Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84622408
Identifier: 84622408
GI number: 84622408
Start: 810761
End: 811309
Strand: Direct
Name: 84622408
Synonym: XOO_0751
Alternate gene names: NA
Gene position: 810761-811309 (Clockwise)
Preceding gene: 84622407
Following gene: 84622418
Centisome position: 16.41
GC content: 61.57
Gene sequence:
>549_bases ATGCGCGATAGCGCACATGCGCCGATCTCGGTACATGAAGTCGCGCAGCGCTTGCCCGCAAGGACGTATCGGCAGGTCAG CTGGCGCCAGGGCAGCGACGCAACGCTCAGTTCGCGGTTCGCGGCGGTGCGGGTTCGTGCCGCACACAATCGCCAGGCAC ATGACGAGCAGTGGCTGCTGATCGAGTGGCCGCCGGGAGAGTCCGAGCCCCGCCACTACTGGTTCTCGACGCTACCAAAG CAAACGCCGGTCAAGACACTGGTTGCCACGGCACAAGGCCGATGGCGGATTGAACGCGATTATCAGGAGCTGAAGTCGGA GTTGGGCCTGCATCACTATGAAGGGCGCAACTGGCGTGGTTTTCACCATCACGCCAGTCTGTGCATCGCCGCATACGGGT TCTTGATGCGCGAGCGCCTGCGCAGTAAAAAAAACTCCGTCGCATTCAAGATGCCTGCAGTATCCAAAAGTGTCCGCCCG CGCCGGTCTGGCCCCAATGCAACGTCACCATCCCAACTCGATTGCCACGCTGGCCTTCGGACTGGCTAG
Upstream 100 bases:
>100_bases GCTCAATACCAGCTTGCAGTTCATCCACCTGGCGTTCCTGGCACTGCTGCTCAGGAGATCGTGAACAGGCTCTAAGGGCG GTCGGCCCCGCACACGACCG
Downstream 100 bases:
>100_bases GCTTATCGCCAGAAGCCTCCCACACTGCCCGTGTTGCGGGGTCTCACCGTACCAACGGATTCAGATTTAGTAACACAGTA GAACTAGATCGACGCTCGCA
Product: ISXo8 transposase
Products: NA
Alternate protein names: ISXo8 Transposase; IS4 Family Transposase; Transposase IS4 Family Protein; ISRSO17-Transposase Protein; Transposase-Like Protein; Transposase ISRS
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MRDSAHAPISVHEVAQRLPARTYRQVSWRQGSDATLSSRFAAVRVRAAHNRQAHDEQWLLIEWPPGESEPRHYWFSTLPK QTPVKTLVATAQGRWRIERDYQELKSELGLHHYEGRNWRGFHHHASLCIAAYGFLMRERLRSKKNSVAFKMPAVSKSVRP RRSGPNATSPSQLDCHAGLRTG
Sequences:
>Translated_182_residues MRDSAHAPISVHEVAQRLPARTYRQVSWRQGSDATLSSRFAAVRVRAAHNRQAHDEQWLLIEWPPGESEPRHYWFSTLPK QTPVKTLVATAQGRWRIERDYQELKSELGLHHYEGRNWRGFHHHASLCIAAYGFLMRERLRSKKNSVAFKMPAVSKSVRP RRSGPNATSPSQLDCHAGLRTG >Mature_182_residues MRDSAHAPISVHEVAQRLPARTYRQVSWRQGSDATLSSRFAAVRVRAAHNRQAHDEQWLLIEWPPGESEPRHYWFSTLPK QTPVKTLVATAQGRWRIERDYQELKSELGLHHYEGRNWRGFHHHASLCIAAYGFLMRERLRSKKNSVAFKMPAVSKSVRP RRSGPNATSPSQLDCHAGLRTG
Specific function: Unknown
COG id: COG5659
COG function: function code L; FOG: Transposase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20912; Mature: 20912
Theoretical pI: Translated: 11.25; Mature: 11.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRDSAHAPISVHEVAQRLPARTYRQVSWRQGSDATLSSRFAAVRVRAAHNRQAHDEQWLL CCCCCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHEEHHHHCCCCCCCCEEE IEWPPGESEPRHYWFSTLPKQTPVKTLVATAQGRWRIERDYQELKSELGLHHYEGRNWRG EECCCCCCCCCHHHHHHCCCCCHHHHHHHHCCCCEEEHHHHHHHHHHCCCEECCCCCCCC FHHHASLCIAAYGFLMRERLRSKKNSVAFKMPAVSKSVRPRRSGPNATSPSQLDCHAGLR HHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TG CC >Mature Secondary Structure MRDSAHAPISVHEVAQRLPARTYRQVSWRQGSDATLSSRFAAVRVRAAHNRQAHDEQWLL CCCCCCCCCHHHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHEEHHHHCCCCCCCCEEE IEWPPGESEPRHYWFSTLPKQTPVKTLVATAQGRWRIERDYQELKSELGLHHYEGRNWRG EECCCCCCCCCHHHHHHCCCCCHHHHHHHHCCCCEEEHHHHHHHHHHCCCEECCCCCCCC FHHHASLCIAAYGFLMRERLRSKKNSVAFKMPAVSKSVRPRRSGPNATSPSQLDCHAGLR HHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC TG CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA