGCTGCGACCAACATCACCGATGTGAT
CAGCGCCACCGATGTGCGCGCCTTGCCCGACAGCACCATCGTCGAGGCGTTGCGCCGCGTGCCTGGTTTGTCGGTGTTGC
CGGCCACCGACAACGAGCATCCGCGCGATGAAGCCGCCACGCCGGTGTTGCGTGGCCTGGGGCCGTCGTACAACAACGTC
ACCATCGACGGGCTGACCATCGCCTCGCCCGGCACACCGAACGGCACGCTTGGCTCGATCACCCGCGGCGTGCGTCTGGA
TTTGCTGCCGGCCTCGATGGTCAGCGAACTGCAGGTGGTCAAAACCTTTACGCCCGATCTGGATCCCAACGCGACTGGCG
GTGCGATCAACCTCAAGACCCGCAGCGCGTTCGAAAATGGCGGCAAGCCGTTCTTCAGCGCCGACGCGGCACTTGGTCAT
GCCAACGATGTGGGCAAGCCGCGCGATCAGGAAGATCCCGGTTATCGCGTCAACGCCACCGGCAGCCGCACCTTCGGCAG
CGAGCAGCAATACGGCGTCACCGTCTCGGCCAACTATCAAACGTTGAGCAGCTACACCGAAACCCATATGACCACCGACA
CGGTGCATTACGGGTTCTACGACAACAACGGTGTGTTGCAGAGCGGCGCCAATCTCGGCAATGGCTGGGCGGTGCCGCAG
CAGGATAAATATTGGTACGTGCAAGATCAGCGCGACCGCTACGGCGTCACCGGCAAATTCGAGATGCGGCCTAGCGCAGC
GCTCGAAGCATATGCCATGGCCGGTTACTACTATTTCAAGGACGACATGGAGCGCAACGAGGTCATCATCGACCCGCGCA
ACCGTGGTAAGGTCTTCAATCAAACCGCTACCTCTGGCAGCTATCCCGGCGGCGATATCGAGGTGGGTTACTCGAACCAG
ATCGTCACCACGCGGACCAAGGTTGCGCAGCTGGGCACAATTTGGCGACCGACCGATCGACAGCAGTTTTCCGCGCGCGG
CGCCTGGTCGGATGCGACTTACGACGAGCCGATCCGCATGATCAAGTACGCGACCGGCATCACGCGCCCGGTACCGGTGC
CGGTGGGTCAGACCGGTAGTGGCGTGACCATCCATGCCACGCCGAACTATGCGTTCAATTACGACACGTCCGGTTTCGAT
CAACGTTTCGGTGTGTCGCCGCAGGCGTACAACAACTTGGACAATTACAGCCTGTTGTACTGGCGCCCGGACTACAAACG
CACCGCGGCCGATCGTATCCTCACCGGCCGGCTCGATTACGGCTTCAATCAGGGCGAAAGCGATCAAGGCATCGGTTTTG
CCGCAGGCGTCTCGTACACCACCGACAAGCCGTCCTATGACATCTATCGCGTGGAATATCAGCCCAATTCGACGGCGCCG
GCATTCGGCCTGGCCGATGTGGCGGGTACCGGCAGGCCGCCGATGCGCTATGTCGGTTTGAACCTGCTGAGCATCGACCC
GAACAAGGCGAACCGCGTGCTGGCCGCCACGCCCTTGAGTGCCTTCAACAGCACCGATCAGCAGGCTTTCAGCAATCAGG
ATAATTTCACGCATACCGAGAAAACGTTTGGCAGCTATGGTTTGATCAGCTATCGCAGCGATCGTTTGAATGTGCAAGCC
GGTGTGCATTTCGACAGCACCACGCTCGACACGGTCGGCCGCGAGCGGCAGCTGGACAGGGCAAGCAATCGCTACGTGTA
TGTCGATAATCCGACCACTGCGGACTACAACTATCTGTTGCCGTCGGCGGTGATGACCTATCACCTGACCGATGCACTGG
ATCTACGCGCCGGTGCAAGCCGCACGTTGGGTCGCCCGCCATACGATGCCTATGCCGCGCGTACGTCGATCGGCTTCGTC
AACACAACGGACGCCGGCAACCCGAATGCACAGGGCGTTACCGTCACCATTGGCAACCCGGATATCAAGCCACGCGTGTC
CAATAACCTGGATTTGTCGCTGGAATGGCGCCTTCCCGGCGATTTCGATGCATTCGCCTCCGCTGCCGTGTTCGACAAGC
ACATCCAGGACGAGATCTTTACGCTTTCGCGTGCCGACAGCTTTACCTTCGACGGCACCACCTATGCGAATGCATTGATC
AGTACACCGGCCAATGCCGCCAAGGCGCGTATCCGCGGTGTGGAATTCAATGGCATCGTCAATACGCTGGGGCCGATCGC
GCCATGGTTGAGCGGCGTAGGTTTTAGCGCCAATGTCGCGTTGCTCGATGGCAGCCTGGATGTGCCTTACAGTGTCGGCA
GTGGCAGCAGCGTGAGCCAAAGCGAGCGCAAACTCGATAACTTGGTCGGTCAGCCGGACTACACCGCCAATGCCACGTTG
TTCTACAACACCGGTGGGCTGGAACTGCGTGCGGCTTACAACCGGCAAGGCAAGGCGCTGCGGTCCATCGTCAGCAATAC
CGATTGGCAAGACCTGTACTGGTCGCCGCGTTCGCAACTGGATTTCACCGCAACCTATGCGGTGAGCAAGCAGTTGAGCC
TGATCGGCCAGGTCAGCAACATGACCCATAGCCGCATCACCAGCGTGACCGGTCCAGGGCAGAATCTGCTCAAGGACAGC
TATTCGGTACCCACCACCTATTGGGTGGGTCTGCGGTTCACGCCGACGTTGTAA

Upstream 100 bases:

>100_bases
ACCCTCAAGCAACGAACACACACCCTCGCTCAACGACACGGGCGGCAGCGATGCACCTGCCGCAGACGCAGCTAAAGGCA
GTGTACAAACGCTCGATGCC

Downstream 100 bases:

>100_bases
GCACGATTGGCCCGCGGTGACGGCCTTTCGGATCGTTGCCATCCAGCTGGAGTGCTTCCTTCCATAAGCCCATCACTGCA
GGCCACGCGTTGCATCTGCC

Product: TonB-dependent receptor

Products: NA

Alternate protein names: NB-Dependent Receptor Subfamily; NB-Dependent Outer Membrane Receptor; Nb-Dependent Receptor; NB-Dependent Receptor Plug; NB-Dependent Outer Membrane Receptor Protein; Nb-Dependent Outer Membrane Receptor Protein; Outer Membrane Insertion C-Terminal Signal; Outer Membrane Protein; NB Dependent Receptor; Nucleoside Diphosphate Kinase; NB-Dependent Receptor-Like Protein; NB-Dependent Receptor Subfamily Protein; Crossover Junction Endodeoxyribonuclease RuvC; NB-Dependent Outer Membrane Fe Receptor Protein; Exported nB-Dependent Receptor; NB-Dependent Maltose Outer Membrane Transporter MalA; Peptidase; Outer Membrane Receptor Family Protein; NB Dependent Receptor Protein; Outer Membrane Receptor Protein; Argininosuccinate Synthase; 3-Dehydroquinate Synthase; Ferrienterochelin/Colicin Outer Membrane Receptor

Number of amino acids: Translated: 897; Mature: 897

Protein sequence:

>897_residues
MQVTGVRRANAAAVESKRAATNITDVISATDVRALPDSTIVEALRRVPGLSVLPATDNEHPRDEAATPVLRGLGPSYNNV
TIDGLTIASPGTPNGTLGSITRGVRLDLLPASMVSELQVVKTFTPDLDPNATGGAINLKTRSAFENGGKPFFSADAALGH
ANDVGKPRDQEDPGYRVNATGSRTFGSEQQYGVTVSANYQTLSSYTETHMTTDTVHYGFYDNNGVLQSGANLGNGWAVPQ
QDKYWYVQDQRDRYGVTGKFEMRPSAALEAYAMAGYYYFKDDMERNEVIIDPRNRGKVFNQTATSGSYPGGDIEVGYSNQ
IVTTRTKVAQLGTIWRPTDRQQFSARGAWSDATYDEPIRMIKYATGITRPVPVPVGQTGSGVTIHATPNYAFNYDTSGFD
QRFGVSPQAYNNLDNYSLLYWRPDYKRTAADRILTGRLDYGFNQGESDQGIGFAAGVSYTTDKPSYDIYRVEYQPNSTAP
AFGLADVAGTGRPPMRYVGLNLLSIDPNKANRVLAATPLSAFNSTDQQAFSNQDNFTHTEKTFGSYGLISYRSDRLNVQA
GVHFDSTTLDTVGRERQLDRASNRYVYVDNPTTADYNYLLPSAVMTYHLTDALDLRAGASRTLGRPPYDAYAARTSIGFV
NTTDAGNPNAQGVTVTIGNPDIKPRVSNNLDLSLEWRLPGDFDAFASAAVFDKHIQDEIFTLSRADSFTFDGTTYANALI
STPANAAKARIRGVEFNGIVNTLGPIAPWLSGVGFSANVALLDGSLDVPYSVGSGSSVSQSERKLDNLVGQPDYTANATL
FYNTGGLELRAAYNRQGKALRSIVSNTDWQDLYWSPRSQLDFTATYAVSKQLSLIGQVSNMTHSRITSVTGPGQNLLKDS
YSVPTTYWVGLRFTPTL

Sequences:

>Translated_897_residues
MQVTGVRRANAAAVESKRAATNITDVISATDVRALPDSTIVEALRRVPGLSVLPATDNEHPRDEAATPVLRGLGPSYNNV
TIDGLTIASPGTPNGTLGSITRGVRLDLLPASMVSELQVVKTFTPDLDPNATGGAINLKTRSAFENGGKPFFSADAALGH
ANDVGKPRDQEDPGYRVNATGSRTFGSEQQYGVTVSANYQTLSSYTETHMTTDTVHYGFYDNNGVLQSGANLGNGWAVPQ
QDKYWYVQDQRDRYGVTGKFEMRPSAALEAYAMAGYYYFKDDMERNEVIIDPRNRGKVFNQTATSGSYPGGDIEVGYSNQ
IVTTRTKVAQLGTIWRPTDRQQFSARGAWSDATYDEPIRMIKYATGITRPVPVPVGQTGSGVTIHATPNYAFNYDTSGFD
QRFGVSPQAYNNLDNYSLLYWRPDYKRTAADRILTGRLDYGFNQGESDQGIGFAAGVSYTTDKPSYDIYRVEYQPNSTAP
AFGLADVAGTGRPPMRYVGLNLLSIDPNKANRVLAATPLSAFNSTDQQAFSNQDNFTHTEKTFGSYGLISYRSDRLNVQA
GVHFDSTTLDTVGRERQLDRASNRYVYVDNPTTADYNYLLPSAVMTYHLTDALDLRAGASRTLGRPPYDAYAARTSIGFV
NTTDAGNPNAQGVTVTIGNPDIKPRVSNNLDLSLEWRLPGDFDAFASAAVFDKHIQDEIFTLSRADSFTFDGTTYANALI
STPANAAKARIRGVEFNGIVNTLGPIAPWLSGVGFSANVALLDGSLDVPYSVGSGSSVSQSERKLDNLVGQPDYTANATL
FYNTGGLELRAAYNRQGKALRSIVSNTDWQDLYWSPRSQLDFTATYAVSKQLSLIGQVSNMTHSRITSVTGPGQNLLKDS
YSVPTTYWVGLRFTPTL
>Mature_897_residues
MQVTGVRRANAAAVESKRAATNITDVISATDVRALPDSTIVEALRRVPGLSVLPATDNEHPRDEAATPVLRGLGPSYNNV
TIDGLTIASPGTPNGTLGSITRGVRLDLLPASMVSELQVVKTFTPDLDPNATGGAINLKTRSAFENGGKPFFSADAALGH
ANDVGKPRDQEDPGYRVNATGSRTFGSEQQYGVTVSANYQTLSSYTETHMTTDTVHYGFYDNNGVLQSGANLGNGWAVPQ
QDKYWYVQDQRDRYGVTGKFEMRPSAALEAYAMAGYYYFKDDMERNEVIIDPRNRGKVFNQTATSGSYPGGDIEVGYSNQ
IVTTRTKVAQLGTIWRPTDRQQFSARGAWSDATYDEPIRMIKYATGITRPVPVPVGQTGSGVTIHATPNYAFNYDTSGFD
QRFGVSPQAYNNLDNYSLLYWRPDYKRTAADRILTGRLDYGFNQGESDQGIGFAAGVSYTTDKPSYDIYRVEYQPNSTAP
AFGLADVAGTGRPPMRYVGLNLLSIDPNKANRVLAATPLSAFNSTDQQAFSNQDNFTHTEKTFGSYGLISYRSDRLNVQA
GVHFDSTTLDTVGRERQLDRASNRYVYVDNPTTADYNYLLPSAVMTYHLTDALDLRAGASRTLGRPPYDAYAARTSIGFV
NTTDAGNPNAQGVTVTIGNPDIKPRVSNNLDLSLEWRLPGDFDAFASAAVFDKHIQDEIFTLSRADSFTFDGTTYANALI
STPANAAKARIRGVEFNGIVNTLGPIAPWLSGVGFSANVALLDGSLDVPYSVGSGSSVSQSERKLDNLVGQPDYTANATL
FYNTGGLELRAAYNRQGKALRSIVSNTDWQDLYWSPRSQLDFTATYAVSKQLSLIGQVSNMTHSRITSVTGPGQNLLKDS
YSVPTTYWVGLRFTPTL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 97653; Mature: 97653

Theoretical pI: Translated: 5.90; Mature: 5.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQVTGVRRANAAAVESKRAATNITDVISATDVRALPDSTIVEALRRVPGLSVLPATDNEH
CCCCCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEECCCCCCC
PRDEAATPVLRGLGPSYNNVTIDGLTIASPGTPNGTLGSITRGVRLDLLPASMVSELQVV
CCHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCHHHHCCCEEEEEECHHHHHHHHHH
KTFTPDLDPNATGGAINLKTRSAFENGGKPFFSADAALGHANDVGKPRDQEDPGYRVNAT
HHCCCCCCCCCCCCEEEEEEHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEECC
GSRTFGSEQQYGVTVSANYQTLSSYTETHMTTDTVHYGFYDNNGVLQSGANLGNGWAVPQ
CCCCCCCCCCCCEEEECCCHHHHHHHHHCCEECEEEEEEECCCCEEECCCCCCCCCCCCC
QDKYWYVQDQRDRYGVTGKFEMRPSAALEAYAMAGYYYFKDDMERNEVIIDPRNRGKVFN
CCCEEEEECCCCCCCCCEEEECCCHHHHHHHHHEEEEEEECCCCCCEEEECCCCCCCEEE
QTATSGSYPGGDIEVGYSNQIVTTRTKVAQLGTIWRPTDRQQFSARGAWSDATYDEPIRM
ECCCCCCCCCCCEEECCCCCEEEEHHHHHHHCCEECCCCCHHHHCCCCCCCCCCCHHHHH
IKYATGITRPVPVPVGQTGSGVTIHATPNYAFNYDTSGFDQRFGVSPQAYNNLDNYSLLY
HHHHHCCCCCCCCCCCCCCCCEEEEECCCEEEECCCCCCCHHCCCCCHHHCCCCCCEEEE
WRPDYKRTAADRILTGRLDYGFNQGESDQGIGFAAGVSYTTDKPSYDIYRVEYQPNSTAP
ECCCHHHHHHHHEEEEEECCCCCCCCCCCCCEEEECCEECCCCCCCEEEEEEECCCCCCC
AFGLADVAGTGRPPMRYVGLNLLSIDPNKANRVLAATPLSAFNSTDQQAFSNQDNFTHTE
CCCCHHHCCCCCCCEEEECEEEEEECCCCCCEEEEECCHHHCCCCHHHHHCCCCCCCCHH
KTFGSYGLISYRSDRLNVQAGVHFDSTTLDTVGRERQLDRASNRYVYVDNPTTADYNYLL
HHCCCCCEEEEECCCEEEEEECEECCCHHHHHCCHHHHHHHCCCEEEECCCCCCCCCCCC
PSAVMTYHLTDALDLRAGASRTLGRPPYDAYAARTSIGFVNTTDAGNPNAQGVTVTIGNP
HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCEEECCCCCCCCCCEEEEEECCC
DIKPRVSNNLDLSLEWRLPGDFDAFASAAVFDKHIQDEIFTLSRADSFTFDGTTYANALI
CCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHEEEECCCCEEECCHHHHHHHH
STPANAAKARIRGVEFNGIVNTLGPIAPWLSGVGFSANVALLDGSLDVPYSVGSGSSVSQ
CCCCHHHHHEEECEEECCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEECCCCCCCHH
SERKLDNLVGQPDYTANATLFYNTGGLELRAAYNRQGKALRSIVSNTDWQDLYWSPRSQL
HHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCHHHHHHHHCCCCCHHHCCCCCCCC
DFTATYAVSKQLSLIGQVSNMTHSRITSVTGPGQNLLKDSYSVPTTYWVGLRFTPTL
EEEEEHHHHHHHHHHHHHHCCCHHHHEECCCCCHHHHHCCCCCCEEEEEEEEEECCC
>Mature Secondary Structure
MQVTGVRRANAAAVESKRAATNITDVISATDVRALPDSTIVEALRRVPGLSVLPATDNEH
CCCCCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEECCCCCCC
PRDEAATPVLRGLGPSYNNVTIDGLTIASPGTPNGTLGSITRGVRLDLLPASMVSELQVV
CCHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCHHHHCCCEEEEEECHHHHHHHHHH
KTFTPDLDPNATGGAINLKTRSAFENGGKPFFSADAALGHANDVGKPRDQEDPGYRVNAT
HHCCCCCCCCCCCCEEEEEEHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEECC
GSRTFGSEQQYGVTVSANYQTLSSYTETHMTTDTVHYGFYDNNGVLQSGANLGNGWAVPQ
CCCCCCCCCCCCEEEECCCHHHHHHHHHCCEECEEEEEEECCCCEEECCCCCCCCCCCCC
QDKYWYVQDQRDRYGVTGKFEMRPSAALEAYAMAGYYYFKDDMERNEVIIDPRNRGKVFN
CCCEEEEECCCCCCCCCEEEECCCHHHHHHHHHEEEEEEECCCCCCEEEECCCCCCCEEE
QTATSGSYPGGDIEVGYSNQIVTTRTKVAQLGTIWRPTDRQQFSARGAWSDATYDEPIRM
ECCCCCCCCCCCEEECCCCCEEEEHHHHHHHCCEECCCCCHHHHCCCCCCCCCCCHHHHH
IKYATGITRPVPVPVGQTGSGVTIHATPNYAFNYDTSGFDQRFGVSPQAYNNLDNYSLLY
HHHHHCCCCCCCCCCCCCCCCEEEEECCCEEEECCCCCCCHHCCCCCHHHCCCCCCEEEE
WRPDYKRTAADRILTGRLDYGFNQGESDQGIGFAAGVSYTTDKPSYDIYRVEYQPNSTAP
ECCCHHHHHHHHEEEEEECCCCCCCCCCCCCEEEECCEECCCCCCCEEEEEEECCCCCCC
AFGLADVAGTGRPPMRYVGLNLLSIDPNKANRVLAATPLSAFNSTDQQAFSNQDNFTHTE
CCCCHHHCCCCCCCEEEECEEEEEECCCCCCEEEEECCHHHCCCCHHHHHCCCCCCCCHH
KTFGSYGLISYRSDRLNVQAGVHFDSTTLDTVGRERQLDRASNRYVYVDNPTTADYNYLL
HHCCCCCEEEEECCCEEEEEECEECCCHHHHHCCHHHHHHHCCCEEEECCCCCCCCCCCC
PSAVMTYHLTDALDLRAGASRTLGRPPYDAYAARTSIGFVNTTDAGNPNAQGVTVTIGNP
HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCEEECCCCCCCCCCEEEEEECCC
DIKPRVSNNLDLSLEWRLPGDFDAFASAAVFDKHIQDEIFTLSRADSFTFDGTTYANALI
CCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHEEEECCCCEEECCHHHHHHHH
STPANAAKARIRGVEFNGIVNTLGPIAPWLSGVGFSANVALLDGSLDVPYSVGSGSSVSQ
CCCCHHHHHEEECEEECCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEECCCCCCCHH
SERKLDNLVGQPDYTANATLFYNTGGLELRAAYNRQGKALRSIVSNTDWQDLYWSPRSQL
HHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCHHHHHHHHCCCCCHHHCCCCCCCC
DFTATYAVSKQLSLIGQVSNMTHSRITSVTGPGQNLLKDSYSVPTTYWVGLRFTPTL
EEEEEHHHHHHHHHHHHHHCCCHHHHEECCCCCHHHHHCCCCCCEEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA