Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84622484
Identifier: 84622484
GI number: 84622484
Start: 899331
End: 902024
Strand: Direct
Name: 84622484
Synonym: XOO_0827
Alternate gene names: NA
Gene position: 899331-902024 (Clockwise)
Preceding gene: 84622483
Following gene: 84622485
Centisome position: 18.2
GC content: 60.36
Gene sequence:
>2694_bases ATGCAGGTCACCGGCGTGCGCCGCGCCAATGCGGCGGCGGTGGAAAGCAAGCGCGCTGCGACCAACATCACCGATGTGAT CAGCGCCACCGATGTGCGCGCCTTGCCCGACAGCACCATCGTCGAGGCGTTGCGCCGCGTGCCTGGTTTGTCGGTGTTGC CGGCCACCGACAACGAGCATCCGCGCGATGAAGCCGCCACGCCGGTGTTGCGTGGCCTGGGGCCGTCGTACAACAACGTC ACCATCGACGGGCTGACCATCGCCTCGCCCGGCACACCGAACGGCACGCTTGGCTCGATCACCCGCGGCGTGCGTCTGGA TTTGCTGCCGGCCTCGATGGTCAGCGAACTGCAGGTGGTCAAAACCTTTACGCCCGATCTGGATCCCAACGCGACTGGCG GTGCGATCAACCTCAAGACCCGCAGCGCGTTCGAAAATGGCGGCAAGCCGTTCTTCAGCGCCGACGCGGCACTTGGTCAT GCCAACGATGTGGGCAAGCCGCGCGATCAGGAAGATCCCGGTTATCGCGTCAACGCCACCGGCAGCCGCACCTTCGGCAG CGAGCAGCAATACGGCGTCACCGTCTCGGCCAACTATCAAACGTTGAGCAGCTACACCGAAACCCATATGACCACCGACA CGGTGCATTACGGGTTCTACGACAACAACGGTGTGTTGCAGAGCGGCGCCAATCTCGGCAATGGCTGGGCGGTGCCGCAG CAGGATAAATATTGGTACGTGCAAGATCAGCGCGACCGCTACGGCGTCACCGGCAAATTCGAGATGCGGCCTAGCGCAGC GCTCGAAGCATATGCCATGGCCGGTTACTACTATTTCAAGGACGACATGGAGCGCAACGAGGTCATCATCGACCCGCGCA ACCGTGGTAAGGTCTTCAATCAAACCGCTACCTCTGGCAGCTATCCCGGCGGCGATATCGAGGTGGGTTACTCGAACCAG ATCGTCACCACGCGGACCAAGGTTGCGCAGCTGGGCACAATTTGGCGACCGACCGATCGACAGCAGTTTTCCGCGCGCGG CGCCTGGTCGGATGCGACTTACGACGAGCCGATCCGCATGATCAAGTACGCGACCGGCATCACGCGCCCGGTACCGGTGC CGGTGGGTCAGACCGGTAGTGGCGTGACCATCCATGCCACGCCGAACTATGCGTTCAATTACGACACGTCCGGTTTCGAT CAACGTTTCGGTGTGTCGCCGCAGGCGTACAACAACTTGGACAATTACAGCCTGTTGTACTGGCGCCCGGACTACAAACG CACCGCGGCCGATCGTATCCTCACCGGCCGGCTCGATTACGGCTTCAATCAGGGCGAAAGCGATCAAGGCATCGGTTTTG CCGCAGGCGTCTCGTACACCACCGACAAGCCGTCCTATGACATCTATCGCGTGGAATATCAGCCCAATTCGACGGCGCCG GCATTCGGCCTGGCCGATGTGGCGGGTACCGGCAGGCCGCCGATGCGCTATGTCGGTTTGAACCTGCTGAGCATCGACCC GAACAAGGCGAACCGCGTGCTGGCCGCCACGCCCTTGAGTGCCTTCAACAGCACCGATCAGCAGGCTTTCAGCAATCAGG ATAATTTCACGCATACCGAGAAAACGTTTGGCAGCTATGGTTTGATCAGCTATCGCAGCGATCGTTTGAATGTGCAAGCC GGTGTGCATTTCGACAGCACCACGCTCGACACGGTCGGCCGCGAGCGGCAGCTGGACAGGGCAAGCAATCGCTACGTGTA TGTCGATAATCCGACCACTGCGGACTACAACTATCTGTTGCCGTCGGCGGTGATGACCTATCACCTGACCGATGCACTGG ATCTACGCGCCGGTGCAAGCCGCACGTTGGGTCGCCCGCCATACGATGCCTATGCCGCGCGTACGTCGATCGGCTTCGTC AACACAACGGACGCCGGCAACCCGAATGCACAGGGCGTTACCGTCACCATTGGCAACCCGGATATCAAGCCACGCGTGTC CAATAACCTGGATTTGTCGCTGGAATGGCGCCTTCCCGGCGATTTCGATGCATTCGCCTCCGCTGCCGTGTTCGACAAGC ACATCCAGGACGAGATCTTTACGCTTTCGCGTGCCGACAGCTTTACCTTCGACGGCACCACCTATGCGAATGCATTGATC AGTACACCGGCCAATGCCGCCAAGGCGCGTATCCGCGGTGTGGAATTCAATGGCATCGTCAATACGCTGGGGCCGATCGC GCCATGGTTGAGCGGCGTAGGTTTTAGCGCCAATGTCGCGTTGCTCGATGGCAGCCTGGATGTGCCTTACAGTGTCGGCA GTGGCAGCAGCGTGAGCCAAAGCGAGCGCAAACTCGATAACTTGGTCGGTCAGCCGGACTACACCGCCAATGCCACGTTG TTCTACAACACCGGTGGGCTGGAACTGCGTGCGGCTTACAACCGGCAAGGCAAGGCGCTGCGGTCCATCGTCAGCAATAC CGATTGGCAAGACCTGTACTGGTCGCCGCGTTCGCAACTGGATTTCACCGCAACCTATGCGGTGAGCAAGCAGTTGAGCC TGATCGGCCAGGTCAGCAACATGACCCATAGCCGCATCACCAGCGTGACCGGTCCAGGGCAGAATCTGCTCAAGGACAGC TATTCGGTACCCACCACCTATTGGGTGGGTCTGCGGTTCACGCCGACGTTGTAA
Upstream 100 bases:
>100_bases ACCCTCAAGCAACGAACACACACCCTCGCTCAACGACACGGGCGGCAGCGATGCACCTGCCGCAGACGCAGCTAAAGGCA GTGTACAAACGCTCGATGCC
Downstream 100 bases:
>100_bases GCACGATTGGCCCGCGGTGACGGCCTTTCGGATCGTTGCCATCCAGCTGGAGTGCTTCCTTCCATAAGCCCATCACTGCA GGCCACGCGTTGCATCTGCC
Product: TonB-dependent receptor
Products: NA
Alternate protein names: NB-Dependent Receptor Subfamily; NB-Dependent Outer Membrane Receptor; Nb-Dependent Receptor; NB-Dependent Receptor Plug; NB-Dependent Outer Membrane Receptor Protein; Nb-Dependent Outer Membrane Receptor Protein; Outer Membrane Insertion C-Terminal Signal; Outer Membrane Protein; NB Dependent Receptor; Nucleoside Diphosphate Kinase; NB-Dependent Receptor-Like Protein; NB-Dependent Receptor Subfamily Protein; Crossover Junction Endodeoxyribonuclease RuvC; NB-Dependent Outer Membrane Fe Receptor Protein; Exported nB-Dependent Receptor; NB-Dependent Maltose Outer Membrane Transporter MalA; Peptidase; Outer Membrane Receptor Family Protein; NB Dependent Receptor Protein; Outer Membrane Receptor Protein; Argininosuccinate Synthase; 3-Dehydroquinate Synthase; Ferrienterochelin/Colicin Outer Membrane Receptor
Number of amino acids: Translated: 897; Mature: 897
Protein sequence:
>897_residues MQVTGVRRANAAAVESKRAATNITDVISATDVRALPDSTIVEALRRVPGLSVLPATDNEHPRDEAATPVLRGLGPSYNNV TIDGLTIASPGTPNGTLGSITRGVRLDLLPASMVSELQVVKTFTPDLDPNATGGAINLKTRSAFENGGKPFFSADAALGH ANDVGKPRDQEDPGYRVNATGSRTFGSEQQYGVTVSANYQTLSSYTETHMTTDTVHYGFYDNNGVLQSGANLGNGWAVPQ QDKYWYVQDQRDRYGVTGKFEMRPSAALEAYAMAGYYYFKDDMERNEVIIDPRNRGKVFNQTATSGSYPGGDIEVGYSNQ IVTTRTKVAQLGTIWRPTDRQQFSARGAWSDATYDEPIRMIKYATGITRPVPVPVGQTGSGVTIHATPNYAFNYDTSGFD QRFGVSPQAYNNLDNYSLLYWRPDYKRTAADRILTGRLDYGFNQGESDQGIGFAAGVSYTTDKPSYDIYRVEYQPNSTAP AFGLADVAGTGRPPMRYVGLNLLSIDPNKANRVLAATPLSAFNSTDQQAFSNQDNFTHTEKTFGSYGLISYRSDRLNVQA GVHFDSTTLDTVGRERQLDRASNRYVYVDNPTTADYNYLLPSAVMTYHLTDALDLRAGASRTLGRPPYDAYAARTSIGFV NTTDAGNPNAQGVTVTIGNPDIKPRVSNNLDLSLEWRLPGDFDAFASAAVFDKHIQDEIFTLSRADSFTFDGTTYANALI STPANAAKARIRGVEFNGIVNTLGPIAPWLSGVGFSANVALLDGSLDVPYSVGSGSSVSQSERKLDNLVGQPDYTANATL FYNTGGLELRAAYNRQGKALRSIVSNTDWQDLYWSPRSQLDFTATYAVSKQLSLIGQVSNMTHSRITSVTGPGQNLLKDS YSVPTTYWVGLRFTPTL
Sequences:
>Translated_897_residues MQVTGVRRANAAAVESKRAATNITDVISATDVRALPDSTIVEALRRVPGLSVLPATDNEHPRDEAATPVLRGLGPSYNNV TIDGLTIASPGTPNGTLGSITRGVRLDLLPASMVSELQVVKTFTPDLDPNATGGAINLKTRSAFENGGKPFFSADAALGH ANDVGKPRDQEDPGYRVNATGSRTFGSEQQYGVTVSANYQTLSSYTETHMTTDTVHYGFYDNNGVLQSGANLGNGWAVPQ QDKYWYVQDQRDRYGVTGKFEMRPSAALEAYAMAGYYYFKDDMERNEVIIDPRNRGKVFNQTATSGSYPGGDIEVGYSNQ IVTTRTKVAQLGTIWRPTDRQQFSARGAWSDATYDEPIRMIKYATGITRPVPVPVGQTGSGVTIHATPNYAFNYDTSGFD QRFGVSPQAYNNLDNYSLLYWRPDYKRTAADRILTGRLDYGFNQGESDQGIGFAAGVSYTTDKPSYDIYRVEYQPNSTAP AFGLADVAGTGRPPMRYVGLNLLSIDPNKANRVLAATPLSAFNSTDQQAFSNQDNFTHTEKTFGSYGLISYRSDRLNVQA GVHFDSTTLDTVGRERQLDRASNRYVYVDNPTTADYNYLLPSAVMTYHLTDALDLRAGASRTLGRPPYDAYAARTSIGFV NTTDAGNPNAQGVTVTIGNPDIKPRVSNNLDLSLEWRLPGDFDAFASAAVFDKHIQDEIFTLSRADSFTFDGTTYANALI STPANAAKARIRGVEFNGIVNTLGPIAPWLSGVGFSANVALLDGSLDVPYSVGSGSSVSQSERKLDNLVGQPDYTANATL FYNTGGLELRAAYNRQGKALRSIVSNTDWQDLYWSPRSQLDFTATYAVSKQLSLIGQVSNMTHSRITSVTGPGQNLLKDS YSVPTTYWVGLRFTPTL >Mature_897_residues MQVTGVRRANAAAVESKRAATNITDVISATDVRALPDSTIVEALRRVPGLSVLPATDNEHPRDEAATPVLRGLGPSYNNV TIDGLTIASPGTPNGTLGSITRGVRLDLLPASMVSELQVVKTFTPDLDPNATGGAINLKTRSAFENGGKPFFSADAALGH ANDVGKPRDQEDPGYRVNATGSRTFGSEQQYGVTVSANYQTLSSYTETHMTTDTVHYGFYDNNGVLQSGANLGNGWAVPQ QDKYWYVQDQRDRYGVTGKFEMRPSAALEAYAMAGYYYFKDDMERNEVIIDPRNRGKVFNQTATSGSYPGGDIEVGYSNQ IVTTRTKVAQLGTIWRPTDRQQFSARGAWSDATYDEPIRMIKYATGITRPVPVPVGQTGSGVTIHATPNYAFNYDTSGFD QRFGVSPQAYNNLDNYSLLYWRPDYKRTAADRILTGRLDYGFNQGESDQGIGFAAGVSYTTDKPSYDIYRVEYQPNSTAP AFGLADVAGTGRPPMRYVGLNLLSIDPNKANRVLAATPLSAFNSTDQQAFSNQDNFTHTEKTFGSYGLISYRSDRLNVQA GVHFDSTTLDTVGRERQLDRASNRYVYVDNPTTADYNYLLPSAVMTYHLTDALDLRAGASRTLGRPPYDAYAARTSIGFV NTTDAGNPNAQGVTVTIGNPDIKPRVSNNLDLSLEWRLPGDFDAFASAAVFDKHIQDEIFTLSRADSFTFDGTTYANALI STPANAAKARIRGVEFNGIVNTLGPIAPWLSGVGFSANVALLDGSLDVPYSVGSGSSVSQSERKLDNLVGQPDYTANATL FYNTGGLELRAAYNRQGKALRSIVSNTDWQDLYWSPRSQLDFTATYAVSKQLSLIGQVSNMTHSRITSVTGPGQNLLKDS YSVPTTYWVGLRFTPTL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 97653; Mature: 97653
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVTGVRRANAAAVESKRAATNITDVISATDVRALPDSTIVEALRRVPGLSVLPATDNEH CCCCCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEECCCCCCC PRDEAATPVLRGLGPSYNNVTIDGLTIASPGTPNGTLGSITRGVRLDLLPASMVSELQVV CCHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCHHHHCCCEEEEEECHHHHHHHHHH KTFTPDLDPNATGGAINLKTRSAFENGGKPFFSADAALGHANDVGKPRDQEDPGYRVNAT HHCCCCCCCCCCCCEEEEEEHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEECC GSRTFGSEQQYGVTVSANYQTLSSYTETHMTTDTVHYGFYDNNGVLQSGANLGNGWAVPQ CCCCCCCCCCCCEEEECCCHHHHHHHHHCCEECEEEEEEECCCCEEECCCCCCCCCCCCC QDKYWYVQDQRDRYGVTGKFEMRPSAALEAYAMAGYYYFKDDMERNEVIIDPRNRGKVFN CCCEEEEECCCCCCCCCEEEECCCHHHHHHHHHEEEEEEECCCCCCEEEECCCCCCCEEE QTATSGSYPGGDIEVGYSNQIVTTRTKVAQLGTIWRPTDRQQFSARGAWSDATYDEPIRM ECCCCCCCCCCCEEECCCCCEEEEHHHHHHHCCEECCCCCHHHHCCCCCCCCCCCHHHHH IKYATGITRPVPVPVGQTGSGVTIHATPNYAFNYDTSGFDQRFGVSPQAYNNLDNYSLLY HHHHHCCCCCCCCCCCCCCCCEEEEECCCEEEECCCCCCCHHCCCCCHHHCCCCCCEEEE WRPDYKRTAADRILTGRLDYGFNQGESDQGIGFAAGVSYTTDKPSYDIYRVEYQPNSTAP ECCCHHHHHHHHEEEEEECCCCCCCCCCCCCEEEECCEECCCCCCCEEEEEEECCCCCCC AFGLADVAGTGRPPMRYVGLNLLSIDPNKANRVLAATPLSAFNSTDQQAFSNQDNFTHTE CCCCHHHCCCCCCCEEEECEEEEEECCCCCCEEEEECCHHHCCCCHHHHHCCCCCCCCHH KTFGSYGLISYRSDRLNVQAGVHFDSTTLDTVGRERQLDRASNRYVYVDNPTTADYNYLL HHCCCCCEEEEECCCEEEEEECEECCCHHHHHCCHHHHHHHCCCEEEECCCCCCCCCCCC PSAVMTYHLTDALDLRAGASRTLGRPPYDAYAARTSIGFVNTTDAGNPNAQGVTVTIGNP HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCEEECCCCCCCCCCEEEEEECCC DIKPRVSNNLDLSLEWRLPGDFDAFASAAVFDKHIQDEIFTLSRADSFTFDGTTYANALI CCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHEEEECCCCEEECCHHHHHHHH STPANAAKARIRGVEFNGIVNTLGPIAPWLSGVGFSANVALLDGSLDVPYSVGSGSSVSQ CCCCHHHHHEEECEEECCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEECCCCCCCHH SERKLDNLVGQPDYTANATLFYNTGGLELRAAYNRQGKALRSIVSNTDWQDLYWSPRSQL HHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCHHHHHHHHCCCCCHHHCCCCCCCC DFTATYAVSKQLSLIGQVSNMTHSRITSVTGPGQNLLKDSYSVPTTYWVGLRFTPTL EEEEEHHHHHHHHHHHHHHCCCHHHHEECCCCCHHHHHCCCCCCEEEEEEEEEECCC >Mature Secondary Structure MQVTGVRRANAAAVESKRAATNITDVISATDVRALPDSTIVEALRRVPGLSVLPATDNEH CCCCCCCCCCHHHHHHHHHHCCHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEECCCCCCC PRDEAATPVLRGLGPSYNNVTIDGLTIASPGTPNGTLGSITRGVRLDLLPASMVSELQVV CCHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCCCCHHHHCCCEEEEEECHHHHHHHHHH KTFTPDLDPNATGGAINLKTRSAFENGGKPFFSADAALGHANDVGKPRDQEDPGYRVNAT HHCCCCCCCCCCCCEEEEEEHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCEEEECC GSRTFGSEQQYGVTVSANYQTLSSYTETHMTTDTVHYGFYDNNGVLQSGANLGNGWAVPQ CCCCCCCCCCCCEEEECCCHHHHHHHHHCCEECEEEEEEECCCCEEECCCCCCCCCCCCC QDKYWYVQDQRDRYGVTGKFEMRPSAALEAYAMAGYYYFKDDMERNEVIIDPRNRGKVFN CCCEEEEECCCCCCCCCEEEECCCHHHHHHHHHEEEEEEECCCCCCEEEECCCCCCCEEE QTATSGSYPGGDIEVGYSNQIVTTRTKVAQLGTIWRPTDRQQFSARGAWSDATYDEPIRM ECCCCCCCCCCCEEECCCCCEEEEHHHHHHHCCEECCCCCHHHHCCCCCCCCCCCHHHHH IKYATGITRPVPVPVGQTGSGVTIHATPNYAFNYDTSGFDQRFGVSPQAYNNLDNYSLLY HHHHHCCCCCCCCCCCCCCCCEEEEECCCEEEECCCCCCCHHCCCCCHHHCCCCCCEEEE WRPDYKRTAADRILTGRLDYGFNQGESDQGIGFAAGVSYTTDKPSYDIYRVEYQPNSTAP ECCCHHHHHHHHEEEEEECCCCCCCCCCCCCEEEECCEECCCCCCCEEEEEEECCCCCCC AFGLADVAGTGRPPMRYVGLNLLSIDPNKANRVLAATPLSAFNSTDQQAFSNQDNFTHTE CCCCHHHCCCCCCCEEEECEEEEEECCCCCCEEEEECCHHHCCCCHHHHHCCCCCCCCHH KTFGSYGLISYRSDRLNVQAGVHFDSTTLDTVGRERQLDRASNRYVYVDNPTTADYNYLL HHCCCCCEEEEECCCEEEEEECEECCCHHHHHCCHHHHHHHCCCEEEECCCCCCCCCCCC PSAVMTYHLTDALDLRAGASRTLGRPPYDAYAARTSIGFVNTTDAGNPNAQGVTVTIGNP HHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCEEECCCCCCCCCCEEEEEECCC DIKPRVSNNLDLSLEWRLPGDFDAFASAAVFDKHIQDEIFTLSRADSFTFDGTTYANALI CCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHEEEECCCCEEECCHHHHHHHH STPANAAKARIRGVEFNGIVNTLGPIAPWLSGVGFSANVALLDGSLDVPYSVGSGSSVSQ CCCCHHHHHEEECEEECCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCEECCCCCCCHH SERKLDNLVGQPDYTANATLFYNTGGLELRAAYNRQGKALRSIVSNTDWQDLYWSPRSQL HHHHHHHHCCCCCCCCCEEEEEECCCEEEEEECCCCHHHHHHHHCCCCCHHHCCCCCCCC DFTATYAVSKQLSLIGQVSNMTHSRITSVTGPGQNLLKDSYSVPTTYWVGLRFTPTL EEEEEHHHHHHHHHHHHHHCCCHHHHEECCCCCHHHHHCCCCCCEEEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA