Definition | Xanthomonas oryzae pv. oryzae MAFF 311018, complete genome. |
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Accession | NC_007705 |
Length | 4,940,217 |
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The map label for this gene is 84622142
Identifier: 84622142
GI number: 84622142
Start: 533008
End: 533640
Strand: Direct
Name: 84622142
Synonym: XOO_0485
Alternate gene names: NA
Gene position: 533008-533640 (Clockwise)
Preceding gene: 84622137
Following gene: 84622143
Centisome position: 10.79
GC content: 64.3
Gene sequence:
>633_bases ATGGCCACGCGCACCGCCGCCCCCCGCCTGGTGGAAGCCGAGGCAGCGCTGCAGCAGGCGCAACGCAGCCAAGCCCAGCA GCGGCGGCAGATCGAGCAGTTGCAGCAGCGCCAGGTCAACCTGGCGATGTCGGACAAGATCAGCCGCGCGGCCAATATCG AAGTGCAGGCTTCGCTGGCCGAGCGCGATGAGCAGATCGCCGCACTGCGTGCCGACGTGGCTTTCTATGAGCGCCTGGTG GGCTCCACCGCGCAGCGCAAGGGGCTCAATGCGCACTCGGTGCAGTTCACTGCCGAGGCCGGCGGTACCTGGAATTACAG CGTGGTGCTCACCCAGAACCTCAACCGTGGCGCGATCAGCCAGGGCCAGCTGCGTTTTGTAGTGGAAGGCGTGCGCGCCG GCAAGTTGGTGACGGTGAGCTGGAACGAGCTGCACCAAAAGCCCAATGCTGCCGGGCAACCGTACTCGTTCCGCTATTTC CAGCAGCTGGACGGCAGCGTGATCCTGCCGAAGGATTTCACCCCGCAACGTGTCAACATCTCTCTGAGCGGCGATGGGGC GCCGGTCAATCAGACATTCGATTGGAAAGTCGCCGGCAATGGCGCGGGGGGAGTAGCTCATGTTCGGGAATAA
Upstream 100 bases:
>100_bases GATCGTCCAACGTGATTCCGGCGGTGGCCGTTCCAGTGGCCGCTGGCTGTGCTTGGTGGTCGCCGTCGTATGGTTGGCCT CGCTGGGCGGGGTGTGGTGG
Downstream 100 bases:
>100_bases GTCCAACCGTGGTGCGCAGACCGTTGTCGATACCTTGATCGGGCCGCAGGTGGTCATCCGCGGCGACCTGCTGTTCAGCG GAGGCCTGTATGTGGAAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 210; Mature: 209
Protein sequence:
>210_residues MATRTAAPRLVEAEAALQQAQRSQAQQRRQIEQLQQRQVNLAMSDKISRAANIEVQASLAERDEQIAALRADVAFYERLV GSTAQRKGLNAHSVQFTAEAGGTWNYSVVLTQNLNRGAISQGQLRFVVEGVRAGKLVTVSWNELHQKPNAAGQPYSFRYF QQLDGSVILPKDFTPQRVNISLSGDGAPVNQTFDWKVAGNGAGGVAHVRE
Sequences:
>Translated_210_residues MATRTAAPRLVEAEAALQQAQRSQAQQRRQIEQLQQRQVNLAMSDKISRAANIEVQASLAERDEQIAALRADVAFYERLV GSTAQRKGLNAHSVQFTAEAGGTWNYSVVLTQNLNRGAISQGQLRFVVEGVRAGKLVTVSWNELHQKPNAAGQPYSFRYF QQLDGSVILPKDFTPQRVNISLSGDGAPVNQTFDWKVAGNGAGGVAHVRE >Mature_209_residues ATRTAAPRLVEAEAALQQAQRSQAQQRRQIEQLQQRQVNLAMSDKISRAANIEVQASLAERDEQIAALRADVAFYERLVG STAQRKGLNAHSVQFTAEAGGTWNYSVVLTQNLNRGAISQGQLRFVVEGVRAGKLVTVSWNELHQKPNAAGQPYSFRYFQ QLDGSVILPKDFTPQRVNISLSGDGAPVNQTFDWKVAGNGAGGVAHVRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22999; Mature: 22868
Theoretical pI: Translated: 10.30; Mature: 10.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATRTAAPRLVEAEAALQQAQRSQAQQRRQIEQLQQRQVNLAMSDKISRAANIEVQASLA CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCEEEEEHHH ERDEQIAALRADVAFYERLVGSTAQRKGLNAHSVQFTAEAGGTWNYSVVLTQNLNRGAIS HHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCEEEEEECCCCCEEEEEEEEECCCCCCCC QGQLRFVVEGVRAGKLVTVSWNELHQKPNAAGQPYSFRYFQQLDGSVILPKDFTPQRVNI CCCEEEEEECCCCCEEEEEEHHHHHCCCCCCCCCCCCHHHHHCCCCEECCCCCCCCEEEE SLSGDGAPVNQTFDWKVAGNGAGGVAHVRE EECCCCCCCCCEEEEEEECCCCCCCCCCCC >Mature Secondary Structure ATRTAAPRLVEAEAALQQAQRSQAQQRRQIEQLQQRQVNLAMSDKISRAANIEVQASLA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCEEEEEHHH ERDEQIAALRADVAFYERLVGSTAQRKGLNAHSVQFTAEAGGTWNYSVVLTQNLNRGAIS HHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCEEEEEECCCCCEEEEEEEEECCCCCCCC QGQLRFVVEGVRAGKLVTVSWNELHQKPNAAGQPYSFRYFQQLDGSVILPKDFTPQRVNI CCCEEEEEECCCCCEEEEEEHHHHHCCCCCCCCCCCCHHHHHCCCCEECCCCCCCCEEEE SLSGDGAPVNQTFDWKVAGNGAGGVAHVRE EECCCCCCCCCEEEEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA