Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84622340
Identifier: 84622340
GI number: 84622340
Start: 734851
End: 735885
Strand: Direct
Name: 84622340
Synonym: XOO_0683
Alternate gene names: NA
Gene position: 734851-735885 (Clockwise)
Preceding gene: 84622339
Following gene: 84622345
Centisome position: 14.87
GC content: 65.51
Gene sequence:
>1035_bases ATGGAAGCAACCGACATGAGATCGTTGTCGCGCGACGCGCGGCACGAAAGGCGCGTGCAGGTCATTCGACTGCGCAAGGC GGGCCAGACCTACGACGAGATCGCGGCGCAGACTGGGTTGAGCCGCACGGGTGTGTTCGACATCTGCAAGCGTCACGATG TGGCAGGGGCCAAGGCTTTGCGCGACGCGCCCAGCGGGCGTCGCAGCGGCGACGGCCGGCTGCTCGACGCGGCGCAGGAA GCTTTGGTGCGCAAGCTCATTACCGACAAGACGCCTGACCAGTTGAAGATGCCCTACGCGCTGTGGACGCGCGCGGCGGT GTCGCAGCTCATCGAGCAGCGCTTTGGCATTCGCCTGCCGGTGCGCACGATGGGGCTGTACCTGGCGCGCTGGGGCTTCA CGCCGCAAAAGCCGATGAAGAAGGCCTACGAACAATCACCCGCCGCAGTCCGGAAGTGGCTCGACGAGGACTACCCGGTC ATTGCCGCTCGTGCCAAGGCCGAGGGCGCCGAGATTCACTGGGGCGACGAGAGCGGCCTGCGCAGCGACGACGTGCGCGG GCGCGGCTTCGCCCCGAAAGGCCAGACGCCTGTGATCCGGGTCAACAGCAAGCGCCACGGCCTGTCGGTGATCTCCACCG TGACCAACAAGGGCCAGATGCGCTGGCGCATCTTCGACGGCGCGCTCAATACGAACATCCTGATCGACTTCCTGCGCCGG CTGATCAAGGGGGCGAGCAAGAAGCTGTTCCTGATCCTGGACAACCTGCGGGTACACCACGCCAAGCCCGTCAAGGCGTG GCTGGCCGAGCACGCCGATGCGATCGAGGTGTTCTACCTGCCCAGCTACAGCCCCGAACTCAACCCCGACGAAATGGCCA ACGCCGACATCAAGCAAGCCGTCACGACGCTGGCGCCAGCGCGCACAAAGCTGCAACTGGTCAAGGCCACCGCACGCCAC CTTCGCAGCGTGCAGCGCCAGCCTGAGCGGATTCGCAAATACTTCGAGCATGGGCCGGTTCGCTATGCGGCTTGA
Upstream 100 bases:
>100_bases CTTGTCAGCAACACTGCTGGACTCGATCACCCGCAGTGCTTTGCTATTGATTAGGAAGTAGTTAACTTGAACTTCTCGTG GACGCCATCATCTCAGGATG
Downstream 100 bases:
>100_bases TTCAAGTTGGTTGATGCCGGATCAATAAGAGCGGCCAACAAAACGACTGCGTAGCCGCCAGGCGGGCGCGGCCTGTGCTC GGAATCGGCATGTACCACGC
Product: ISXo7 transposase
Products: NA
Alternate protein names: ISXo7 Transposase; Transposase And Inactivated Derivatives; ISXoo2 Transposase; Helix-Turn-Helix Type; Integrase Catalytic Region; Transposase Of IS; Transposase And Inactivated Derivatives-Like Protein; Phosphoadenosine Phosphosulfate Reductase; Cation Diffusion Facilitator Family Transporter; Transposase ISC; Isxo7 Transposase; ISAfe6 Transposase Degenerate; Transposase IS; Transposase Fragmentary Gene
Number of amino acids: Translated: 344; Mature: 344
Protein sequence:
>344_residues MEATDMRSLSRDARHERRVQVIRLRKAGQTYDEIAAQTGLSRTGVFDICKRHDVAGAKALRDAPSGRRSGDGRLLDAAQE ALVRKLITDKTPDQLKMPYALWTRAAVSQLIEQRFGIRLPVRTMGLYLARWGFTPQKPMKKAYEQSPAAVRKWLDEDYPV IAARAKAEGAEIHWGDESGLRSDDVRGRGFAPKGQTPVIRVNSKRHGLSVISTVTNKGQMRWRIFDGALNTNILIDFLRR LIKGASKKLFLILDNLRVHHAKPVKAWLAEHADAIEVFYLPSYSPELNPDEMANADIKQAVTTLAPARTKLQLVKATARH LRSVQRQPERIRKYFEHGPVRYAA
Sequences:
>Translated_344_residues MEATDMRSLSRDARHERRVQVIRLRKAGQTYDEIAAQTGLSRTGVFDICKRHDVAGAKALRDAPSGRRSGDGRLLDAAQE ALVRKLITDKTPDQLKMPYALWTRAAVSQLIEQRFGIRLPVRTMGLYLARWGFTPQKPMKKAYEQSPAAVRKWLDEDYPV IAARAKAEGAEIHWGDESGLRSDDVRGRGFAPKGQTPVIRVNSKRHGLSVISTVTNKGQMRWRIFDGALNTNILIDFLRR LIKGASKKLFLILDNLRVHHAKPVKAWLAEHADAIEVFYLPSYSPELNPDEMANADIKQAVTTLAPARTKLQLVKATARH LRSVQRQPERIRKYFEHGPVRYAA >Mature_344_residues MEATDMRSLSRDARHERRVQVIRLRKAGQTYDEIAAQTGLSRTGVFDICKRHDVAGAKALRDAPSGRRSGDGRLLDAAQE ALVRKLITDKTPDQLKMPYALWTRAAVSQLIEQRFGIRLPVRTMGLYLARWGFTPQKPMKKAYEQSPAAVRKWLDEDYPV IAARAKAEGAEIHWGDESGLRSDDVRGRGFAPKGQTPVIRVNSKRHGLSVISTVTNKGQMRWRIFDGALNTNILIDFLRR LIKGASKKLFLILDNLRVHHAKPVKAWLAEHADAIEVFYLPSYSPELNPDEMANADIKQAVTTLAPARTKLQLVKATARH LRSVQRQPERIRKYFEHGPVRYAA
Specific function: Unknown
COG id: COG3335
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38886; Mature: 38886
Theoretical pI: Translated: 10.93; Mature: 10.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEATDMRSLSRDARHERRVQVIRLRKAGQTYDEIAAQTGLSRTGVFDICKRHDVAGAKAL CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHCCCHHHHHH RDAPSGRRSGDGRLLDAAQEALVRKLITDKTPDQLKMPYALWTRAAVSQLIEQRFGIRLP HCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCCCC VRTMGLYLARWGFTPQKPMKKAYEQSPAAVRKWLDEDYPVIAARAKAEGAEIHWGDESGL HHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHCCCCCEEEEECCCCCCEEEECCCCCC RSDDVRGRGFAPKGQTPVIRVNSKRHGLSVISTVTNKGQMRWRIFDGALNTNILIDFLRR CCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHH LIKGASKKLFLILDNLRVHHAKPVKAWLAEHADAIEVFYLPSYSPELNPDEMANADIKQA HHHCCCCEEEEEEECCHHCCCCHHHHHHHCCCCEEEEEEECCCCCCCCHHHHCCHHHHHH VTTLAPARTKLQLVKATARHLRSVQRQPERIRKYFEHGPVRYAA HHHHCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCEECCC >Mature Secondary Structure MEATDMRSLSRDARHERRVQVIRLRKAGQTYDEIAAQTGLSRTGVFDICKRHDVAGAKAL CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCHHHHHHHCCCHHHHHH RDAPSGRRSGDGRLLDAAQEALVRKLITDKTPDQLKMPYALWTRAAVSQLIEQRFGIRLP HCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHCCCCCC VRTMGLYLARWGFTPQKPMKKAYEQSPAAVRKWLDEDYPVIAARAKAEGAEIHWGDESGL HHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHCCCCCEEEEECCCCCCEEEECCCCCC RSDDVRGRGFAPKGQTPVIRVNSKRHGLSVISTVTNKGQMRWRIFDGALNTNILIDFLRR CCCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHH LIKGASKKLFLILDNLRVHHAKPVKAWLAEHADAIEVFYLPSYSPELNPDEMANADIKQA HHHCCCCEEEEEEECCHHCCCCHHHHHHHCCCCEEEEEEECCCCCCCCHHHHCCHHHHHH VTTLAPARTKLQLVKATARHLRSVQRQPERIRKYFEHGPVRYAA HHHHCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA