Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
---|---|
Accession | NC_007705 |
Length | 4,940,217 |
Click here to switch to the map view.
The map label for this gene is 84622144
Identifier: 84622144
GI number: 84622144
Start: 533867
End: 534076
Strand: Direct
Name: 84622144
Synonym: XOO_0487
Alternate gene names: NA
Gene position: 533867-534076 (Clockwise)
Preceding gene: 84622143
Following gene: 84622145
Centisome position: 10.81
GC content: 66.67
Gene sequence:
>210_bases GTGCATGCGGCCCAGCGGGTCGAACTGGCCGCCAATGCGCGCGTGCAGGGCAATGTGCATTACCAGGTAGTGGAAATGAG TGTCGGTGCGCAACTCACCGGGCGGCTGATTCACGCTGCCACTGCAGCGGCAACCGCGGCGTCGCCGGCGCCGGAAACCA GCCGTGCCGAGCCGTTCACCGCGCTACAGGCTGAAATCGCCGACGTCTGA
Upstream 100 bases:
>100_bases AGAAGGCACCAGCGCCACCTTGACGGTGGCCGAGCAGGGCAGCATCGAAGGCGAAGTGCGCGCCCCGGTTGTGATCATCA ACGGCTAGCTGACCGGCGAT
Downstream 100 bases:
>100_bases CTAGAGCGTGCGCGGTGAACGTCCCCGCAGCCATGGCTTGAAGTGGGAACGTCTGGCCCCCATGCTTACGGCATGAGTAC GCTCGTTTCCCTTCCCACCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 69; Mature: 69
Protein sequence:
>69_residues MHAAQRVELAANARVQGNVHYQVVEMSVGAQLTGRLIHAATAAATAASPAPETSRAEPFTALQAEIADV
Sequences:
>Translated_69_residues MHAAQRVELAANARVQGNVHYQVVEMSVGAQLTGRLIHAATAAATAASPAPETSRAEPFTALQAEIADV >Mature_69_residues MHAAQRVELAANARVQGNVHYQVVEMSVGAQLTGRLIHAATAAATAASPAPETSRAEPFTALQAEIADV
Specific function: Unknown
COG id: COG1664
COG function: function code M; Integral membrane protein CcmA involved in cell shape determination
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7138; Mature: 7138
Theoretical pI: Translated: 6.22; Mature: 6.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHAAQRVELAANARVQGNVHYQVVEMSVGAQLTGRLIHAATAAATAASPAPETSRAEPFT CCCCCCEEECCCCEECCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCH ALQAEIADV HHHEEECCC >Mature Secondary Structure MHAAQRVELAANARVQGNVHYQVVEMSVGAQLTGRLIHAATAAATAASPAPETSRAEPFT CCCCCCEEECCCCEECCCEEEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCH ALQAEIADV HHHEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA