Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84622483
Identifier: 84622483
GI number: 84622483
Start: 898360
End: 898812
Strand: Direct
Name: 84622483
Synonym: XOO_0826
Alternate gene names: NA
Gene position: 898360-898812 (Clockwise)
Preceding gene: 84622482
Following gene: 84622484
Centisome position: 18.18
GC content: 63.36
Gene sequence:
>453_bases ATGGTCAGCTCTATTTCCGCAGGACACCGTGCGCTACCTCCTCGCCGGCGCGCGCTTGCGAATTGCTGCTACCTACTCAC CGTTACAAACTGCCAGCGGCAACGCATCGTCGACGATTTTCAGCTGGCCGCTTCAGCGTGCCGCGTTTTCATCGCCGCGC TGCAAGAAGATGCTGCGTTGCCGGCCTGGGTGCTGATGCCGGACCATGTTCACTGGCTGGTGCAGTTGGGGAATGTCACT CCGCTGGCGCGGGTCGTGTCTTGCATGAAGACGGCAAGCACGCGTGCAGTCAACCAGCAACGCTGGGTGCCTGCCGCAGT CTGGGCGCGGGCCTACCACGACCGCGGCTTGCGCAAGGAGACGATCTGCGCAGCGTGGCTGGTGACCTCATCGCCAATCC GCTACGCGCCGGACTGGTCGAGCGGGTCGGCGATTCCCCATTCTGGGATGTAA
Upstream 100 bases:
>100_bases CATCGCGCGCAAGCGCGCTCCGAGGTTTCGGAAGTTTCCTCACCGACGCGAGCGTCCGACTCCGATGCAAGCATTTGCAT GGCTGGGCCAGCATGCATCC
Downstream 100 bases:
>100_bases TCTGGCTGGCGTAGGAGCGCGCTAGCGCGCGATGGAGTATTACCGAAAAAGTCCGGTAGCGCGCAAGCGCGCTCCTACGC AGGCCCCGGATTCCCATGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MVSSISAGHRALPPRRRALANCCYLLTVTNCQRQRIVDDFQLAASACRVFIAALQEDAALPAWVLMPDHVHWLVQLGNVT PLARVVSCMKTASTRAVNQQRWVPAAVWARAYHDRGLRKETICAAWLVTSSPIRYAPDWSSGSAIPHSGM
Sequences:
>Translated_150_residues MVSSISAGHRALPPRRRALANCCYLLTVTNCQRQRIVDDFQLAASACRVFIAALQEDAALPAWVLMPDHVHWLVQLGNVT PLARVVSCMKTASTRAVNQQRWVPAAVWARAYHDRGLRKETICAAWLVTSSPIRYAPDWSSGSAIPHSGM >Mature_150_residues MVSSISAGHRALPPRRRALANCCYLLTVTNCQRQRIVDDFQLAASACRVFIAALQEDAALPAWVLMPDHVHWLVQLGNVT PLARVVSCMKTASTRAVNQQRWVPAAVWARAYHDRGLRKETICAAWLVTSSPIRYAPDWSSGSAIPHSGM
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16578; Mature: 16578
Theoretical pI: Translated: 9.85; Mature: 9.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 6.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSSISAGHRALPPRRRALANCCYLLTVTNCQRQRIVDDFQLAASACRVFIAALQEDAAL CCCCCCCCCCCCCHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PAWVLMPDHVHWLVQLGNVTPLARVVSCMKTASTRAVNQQRWVPAAVWARAYHDRGLRKE CEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHH TICAAWLVTSSPIRYAPDWSSGSAIPHSGM HHHHHHHHHCCCCEECCCCCCCCCCCCCCC >Mature Secondary Structure MVSSISAGHRALPPRRRALANCCYLLTVTNCQRQRIVDDFQLAASACRVFIAALQEDAAL CCCCCCCCCCCCCHHHHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PAWVLMPDHVHWLVQLGNVTPLARVVSCMKTASTRAVNQQRWVPAAVWARAYHDRGLRKE CEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHH TICAAWLVTSSPIRYAPDWSSGSAIPHSGM HHHHHHHHHCCCCEECCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA